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The map label for this gene is glxA [H]

Identifier: 150397797

GI number: 150397797

Start: 2695628

End: 2696659

Strand: Direct

Name: glxA [H]

Synonym: Smed_2599

Alternate gene names: 150397797

Gene position: 2695628-2696659 (Clockwise)

Preceding gene: 150397794

Following gene: 150397800

Centisome position: 71.28

GC content: 56.69

Gene sequence:

>1032_bases
ATGAGTGTCGTGAGTGACAAACTTCAGGGTGATATGGACAAAACGAAGGATATTCACGAAGTCGGCATCGTTGGCTACAA
GGGGGCTCAGGCTGCCGCGGTGCTTGGAATGACCGATCTTCTGACCGCCGCAGACGGCTTTGCACGTAAAATGCATGCCA
TTGATCACCCCCTACTTCGCGTGAGTCACTGGACACGCGAAGATGGGCGGGCTGCGCCTGAGCGGCTGTTCGATTCCGAC
CCTGGCATAGGTGGCAGCAGGCCAACCGTCATCGTCATCCCTCCAGGGCTTGGCGATCCGCTCCCCGAGCACGAAGCGAA
ATTCTACGCCGACTGGCTTCTTTCAGAACATTCGAGAGGAGCAGCTTTGTGCTCGATCTGCAAAGGAGCCTTCCTGTTGG
GAGAGACCGGGCTTCTTGCGGGCCGGACAGTGACCACTCACTGGACCTATGAGGAGCAGCTTGCCTCTCGATTTCCCGAC
ATCAAGGTGAACACCGACCGTCTGATCATAGACGATGGCGACATACTCACGGCCGGCGGCGTGATGGCATGGATCGATCT
CAGTCTGATTCTGATCGAGCGTTTTCTCGGCCCGAACATCATGGTGGAAACAGCAGGAGCTTTCCTGGTTGATCCACCGG
GACGCAAACAAAGTTACTACAGGGGCTTCTCGCCACGTCTCAATCATGGTGACGATTCGATCTTGAAGGTTCAGCACTGG
CTTCAACTCACCGGCGGGAAAGAGATGAGACTTGCGGCCCTCGCGGAGCAGGCAGGCCTTGAACCGCGTACCTTTATGCG
GCGATTCCAGAAAGCAACCGGCCATACGGCAGGCGAATATGTTCAACGTCTGCGTATCAACCGGGCACGTGACCTGCTCC
AGCTGACACGCGATCCCATCGATTCAATCGCCTGGGATGTTCACTACAGCGATCCCAGCGCCTTTCGACGAATCTTCACG
CGGATCATCGGTCTGAGCCCAACTGAGTATCGCCGAAGATTTCGCGCAGGGCCGAACGGAAATGGGACTTGA

Upstream 100 bases:

>100_bases
CAGGTAGTCTTTCTGAAGATCGACAACGATTACCGCGCGCTTGCTCATGAGCATCCTTTCCGAAGTTGATGCGCCTGTAT
AATGAGGGCTAAGGCATCGT

Downstream 100 bases:

>100_bases
GCGTGCCGGGGGACGGGCGGAAGCACTCTCGTCCGCACAGGCGCGCGTCGATCAATGACAAAAGCAGAGCTGCAGGTGGA
ATGGCCAGATCCGCTGCAGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MSVVSDKLQGDMDKTKDIHEVGIVGYKGAQAAAVLGMTDLLTAADGFARKMHAIDHPLLRVSHWTREDGRAAPERLFDSD
PGIGGSRPTVIVIPPGLGDPLPEHEAKFYADWLLSEHSRGAALCSICKGAFLLGETGLLAGRTVTTHWTYEEQLASRFPD
IKVNTDRLIIDDGDILTAGGVMAWIDLSLILIERFLGPNIMVETAGAFLVDPPGRKQSYYRGFSPRLNHGDDSILKVQHW
LQLTGGKEMRLAALAEQAGLEPRTFMRRFQKATGHTAGEYVQRLRINRARDLLQLTRDPIDSIAWDVHYSDPSAFRRIFT
RIIGLSPTEYRRRFRAGPNGNGT

Sequences:

>Translated_343_residues
MSVVSDKLQGDMDKTKDIHEVGIVGYKGAQAAAVLGMTDLLTAADGFARKMHAIDHPLLRVSHWTREDGRAAPERLFDSD
PGIGGSRPTVIVIPPGLGDPLPEHEAKFYADWLLSEHSRGAALCSICKGAFLLGETGLLAGRTVTTHWTYEEQLASRFPD
IKVNTDRLIIDDGDILTAGGVMAWIDLSLILIERFLGPNIMVETAGAFLVDPPGRKQSYYRGFSPRLNHGDDSILKVQHW
LQLTGGKEMRLAALAEQAGLEPRTFMRRFQKATGHTAGEYVQRLRINRARDLLQLTRDPIDSIAWDVHYSDPSAFRRIFT
RIIGLSPTEYRRRFRAGPNGNGT
>Mature_342_residues
SVVSDKLQGDMDKTKDIHEVGIVGYKGAQAAAVLGMTDLLTAADGFARKMHAIDHPLLRVSHWTREDGRAAPERLFDSDP
GIGGSRPTVIVIPPGLGDPLPEHEAKFYADWLLSEHSRGAALCSICKGAFLLGETGLLAGRTVTTHWTYEEQLASRFPDI
KVNTDRLIIDDGDILTAGGVMAWIDLSLILIERFLGPNIMVETAGAFLVDPPGRKQSYYRGFSPRLNHGDDSILKVQHWL
QLTGGKEMRLAALAEQAGLEPRTFMRRFQKATGHTAGEYVQRLRINRARDLLQLTRDPIDSIAWDVHYSDPSAFRRIFTR
IIGLSPTEYRRRFRAGPNGNGT

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38011; Mature: 37880

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVSDKLQGDMDKTKDIHEVGIVGYKGAQAAAVLGMTDLLTAADGFARKMHAIDHPLLR
CCCCCHHHHCCHHHHCCHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VSHWTREDGRAAPERLFDSDPGIGGSRPTVIVIPPGLGDPLPEHEAKFYADWLLSEHSRG
HHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC
AALCSICKGAFLLGETGLLAGRTVTTHWTYEEQLASRFPDIKVNTDRLIIDDGDILTAGG
HHHHHHHHCHHEECCCCCEECCEEEEECCHHHHHHHHCCCCEECCCEEEEECCCEEECCC
VMAWIDLSLILIERFLGPNIMVETAGAFLVDPPGRKQSYYRGFSPRLNHGDDSILKVQHW
HHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHH
LQLTGGKEMRLAALAEQAGLEPRTFMRRFQKATGHTAGEYVQRLRINRARDLLQLTRDPI
HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
DSIAWDVHYSDPSAFRRIFTRIIGLSPTEYRRRFRAGPNGNGT
HHHEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVVSDKLQGDMDKTKDIHEVGIVGYKGAQAAAVLGMTDLLTAADGFARKMHAIDHPLLR
CCCCHHHHCCHHHHCCHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VSHWTREDGRAAPERLFDSDPGIGGSRPTVIVIPPGLGDPLPEHEAKFYADWLLSEHSRG
HHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCC
AALCSICKGAFLLGETGLLAGRTVTTHWTYEEQLASRFPDIKVNTDRLIIDDGDILTAGG
HHHHHHHHCHHEECCCCCEECCEEEEECCHHHHHHHHCCCCEECCCEEEEECCCEEECCC
VMAWIDLSLILIERFLGPNIMVETAGAFLVDPPGRKQSYYRGFSPRLNHGDDSILKVQHW
HHHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHH
LQLTGGKEMRLAALAEQAGLEPRTFMRRFQKATGHTAGEYVQRLRINRARDLLQLTRDPI
HHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
DSIAWDVHYSDPSAFRRIFTRIIGLSPTEYRRRFRAGPNGNGT
HHHEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]