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The map label for this gene is 150397686

Identifier: 150397686

GI number: 150397686

Start: 2570565

End: 2571548

Strand: Direct

Name: 150397686

Synonym: Smed_2486

Alternate gene names: NA

Gene position: 2570565-2571548 (Clockwise)

Preceding gene: 150397677

Following gene: 150397687

Centisome position: 67.97

GC content: 62.91

Gene sequence:

>984_bases
ATGCATATCCTGATCATCGGCGCCGCCGGCATGGTCGGCCGCAAGCTCACGCAACGCCTCGTCAAGGACGGCGCGCTCGG
CGGAAAGCCGGTCGAGAAGCTGACACTTGTGGACGTGGTGACGCCGGAGACGCCGCAGGGCTATGCCGGGACCGTTGTTG
CGCGCGAAGGCGACCTTTCCGCTGCCGGCGAGGCCGAGAAACTGATCGAGAGCCGCCCGGATGTGATCTTCCACCTGGCG
GCAATCGTCTCAGGTGAGGCCGAACTGGATTTTGAAAAGGGCTATCGCATCAATCTCGACGGCACGCGCTATCTCTTCGA
TGCAATCCGCATCGCTCACGACAAGGACGGCTACAAGCCCCGAATTGTCTTCACCTCTTCGATCGCCGTCGTCGGGGCGC
CTCTCCCCTTCCCCATTCCCGACGACTATCACCTGACTCCGCTCACGAGCTACGGCACCCAGAAAGCCATCTGCGAGCTG
CTGCTCTCCGATTACAGCCGCCGCGGCTACTTCGACGGGATCGGCATTCGACTGCCGACGATCTGCATCCGTCCCGGCAA
GCCCAACAAGGCCGCCTCCGGCTTTTTCTCCAATATCCTGCGCGAGCCGCTGGTCGGTCAGGAGGCCGTGCTGCCCGTTT
CGGAGGATGTCCGGCACTGGCATACTTCGCCGCGCTCGGCGGTCGGCTTCCTCATCCATGGCGCAACCATCGATCTTGAA
AAGGTCGGCCCCCGGCGAAACCTTTCCATGCCGGGTCTCAGTGCCACCGTGGGCGAGCAGATCGAGGCGTTGCGCCGCGT
TGCCGGCGAAAAAGCTGTGAAACTCATCCGCCGTGAGCCCGACGAGATGATCATGAAGATGGTCGCCGGCTGGGCGCCGG
GCTTCGAGGCGAAGCGCGCCATCGAACTCGGCTTCACCGCCGAAAAGAGCTTCGACGAGATCATTCGCGTACACGTCGAG
GATGAACTGGGAGGAACGCTGTGA

Upstream 100 bases:

>100_bases
AGCAGAGCATATAAGGTTATCAGACAACCCTACAATAGATATTTTCCACTCCGCATGAAAGGCTCACGCGCATGCGGCCT
CACTTAAGGAGGAGACATCC

Downstream 100 bases:

>100_bases
GCGGAAAGCCGATGATTGCGTTTCTCGGCACCGGCTTGATGGGCGCGCCGATGGCTCGGCGCCTGAGCCGTGCCGGTTTT
CCGGTTACGGTATGGAACCG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MHILIIGAAGMVGRKLTQRLVKDGALGGKPVEKLTLVDVVTPETPQGYAGTVVAREGDLSAAGEAEKLIESRPDVIFHLA
AIVSGEAELDFEKGYRINLDGTRYLFDAIRIAHDKDGYKPRIVFTSSIAVVGAPLPFPIPDDYHLTPLTSYGTQKAICEL
LLSDYSRRGYFDGIGIRLPTICIRPGKPNKAASGFFSNILREPLVGQEAVLPVSEDVRHWHTSPRSAVGFLIHGATIDLE
KVGPRRNLSMPGLSATVGEQIEALRRVAGEKAVKLIRREPDEMIMKMVAGWAPGFEAKRAIELGFTAEKSFDEIIRVHVE
DELGGTL

Sequences:

>Translated_327_residues
MHILIIGAAGMVGRKLTQRLVKDGALGGKPVEKLTLVDVVTPETPQGYAGTVVAREGDLSAAGEAEKLIESRPDVIFHLA
AIVSGEAELDFEKGYRINLDGTRYLFDAIRIAHDKDGYKPRIVFTSSIAVVGAPLPFPIPDDYHLTPLTSYGTQKAICEL
LLSDYSRRGYFDGIGIRLPTICIRPGKPNKAASGFFSNILREPLVGQEAVLPVSEDVRHWHTSPRSAVGFLIHGATIDLE
KVGPRRNLSMPGLSATVGEQIEALRRVAGEKAVKLIRREPDEMIMKMVAGWAPGFEAKRAIELGFTAEKSFDEIIRVHVE
DELGGTL
>Mature_327_residues
MHILIIGAAGMVGRKLTQRLVKDGALGGKPVEKLTLVDVVTPETPQGYAGTVVAREGDLSAAGEAEKLIESRPDVIFHLA
AIVSGEAELDFEKGYRINLDGTRYLFDAIRIAHDKDGYKPRIVFTSSIAVVGAPLPFPIPDDYHLTPLTSYGTQKAICEL
LLSDYSRRGYFDGIGIRLPTICIRPGKPNKAASGFFSNILREPLVGQEAVLPVSEDVRHWHTSPRSAVGFLIHGATIDLE
KVGPRRNLSMPGLSATVGEQIEALRRVAGEKAVKLIRREPDEMIMKMVAGWAPGFEAKRAIELGFTAEKSFDEIIRVHVE
DELGGTL

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 35618; Mature: 35618

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILIIGAAGMVGRKLTQRLVKDGALGGKPVEKLTLVDVVTPETPQGYAGTVVAREGDLS
CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCC
AAGEAEKLIESRPDVIFHLAAIVSGEAELDFEKGYRINLDGTRYLFDAIRIAHDKDGYKP
CCCHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCEEEECCCHHHHHHHHHHHCCCCCCCC
RIVFTSSIAVVGAPLPFPIPDDYHLTPLTSYGTQKAICELLLSDYSRRGYFDGIGIRLPT
EEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECE
ICIRPGKPNKAASGFFSNILREPLVGQEAVLPVSEDVRHWHTSPRSAVGFLIHGATIDLE
EEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCHHEEEEEECCEEEHH
KVGPRRNLSMPGLSATVGEQIEALRRVAGEKAVKLIRREPDEMIMKMVAGWAPGFEAKRA
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCE
IELGFTAEKSFDEIIRVHVEDELGGTL
EEECCCCHHCHHHHEEEEECHHCCCCC
>Mature Secondary Structure
MHILIIGAAGMVGRKLTQRLVKDGALGGKPVEKLTLVDVVTPETPQGYAGTVVAREGDLS
CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCC
AAGEAEKLIESRPDVIFHLAAIVSGEAELDFEKGYRINLDGTRYLFDAIRIAHDKDGYKP
CCCHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCEEEECCCHHHHHHHHHHHCCCCCCCC
RIVFTSSIAVVGAPLPFPIPDDYHLTPLTSYGTQKAICELLLSDYSRRGYFDGIGIRLPT
EEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECE
ICIRPGKPNKAASGFFSNILREPLVGQEAVLPVSEDVRHWHTSPRSAVGFLIHGATIDLE
EEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCHHEEEEEECCEEEHH
KVGPRRNLSMPGLSATVGEQIEALRRVAGEKAVKLIRREPDEMIMKMVAGWAPGFEAKRA
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCE
IELGFTAEKSFDEIIRVHVEDELGGTL
EEECCCCHHCHHHHEEEEECHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]