Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150397683

Identifier: 150397683

GI number: 150397683

Start: 2566791

End: 2567969

Strand: Reverse

Name: 150397683

Synonym: Smed_2483

Alternate gene names: NA

Gene position: 2567969-2566791 (Counterclockwise)

Preceding gene: 150397684

Following gene: 150397682

Centisome position: 67.9

GC content: 61.83

Gene sequence:

>1179_bases
ATGAGCGGAGGATTTCTGGTGAGTTTCGAACGGGCGCTGAGCGCCGAATATATTCAGCCCGCCGACGCATCCAGCGCGAT
GCTCGTCGGGCGCGTCTGGTCCAAAACCGCCGGCGGACCCTGTCCGGTCCTGATCAAGGGCGGAGAGGTGTTCGACCTGA
CCCCGATAGCGGCAACGATCTCGGCGCTTCTCGAGATCGACGGGCTGGCGGACGCTTTGCGCGATTCCACGCGCTTTGCG
AGTCTCGGCTCTCTCGACGCGTTCCTCACGGGCGAGGCGGGCGATCTTCTCGCGCCAGCCGATCTGCAGGCCGTCAAGGC
GGCTGGCGTCACCTTTGCGGACAGCATGCTGGAGCGCGTGATCGAGGAACAGGCCAAGGGCGATCCGCTGCGTGCGCAGG
AGATCCGCGGCCGGCTGGCGCCCGTCCTCGGCGACAATCTCAAGGGCCTCGTCGCCGGTTCGCAGAAGGCCGCCGAGGTC
AAGAAACTGCTCCAGGAACTCGGTCTTTGGTCGCAATACCTCGAAGTGGGTATCGGTCCCGACGCCGAAATCTTCACCAA
GGCGCAGCCTATGTCTTCGGTCGGCTGTGGTGCGGATATCGGCATCCACCCCAAATCCGACTGGAACAATCCCGAGCCGG
AGGTGGTCCTGGCCGTCACGTCGAAGGGCAAGATCGTCGGCGCCACACTCGGCAATGACGTCAATCTTCGCGATTTCGAA
GGACGTTCCGCACTGCTCCTCAGCAAGGCCAAGGACAATAATGCGTCCTGCTCGATCGGCCCTTTCATCCGGCTCTTCTA
CGGCGATTTCACGATTGAGGACGTAAAGCAGGCGGAGGTCTCCCTCGTCGTCGACGGCAGGGAAGGGTTCAGGATGACCG
GCGTCAGTCCGATGTCTGCGATCAGCCGCAGCCCTGAAGATCTGGTTTCGCAGCTTCTGAATGACAACCATCAGTATCCT
GACGGGGTCGTTTTCTTCCTCGGGACCATGTTTGCGCCGGTGAAGGATCGTCGAGGCGCGGGACTTGGTTTCACGCATGA
AATCGGAGACAGGGTCGAGATTTCGACCCCGCATCTCGGGCGACTCGTAAACTGGGTCGATCACAGCGACCGCTGCCCGA
AATGGAGTTTCGGCATCGGCGCTCTGATGAAGAATCTTGCCGCGCGCGGGCTCTTGTAG

Upstream 100 bases:

>100_bases
TTACCCACGGCCTAGACATGGCCCAAAAGTCATACTAGAAGCAGGTCATCTCATTGTCAGACATCCTGACAATGAGAGGC
GCGTACCTTCGAGGTACGAG

Downstream 100 bases:

>100_bases
GCGGAACGGGAGGGGCAGATGCAAAAAGCGATCGATATTTTCTACAGACTTCTCGGGCTGCTGCTGATCATGCTGCTCGC
AGGCATGGCCTTGATGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; 2-Keto-3-Deoxyxylonate Dehydratase

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSGGFLVSFERALSAEYIQPADASSAMLVGRVWSKTAGGPCPVLIKGGEVFDLTPIAATISALLEIDGLADALRDSTRFA
SLGSLDAFLTGEAGDLLAPADLQAVKAAGVTFADSMLERVIEEQAKGDPLRAQEIRGRLAPVLGDNLKGLVAGSQKAAEV
KKLLQELGLWSQYLEVGIGPDAEIFTKAQPMSSVGCGADIGIHPKSDWNNPEPEVVLAVTSKGKIVGATLGNDVNLRDFE
GRSALLLSKAKDNNASCSIGPFIRLFYGDFTIEDVKQAEVSLVVDGREGFRMTGVSPMSAISRSPEDLVSQLLNDNHQYP
DGVVFFLGTMFAPVKDRRGAGLGFTHEIGDRVEISTPHLGRLVNWVDHSDRCPKWSFGIGALMKNLAARGLL

Sequences:

>Translated_392_residues
MSGGFLVSFERALSAEYIQPADASSAMLVGRVWSKTAGGPCPVLIKGGEVFDLTPIAATISALLEIDGLADALRDSTRFA
SLGSLDAFLTGEAGDLLAPADLQAVKAAGVTFADSMLERVIEEQAKGDPLRAQEIRGRLAPVLGDNLKGLVAGSQKAAEV
KKLLQELGLWSQYLEVGIGPDAEIFTKAQPMSSVGCGADIGIHPKSDWNNPEPEVVLAVTSKGKIVGATLGNDVNLRDFE
GRSALLLSKAKDNNASCSIGPFIRLFYGDFTIEDVKQAEVSLVVDGREGFRMTGVSPMSAISRSPEDLVSQLLNDNHQYP
DGVVFFLGTMFAPVKDRRGAGLGFTHEIGDRVEISTPHLGRLVNWVDHSDRCPKWSFGIGALMKNLAARGLL
>Mature_391_residues
SGGFLVSFERALSAEYIQPADASSAMLVGRVWSKTAGGPCPVLIKGGEVFDLTPIAATISALLEIDGLADALRDSTRFAS
LGSLDAFLTGEAGDLLAPADLQAVKAAGVTFADSMLERVIEEQAKGDPLRAQEIRGRLAPVLGDNLKGLVAGSQKAAEVK
KLLQELGLWSQYLEVGIGPDAEIFTKAQPMSSVGCGADIGIHPKSDWNNPEPEVVLAVTSKGKIVGATLGNDVNLRDFEG
RSALLLSKAKDNNASCSIGPFIRLFYGDFTIEDVKQAEVSLVVDGREGFRMTGVSPMSAISRSPEDLVSQLLNDNHQYPD
GVVFFLGTMFAPVKDRRGAGLGFTHEIGDRVEISTPHLGRLVNWVDHSDRCPKWSFGIGALMKNLAARGLL

Specific function: Unknown

COG id: COG3970

COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41695; Mature: 41564

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGFLVSFERALSAEYIQPADASSAMLVGRVWSKTAGGPCPVLIKGGEVFDLTPIAATI
CCCCEEEEHHHHHHHHHCCCCCCCCCEEEHHHHHCCCCCCCCEEEECCCEEECCHHHHHH
SALLEIDGLADALRDSTRFASLGSLDAFLTGEAGDLLAPADLQAVKAAGVTFADSMLERV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
IEEQAKGDPLRAQEIRGRLAPVLGDNLKGLVAGSQKAAEVKKLLQELGLWSQYLEVGIGP
HHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCC
DAEIFTKAQPMSSVGCGADIGIHPKSDWNNPEPEVVLAVTSKGKIVGATLGNDVNLRDFE
CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEECC
GRSALLLSKAKDNNASCSIGPFIRLFYGDFTIEDVKQAEVSLVVDGREGFRMTGVSPMSA
CCCEEEEEECCCCCCCCCHHHHHEEHCCCCCHHHHCCCEEEEEEECCCCCEECCCCHHHH
ISRSPEDLVSQLLNDNHQYPDGVVFFLGTMFAPVKDRRGAGLGFTHEIGDRVEISTPHLG
HCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEECCCHHH
RLVNWVDHSDRCPKWSFGIGALMKNLAARGLL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGGFLVSFERALSAEYIQPADASSAMLVGRVWSKTAGGPCPVLIKGGEVFDLTPIAATI
CCCEEEEHHHHHHHHHCCCCCCCCCEEEHHHHHCCCCCCCCEEEECCCEEECCHHHHHH
SALLEIDGLADALRDSTRFASLGSLDAFLTGEAGDLLAPADLQAVKAAGVTFADSMLERV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
IEEQAKGDPLRAQEIRGRLAPVLGDNLKGLVAGSQKAAEVKKLLQELGLWSQYLEVGIGP
HHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCC
DAEIFTKAQPMSSVGCGADIGIHPKSDWNNPEPEVVLAVTSKGKIVGATLGNDVNLRDFE
CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEECC
GRSALLLSKAKDNNASCSIGPFIRLFYGDFTIEDVKQAEVSLVVDGREGFRMTGVSPMSA
CCCEEEEEECCCCCCCCCHHHHHEEHCCCCCHHHHCCCEEEEEEECCCCCEECCCCHHHH
ISRSPEDLVSQLLNDNHQYPDGVVFFLGTMFAPVKDRRGAGLGFTHEIGDRVEISTPHLG
HCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEECCCHHH
RLVNWVDHSDRCPKWSFGIGALMKNLAARGLL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA