Click here to switch to the map view.

The map label for this gene is 150397826

Identifier: 150397826

GI number: 150397826

Start: 2728907

End: 2729977

Strand: Reverse

Name: 150397826

Synonym: Smed_2628

Alternate gene names: NA

Gene position: 2729977-2728907 (Counterclockwise)

Preceding gene: 150397827

Following gene: 150397825

Centisome position: 72.19

GC content: 63.31

Gene sequence:

>1071_bases
ATGAAGGGCAGTATCGCTACATCTGCTGTCCTCCACGCCCTGGTTCTGACCTGGGCGCTGGTGTCGCTTGGCAGCCCGGC
CGATTTCGAGGTCGCGGATGTCGAGGCCTTGCCGGTCGACATCGTACCTGTCGAGTCGATTACCCAGATACAGCAGGGCG
ACAAGAAGGCTCCGGCCAGGGAAAAGGCTTCGCCGGTTCCGACCAAGAAGCCGACGCCGGTCGAAAACGCCGAGAATGTC
GGCGAGAACGACGTCGACCTGAAAACACCGCCCACGCCCAATGCCAAGCCGGTCGACAACGAGTCGGCCGCAGCACCGCA
GAAAACCGAAAAGGCTCCGCCGACGCCCGATCCCGTGAAGGAAGAGATCGAGAAGGTCGAAGAGACGAAGCCTGCGGCAG
AGCCCGCGACGGAAGTGGCGGCACTGCCCGAACCCAAGCAGGAAGTGAAGCCGGACACGAAGCCGGAGCCCGCGCCGGCG
GAAGAGCAGCCTACGGAAAATCCCGAGGCTGAGGCTCTGCCGGACAAGGTGCCGACGCCGCAGGTAAAGCCGAAGGTCGA
AAAGCCGGCGCAGACGGCCAAGACCCCCGAGCGCAAGAAGGATGAAGTCCAGAAGGAGCAGAAGAAGGCGTCCTCGCAGA
AGGAGAGCGACTTCAACGCCGACGAAATCGCGGCGCTGCTCAACAAGCAGGAGTCTTCGGGCGGTGGCGCCAAGCGCTCG
ACCGAGGAAGCGGCTCTCGGTGGCAAGAAGACGACGACGGGAAACACCCTTTCGCAAAGCGAAATGGATGCACTTCGCGG
CCAGATCCAAAACAACTGGTCGATCATCCCCGGCATGGCCGACGCGGCGGATGTCCGCATCAAGGTGAGGATGCGGCTCG
ACCCGAACGGGGAGCTGATCGGCGATCCGGAGGTGGAGGCCAGCGGCGGTTCGGATTCGGCGCGGCGGGCGCTCATGGGT
GGTGCGCGTCGCGCCATCCTGAAATCGGCCCCCTTCAAGGGACTGCCGGCTGAAAAATATGATTCGTGGAGCGAGGTCGT
CGTCAACTTTGACCCGAGCTCGATGCTCTAG

Upstream 100 bases:

>100_bases
ATTACGGCACCGTGATGCAGGTGATGGCGCGCATCTCCGCGGCAGGCTTCAAGAACCTGGGTCTGGTAACGCTTCAAGAA
CAAGAGAAGTGAACATCTGA

Downstream 100 bases:

>100_bases
ACAAGGCGAGCGGGATGCGGCGCGGTCCCATCCTGCTCGGGAAACGAAAGGCTGAAAGGCTTCATGGAAATGCTGAGACG
CAATTTTTTCCGCCTTCTGA

Product: putative signal peptide protein

Products: NA

Alternate protein names: LA TolA Protein; LA Protein; Outer Membrane Protein; LA Outer Membrane Protein

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKGSIATSAVLHALVLTWALVSLGSPADFEVADVEALPVDIVPVESITQIQQGDKKAPAREKASPVPTKKPTPVENAENV
GENDVDLKTPPTPNAKPVDNESAAAPQKTEKAPPTPDPVKEEIEKVEETKPAAEPATEVAALPEPKQEVKPDTKPEPAPA
EEQPTENPEAEALPDKVPTPQVKPKVEKPAQTAKTPERKKDEVQKEQKKASSQKESDFNADEIAALLNKQESSGGGAKRS
TEEAALGGKKTTTGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKVRMRLDPNGELIGDPEVEASGGSDSARRALMG
GARRAILKSAPFKGLPAEKYDSWSEVVVNFDPSSML

Sequences:

>Translated_356_residues
MKGSIATSAVLHALVLTWALVSLGSPADFEVADVEALPVDIVPVESITQIQQGDKKAPAREKASPVPTKKPTPVENAENV
GENDVDLKTPPTPNAKPVDNESAAAPQKTEKAPPTPDPVKEEIEKVEETKPAAEPATEVAALPEPKQEVKPDTKPEPAPA
EEQPTENPEAEALPDKVPTPQVKPKVEKPAQTAKTPERKKDEVQKEQKKASSQKESDFNADEIAALLNKQESSGGGAKRS
TEEAALGGKKTTTGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKVRMRLDPNGELIGDPEVEASGGSDSARRALMG
GARRAILKSAPFKGLPAEKYDSWSEVVVNFDPSSML
>Mature_356_residues
MKGSIATSAVLHALVLTWALVSLGSPADFEVADVEALPVDIVPVESITQIQQGDKKAPAREKASPVPTKKPTPVENAENV
GENDVDLKTPPTPNAKPVDNESAAAPQKTEKAPPTPDPVKEEIEKVEETKPAAEPATEVAALPEPKQEVKPDTKPEPAPA
EEQPTENPEAEALPDKVPTPQVKPKVEKPAQTAKTPERKKDEVQKEQKKASSQKESDFNADEIAALLNKQESSGGGAKRS
TEEAALGGKKTTTGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKVRMRLDPNGELIGDPEVEASGGSDSARRALMG
GARRAILKSAPFKGLPAEKYDSWSEVVVNFDPSSML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37896; Mature: 37896

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSIATSAVLHALVLTWALVSLGSPADFEVADVEALPVDIVPVESITQIQQGDKKAPAR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEECHHHHHHHHHCCCCCCCH
EKASPVPTKKPTPVENAENVGENDVDLKTPPTPNAKPVDNESAAAPQKTEKAPPTPDPVK
HCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
EEIEKVEETKPAAEPATEVAALPEPKQEVKPDTKPEPAPAEEQPTENPEAEALPDKVPTP
HHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
QVKPKVEKPAQTAKTPERKKDEVQKEQKKASSQKESDFNADEIAALLNKQESSGGGAKRS
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
TEEAALGGKKTTTGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKVRMRLDPNGELI
CHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEEEECCCCCCC
GDPEVEASGGSDSARRALMGGARRAILKSAPFKGLPAEKYDSWSEVVVNFDPSSML
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKGSIATSAVLHALVLTWALVSLGSPADFEVADVEALPVDIVPVESITQIQQGDKKAPAR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEECHHHHHHHHHCCCCCCCH
EKASPVPTKKPTPVENAENVGENDVDLKTPPTPNAKPVDNESAAAPQKTEKAPPTPDPVK
HCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
EEIEKVEETKPAAEPATEVAALPEPKQEVKPDTKPEPAPAEEQPTENPEAEALPDKVPTP
HHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
QVKPKVEKPAQTAKTPERKKDEVQKEQKKASSQKESDFNADEIAALLNKQESSGGGAKRS
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
TEEAALGGKKTTTGNTLSQSEMDALRGQIQNNWSIIPGMADAADVRIKVRMRLDPNGELI
CHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEEEECCCCCCC
GDPEVEASGGSDSARRALMGGARRAILKSAPFKGLPAEKYDSWSEVVVNFDPSSML
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA