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The map label for this gene is 150397794

Identifier: 150397794

GI number: 150397794

Start: 2693314

End: 2694087

Strand: Direct

Name: 150397794

Synonym: Smed_2596

Alternate gene names: NA

Gene position: 2693314-2694087 (Clockwise)

Preceding gene: 150397789

Following gene: 150397797

Centisome position: 71.22

GC content: 63.05

Gene sequence:

>774_bases
ATGGCAGCCAAACCCAGCGGCGCACAGGGCGACCGGCCTCGACGCCTGCGTGCGTCACCCCAGTCCGCACCACCTCAGTC
CGCACCACCCCAGTCCGCCTCACCCGAGTCTGCCCCACCCGAGTCTGGATCATCTGAGTCTTTGGAGGGGCCGCGCACTG
AACCATCCCTGTCTCTCGACCGGATCGTGGCGGCGGCGGTGGAACTGCTGGACACCAGGGGCGTCGACGGATTGAAGATG
CGTCAGCTGGCCGACCGTCTCGGTGCGGGCGCGATGAGCCTGTACTGGCATGTCGAAAATAAGGAAATGGTCTTCGATCT
GGCGCTCGACTCAGTGCTCGCATATCGCGGACCGCCGCAGAAAGCAGAGTCTCGGGACTGGCGCGGCGAAGTGTTTCATA
TGCTTGAAGACTGGCGCGCCAGCATGCTGCGCCATCCCTGGTCGGCGTCGCTGTTGCCGCGCCGGGCACTTGGCCCGAAC
ATTCTCAGCCGCCTGGAACTGCTGAGCAATACCTTGTCCAGGGCCGGTGTAGCGGACGCGGATCTGAATGCCGCGATATG
GTCGCTCTGGAACTATGTGATAGGCGCAACCGTCACGCGGGCGAGTTTCGTCCTCTCGGACGAGGACAGGTCCGTCGCGC
AGCAGCGCCTTACAGGTCTCGGCGAACACTATCCGACAATCGAACGCTCTCGGCTGCTGTTGGATGACGATTGGGACGGC
GCATTCAGGAAGGGTCTAGACTTCCTGCTCGACGGACTTGCTCCGAGATCATGA

Upstream 100 bases:

>100_bases
ACGAATAAATTGCATCGTACAACGTACGAGTCAATTGGTCAGGATCGACATTCGCCCCGGTGCCGGATTAAATCGGCGTA
TTGATCAGTAAGGAAGACGG

Downstream 100 bases:

>100_bases
ATGCCGGTCATTTGAACGCCAGGGTTTCCCCATCCGCAGGGACAAGCAGGCTGGATGCAAAGCCCTGCTCCTCCGAATAG
GCTCGTAGCGCGGCGCGGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Tetracyclin Repressor Domain-Containing Protein; Transcriptional Regulator TetR Family Protein; Regulator; Regulatory Protein; Regulatory Protein TetR; TetR Family Receptor Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulatory Protein; Regulatory Protein Tetr; TetR Family Regulator; Transcriptional Repressor TetR; TetR Family Transcriptional Repressor

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MAAKPSGAQGDRPRRLRASPQSAPPQSAPPQSASPESAPPESGSSESLEGPRTEPSLSLDRIVAAAVELLDTRGVDGLKM
RQLADRLGAGAMSLYWHVENKEMVFDLALDSVLAYRGPPQKAESRDWRGEVFHMLEDWRASMLRHPWSASLLPRRALGPN
ILSRLELLSNTLSRAGVADADLNAAIWSLWNYVIGATVTRASFVLSDEDRSVAQQRLTGLGEHYPTIERSRLLLDDDWDG
AFRKGLDFLLDGLAPRS

Sequences:

>Translated_257_residues
MAAKPSGAQGDRPRRLRASPQSAPPQSAPPQSASPESAPPESGSSESLEGPRTEPSLSLDRIVAAAVELLDTRGVDGLKM
RQLADRLGAGAMSLYWHVENKEMVFDLALDSVLAYRGPPQKAESRDWRGEVFHMLEDWRASMLRHPWSASLLPRRALGPN
ILSRLELLSNTLSRAGVADADLNAAIWSLWNYVIGATVTRASFVLSDEDRSVAQQRLTGLGEHYPTIERSRLLLDDDWDG
AFRKGLDFLLDGLAPRS
>Mature_256_residues
AAKPSGAQGDRPRRLRASPQSAPPQSAPPQSASPESAPPESGSSESLEGPRTEPSLSLDRIVAAAVELLDTRGVDGLKMR
QLADRLGAGAMSLYWHVENKEMVFDLALDSVLAYRGPPQKAESRDWRGEVFHMLEDWRASMLRHPWSASLLPRRALGPNI
LSRLELLSNTLSRAGVADADLNAAIWSLWNYVIGATVTRASFVLSDEDRSVAQQRLTGLGEHYPTIERSRLLLDDDWDGA
FRKGLDFLLDGLAPRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28177; Mature: 28046

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKPSGAQGDRPRRLRASPQSAPPQSAPPQSASPESAPPESGSSESLEGPRTEPSLSLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RIVAAAVELLDTRGVDGLKMRQLADRLGAGAMSLYWHVENKEMVFDLALDSVLAYRGPPQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCC
KAESRDWRGEVFHMLEDWRASMLRHPWSASLLPRRALGPNILSRLELLSNTLSRAGVADA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCC
DLNAAIWSLWNYVIGATVTRASFVLSDEDRSVAQQRLTGLGEHYPTIERSRLLLDDDWDG
HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCHHHCEEEECCCCCH
AFRKGLDFLLDGLAPRS
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAKPSGAQGDRPRRLRASPQSAPPQSAPPQSASPESAPPESGSSESLEGPRTEPSLSLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
RIVAAAVELLDTRGVDGLKMRQLADRLGAGAMSLYWHVENKEMVFDLALDSVLAYRGPPQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCC
KAESRDWRGEVFHMLEDWRASMLRHPWSASLLPRRALGPNILSRLELLSNTLSRAGVADA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCC
DLNAAIWSLWNYVIGATVTRASFVLSDEDRSVAQQRLTGLGEHYPTIERSRLLLDDDWDG
HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCHHHCEEEECCCCCH
AFRKGLDFLLDGLAPRS
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA