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The map label for this gene is 150397718

Identifier: 150397718

GI number: 150397718

Start: 2618009

End: 2619433

Strand: Direct

Name: 150397718

Synonym: Smed_2520

Alternate gene names: NA

Gene position: 2618009-2619433 (Clockwise)

Preceding gene: 150397717

Following gene: 150397719

Centisome position: 69.22

GC content: 62.81

Gene sequence:

>1425_bases
ATGGCGGTATGTCAATCGGCCGGACGAATGCTGCCGCCGGCGCTGAGATATCGCCTTTCTCTTGTTGCGCGGGGGCTCAC
GCCGCTTCTTGCGGGTGCCGATCAGAGGCGCAGCGCCCAGCGCGTTGCGCTCATCGCCTTTCTGATCCGTGTCGTCAGCG
CGGCAATCGCTTTCCTTTCACAAATCGTTCTGGCGCGGTTCGTCGGCGAATTCGAATACGGCATCTTCATTTTCGTCTGG
GTACTGGTCGTCCTCTTCGGGAACCTGTCCTGCCTCGGCTTCCATGCGACCGTGATCCGCTTCCTGCCGGAATATCATAC
GACCGCAGCACTTGCGAACATCCGCGGCCTGACGACCACGGCACGCGTCTTCGCGATGATTTCGGCAACCATGCTCGCCG
CTGCCGGGATGACCGGCCTCTGGGCCTTCGGGTCAGCTATCGAAAGCTACTATGTGATCCCGCTCTATATCGGCCTGTTC
ACCCTGCCGATGATCGCGCTCGGCGACGTCCTGGACGGCACCGCACGGGCGCATAGCTGGCCGGTCGCGGCGATGAGCCC
GACCTATCTCGTACGTCCGATGCTGATTCTCGGTTTCATGATCATCGCGGTCCGGGCCGGGCTCCCCCGTGATGCGACGA
CGGCCATGGGCGCTGCACTGGCGGCGACCTATGTCACCACGTTCGGACAGTTTCTTGCGATGGCATGGCGACTCCATCGG
CACTACACGCGCGGACCGATGAAGATCGAGCTAGGGCGGTGGCTGCGCGTTTCCGTTCCGATCTTTCTGGTCGACGGTTT
CGGTTTCCTGCTGACCAATTCCGACGTCGTCATCGTGGGTCTTTACCTGAAGCCGGACGATGTGGCGGTCTATTTCGCGG
CGGCCAAGACAATGGCACTCGTTCATTTCGTCATGTTCGCTGTCAAGGCAGCGGCAGGTCCGCGGTTTGCCGCGGCCATG
GCTGCCGGCGACCGCCGGCAGTTGGCGGAAATCGCCGTGGAAAGCGCGCGCTGGTGCTTCTGGCCTTCGCTTGTCATCGG
CGGCTGCGTGCTGGCAGCAGGCAACATGCTGCTTTCGCTGTTCGGCCCGGCCTTTACATCGGGTGCGCCCTTGATGGCCA
TTCTGCTGACGGGAATTCTTGCCAAGGCCTTCGTCGGACCCGCCGAAACACTGCTCACGATGGCAGGGCGGCAAAAGCTT
TGCGCCGTCCTTTATGCCGCCGCGCTCGGGGCAAACATCGCCTTGAACCTGACGCTCATTCCGGCCTTCGGCCTGACGGG
CGCAGCCGCCGCGACTGCAGGCGCGATGTTCGTGGAGGCAGCCATCCTGCATTTCGCCGTCAGGCGCATCTTCGGCTTCT
CCCTGCTGGCCGTTGCCGCCGCGGCGGGCATGAACAACAACGAGAACGAGGCGATTGAGCCATGA

Upstream 100 bases:

>100_bases
GCTTCCTCACCCGCTAAACGAGGGTGCTGAACCCTTTGTTAACGCTGATCTGGCAGAAGTGAAGCCCTGTATTGCGTAAT
GTCAGGGTGTGCTCGTGTTC

Downstream 100 bases:

>100_bases
TCGGCAATGTCCATCTTCCCGCAGACGCGAATGGCAGCGCGGACCGCCTGCTTGGCGGCCTTGCGCATTCTGGTCTCGAC
GGGTTGCAGTCCGAGCGGAC

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Associated Protein; Polysaccharide Export Related Protein; MatE Family; Exopolysaccharide Biosynthesis Protein; Virulence Factor MVIN Family Protein; PST Family Polysaccharide Export Protein; Polysaccharide Biosynthesis Related Protein

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MAVCQSAGRMLPPALRYRLSLVARGLTPLLAGADQRRSAQRVALIAFLIRVVSAAIAFLSQIVLARFVGEFEYGIFIFVW
VLVVLFGNLSCLGFHATVIRFLPEYHTTAALANIRGLTTTARVFAMISATMLAAAGMTGLWAFGSAIESYYVIPLYIGLF
TLPMIALGDVLDGTARAHSWPVAAMSPTYLVRPMLILGFMIIAVRAGLPRDATTAMGAALAATYVTTFGQFLAMAWRLHR
HYTRGPMKIELGRWLRVSVPIFLVDGFGFLLTNSDVVIVGLYLKPDDVAVYFAAAKTMALVHFVMFAVKAAAGPRFAAAM
AAGDRRQLAEIAVESARWCFWPSLVIGGCVLAAGNMLLSLFGPAFTSGAPLMAILLTGILAKAFVGPAETLLTMAGRQKL
CAVLYAAALGANIALNLTLIPAFGLTGAAAATAGAMFVEAAILHFAVRRIFGFSLLAVAAAAGMNNNENEAIEP

Sequences:

>Translated_474_residues
MAVCQSAGRMLPPALRYRLSLVARGLTPLLAGADQRRSAQRVALIAFLIRVVSAAIAFLSQIVLARFVGEFEYGIFIFVW
VLVVLFGNLSCLGFHATVIRFLPEYHTTAALANIRGLTTTARVFAMISATMLAAAGMTGLWAFGSAIESYYVIPLYIGLF
TLPMIALGDVLDGTARAHSWPVAAMSPTYLVRPMLILGFMIIAVRAGLPRDATTAMGAALAATYVTTFGQFLAMAWRLHR
HYTRGPMKIELGRWLRVSVPIFLVDGFGFLLTNSDVVIVGLYLKPDDVAVYFAAAKTMALVHFVMFAVKAAAGPRFAAAM
AAGDRRQLAEIAVESARWCFWPSLVIGGCVLAAGNMLLSLFGPAFTSGAPLMAILLTGILAKAFVGPAETLLTMAGRQKL
CAVLYAAALGANIALNLTLIPAFGLTGAAAATAGAMFVEAAILHFAVRRIFGFSLLAVAAAAGMNNNENEAIEP
>Mature_473_residues
AVCQSAGRMLPPALRYRLSLVARGLTPLLAGADQRRSAQRVALIAFLIRVVSAAIAFLSQIVLARFVGEFEYGIFIFVWV
LVVLFGNLSCLGFHATVIRFLPEYHTTAALANIRGLTTTARVFAMISATMLAAAGMTGLWAFGSAIESYYVIPLYIGLFT
LPMIALGDVLDGTARAHSWPVAAMSPTYLVRPMLILGFMIIAVRAGLPRDATTAMGAALAATYVTTFGQFLAMAWRLHRH
YTRGPMKIELGRWLRVSVPIFLVDGFGFLLTNSDVVIVGLYLKPDDVAVYFAAAKTMALVHFVMFAVKAAAGPRFAAAMA
AGDRRQLAEIAVESARWCFWPSLVIGGCVLAAGNMLLSLFGPAFTSGAPLMAILLTGILAKAFVGPAETLLTMAGRQKLC
AVLYAAALGANIALNLTLIPAFGLTGAAAATAGAMFVEAAILHFAVRRIFGFSLLAVAAAAGMNNNENEAIEP

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50379; Mature: 50247

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AVCQSAGRMLPPALRYRLSLVARGLTPLLAGADQRRSAQRVALIAFLIRVVSAAIAFLS
CCCCCCCCCCCHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIVLARFVGEFEYGIFIFVWVLVVLFGNLSCLGFHATVIRFLPEYHTTAALANIRGLTTT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ARVFAMISATMLAAAGMTGLWAFGSAIESYYVIPLYIGLFTLPMIALGDVLDGTARAHSW
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PVAAMSPTYLVRPMLILGFMIIAVRAGLPRDATTAMGAALAATYVTTFGQFLAMAWRLHR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HYTRGPMKIELGRWLRVSVPIFLVDGFGFLLTNSDVVIVGLYLKPDDVAVYFAAAKTMAL
HHCCCCEEEECCCEEEEECCEEEECCCEEEEECCCEEEEEEEECCCCCEEHHHHHHHHHH
VHFVMFAVKAAAGPRFAAAMAAGDRRQLAEIAVESARWCFWPSLVIGGCVLAAGNMLLSL
HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHH
FGPAFTSGAPLMAILLTGILAKAFVGPAETLLTMAGRQKLCAVLYAAALGANIALNLTLI
HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
PAFGLTGAAAATAGAMFVEAAILHFAVRRIFGFSLLAVAAAAGMNNNENEAIEP
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA