| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is mhqO [H]
Identifier: 150397602
GI number: 150397602
Start: 2477535
End: 2479091
Strand: Direct
Name: mhqO [H]
Synonym: Smed_2402
Alternate gene names: 150397602
Gene position: 2477535-2479091 (Clockwise)
Preceding gene: 150397601
Following gene: 150397611
Centisome position: 65.51
GC content: 64.55
Gene sequence:
>1557_bases GTGACGAGCGGCATCCACCACATCACCCTGATCGCCCGCAAGGTGCAGGCCAATGTCGATTTCTATGTGGGGTTCCTCGG ACTTCACCTCGTAAAGCGGACCGGCGGCTACGAAGATCCAAACCAACTGCATCTCTTCTATGGCGACGCCTCGGGGTCGC CGGGGTCGCTGGTCAGTTTCTTGATCTGGGAAGATGGCTCTCCAGGCCGGGTCGGCCACGGTCAGCCGAGCGAGATCGCC TTCGCCATTCCGCCCGAAAGCATAGGCTACTGGATGACGCGAGCGCTGCAGTTCCATATCCAGGCGACAGGTCCAGCGCA GGAATTCGGCGAACCGGTCCTCCGCCTGAAGGACCCGGACGGCGTAATCGTCAAGCTGGTGGGGACGAACGCCCTTGCCG AGCCCGCGCCTTGGGCCGGCCGCGATATTCCCGAAACGGACGCCATTCGCCGCCTGCGCGGCGCAACGGTACTCACCGAG AAATCCGAAGACACGGCACGTTTCCTCCAAAACCACTTCGGCTACGCCGAGACGGGCGCGACAGAGAGCATCCGGCGGCT GACCTCCAGGTCGGGGGATGTCATCGACGTGCGCGATGCCGGCGGGTTCTGGAGTGCCGCGCCCGGAACCGGAACGATCG ACCACATCGCCTTCCGTGCGCCGGATGAGGCGACGGTGCTGGCAGTGAGGGCGGACCTCGAACAGGAGCAGGCCGGCGCC ACGAATGCGCATGACCGGAAGTACTTCTTTTCGCTTTATGTGCGCGAGCCGGGTGGATCGCTCTGCGAGCTCGCCACGGA TGGTCCCGGCTTCACCGTCGACGAGGCTCCCGATGCCCTCGGCACGACGCTCTTCCTGCCGCCGCATCTGGCGGGCGACC TCACCGCAACACTGGTCCGGCTGCCGCAATTCGCAATGCCCGGCGAGCCTAGGGTGCCGCAGCGCGACTTGCCGTTCATC CATCGCTTTTACCGACCGGAGAAGGCGAACGATCGCACATTCGTGCTGCTGCACGGCAGCGGCGGCAACGAGATCGATAT GCTGCCCTTCGGCCATCAACTCGACCCCCGCGCGACTCTCCTCGGCGTGCGCGGCCGCAGCACCGAGGAAGGCTTCCCGC GCTGGTTCCGGCGCTTCTCGATGACGAAATTCGATCAACAGGACATTCGCGCTGAGGCGGAAGCCTTCGTCGCCTTCGTC GCGGGCACGCGGGAGGGCTATGGGCTCGATCTGGAAAAGACCGTGTTCATCGGCTACTCGAACGGTGCCAACCTGCTCGC CGCCGTCTTGCTGCTCCATCCCGGTTCCATCAGAAACGTCGTGCTGATGCGCGCAATGGCGGCGCTCGACGATACGCCGG AACCGGACCTTACCGGCACCAAAGTGCTGATGCTCACCGGAAAGGACGACCCGTACGGCAAGCACGCGCCGGAGCTGAAG TCGGCACTCGGCGACAGCGGCGCGAATTTCGAGGCGATCGACCTCGATATCGGCCACGGAATAGGGGTCGAGGATATAGC CGTGATCCGGCCGTGGCTCACCGAATCCGGTCTCTGA
Upstream 100 bases:
>100_bases CATTCGGACTATGGCGACGCTTTCCAGGCGTTTCTTGCCGAAACGAAGAACTGAGTACATTGCAAACGGTGCCGTCAGTA ACGGCAGGAAGGGCTAAACC
Downstream 100 bases:
>100_bases CTATGCCTTCGTCGCGACGTGGTCGGCAAAGGCTTTGATGAAACCGCCTAGCCGCTCGCGTGTCTGCTCGTCTTTCAGCC GTCCCGCGTCATCGAAAAGC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MTSGIHHITLIARKVQANVDFYVGFLGLHLVKRTGGYEDPNQLHLFYGDASGSPGSLVSFLIWEDGSPGRVGHGQPSEIA FAIPPESIGYWMTRALQFHIQATGPAQEFGEPVLRLKDPDGVIVKLVGTNALAEPAPWAGRDIPETDAIRRLRGATVLTE KSEDTARFLQNHFGYAETGATESIRRLTSRSGDVIDVRDAGGFWSAAPGTGTIDHIAFRAPDEATVLAVRADLEQEQAGA TNAHDRKYFFSLYVREPGGSLCELATDGPGFTVDEAPDALGTTLFLPPHLAGDLTATLVRLPQFAMPGEPRVPQRDLPFI HRFYRPEKANDRTFVLLHGSGGNEIDMLPFGHQLDPRATLLGVRGRSTEEGFPRWFRRFSMTKFDQQDIRAEAEAFVAFV AGTREGYGLDLEKTVFIGYSNGANLLAAVLLLHPGSIRNVVLMRAMAALDDTPEPDLTGTKVLMLTGKDDPYGKHAPELK SALGDSGANFEAIDLDIGHGIGVEDIAVIRPWLTESGL
Sequences:
>Translated_518_residues MTSGIHHITLIARKVQANVDFYVGFLGLHLVKRTGGYEDPNQLHLFYGDASGSPGSLVSFLIWEDGSPGRVGHGQPSEIA FAIPPESIGYWMTRALQFHIQATGPAQEFGEPVLRLKDPDGVIVKLVGTNALAEPAPWAGRDIPETDAIRRLRGATVLTE KSEDTARFLQNHFGYAETGATESIRRLTSRSGDVIDVRDAGGFWSAAPGTGTIDHIAFRAPDEATVLAVRADLEQEQAGA TNAHDRKYFFSLYVREPGGSLCELATDGPGFTVDEAPDALGTTLFLPPHLAGDLTATLVRLPQFAMPGEPRVPQRDLPFI HRFYRPEKANDRTFVLLHGSGGNEIDMLPFGHQLDPRATLLGVRGRSTEEGFPRWFRRFSMTKFDQQDIRAEAEAFVAFV AGTREGYGLDLEKTVFIGYSNGANLLAAVLLLHPGSIRNVVLMRAMAALDDTPEPDLTGTKVLMLTGKDDPYGKHAPELK SALGDSGANFEAIDLDIGHGIGVEDIAVIRPWLTESGL >Mature_517_residues TSGIHHITLIARKVQANVDFYVGFLGLHLVKRTGGYEDPNQLHLFYGDASGSPGSLVSFLIWEDGSPGRVGHGQPSEIAF AIPPESIGYWMTRALQFHIQATGPAQEFGEPVLRLKDPDGVIVKLVGTNALAEPAPWAGRDIPETDAIRRLRGATVLTEK SEDTARFLQNHFGYAETGATESIRRLTSRSGDVIDVRDAGGFWSAAPGTGTIDHIAFRAPDEATVLAVRADLEQEQAGAT NAHDRKYFFSLYVREPGGSLCELATDGPGFTVDEAPDALGTTLFLPPHLAGDLTATLVRLPQFAMPGEPRVPQRDLPFIH RFYRPEKANDRTFVLLHGSGGNEIDMLPFGHQLDPRATLLGVRGRSTEEGFPRWFRRFSMTKFDQQDIRAEAEAFVAFVA GTREGYGLDLEKTVFIGYSNGANLLAAVLLLHPGSIRNVVLMRAMAALDDTPEPDLTGTKVLMLTGKDDPYGKHAPELKS ALGDSGANFEAIDLDIGHGIGVEDIAVIRPWLTESGL
Specific function: Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: 3.1.-.- [C]
Molecular weight: Translated: 56289; Mature: 56158
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGIHHITLIARKVQANVDFYVGFLGLHLVKRTGGYEDPNQLHLFYGDASGSPGSLVSF CCCCCEEHHEEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEE LIWEDGSPGRVGHGQPSEIAFAIPPESIGYWMTRALQFHIQATGPAQEFGEPVLRLKDPD EEEECCCCCCCCCCCCCCEEEECCCHHHHHHHEEEEEEEEEECCCHHHHCCCEEEEECCC GVIVKLVGTNALAEPAPWAGRDIPETDAIRRLRGATVLTEKSEDTARFLQNHFGYAETGA CEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCH TESIRRLTSRSGDVIDVRDAGGFWSAAPGTGTIDHIAFRAPDEATVLAVRADLEQEQAGA HHHHHHHHCCCCCEEEEECCCCCEECCCCCCCHHHEEEECCCCCEEEEEECCCCHHHCCC TNAHDRKYFFSLYVREPGGSLCELATDGPGFTVDEAPDALGTTLFLPPHLAGDLTATLVR CCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHCCEEEECCCCCCHHHHHHHH LPQFAMPGEPRVPQRDLPFIHRFYRPEKANDRTFVLLHGSGGNEIDMLPFGHQLDPRATL CCHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEE LGVRGRSTEEGFPRWFRRFSMTKFDQQDIRAEAEAFVAFVAGTREGYGLDLEKTVFIGYS EEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEEC NGANLLAAVLLLHPGSIRNVVLMRAMAALDDTPEPDLTGTKVLMLTGKDDPYGKHAPELK CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH SALGDSGANFEAIDLDIGHGIGVEDIAVIRPWLTESGL HHHCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHCCCC >Mature Secondary Structure TSGIHHITLIARKVQANVDFYVGFLGLHLVKRTGGYEDPNQLHLFYGDASGSPGSLVSF CCCCEEHHEEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEE LIWEDGSPGRVGHGQPSEIAFAIPPESIGYWMTRALQFHIQATGPAQEFGEPVLRLKDPD EEEECCCCCCCCCCCCCCEEEECCCHHHHHHHEEEEEEEEEECCCHHHHCCCEEEEECCC GVIVKLVGTNALAEPAPWAGRDIPETDAIRRLRGATVLTEKSEDTARFLQNHFGYAETGA CEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCH TESIRRLTSRSGDVIDVRDAGGFWSAAPGTGTIDHIAFRAPDEATVLAVRADLEQEQAGA HHHHHHHHCCCCCEEEEECCCCCEECCCCCCCHHHEEEECCCCCEEEEEECCCCHHHCCC TNAHDRKYFFSLYVREPGGSLCELATDGPGFTVDEAPDALGTTLFLPPHLAGDLTATLVR CCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHCCEEEECCCCCCHHHHHHHH LPQFAMPGEPRVPQRDLPFIHRFYRPEKANDRTFVLLHGSGGNEIDMLPFGHQLDPRATL CCHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEE LGVRGRSTEEGFPRWFRRFSMTKFDQQDIRAEAEAFVAFVAGTREGYGLDLEKTVFIGYS EEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEEC NGANLLAAVLLLHPGSIRNVVLMRAMAALDDTPEPDLTGTKVLMLTGKDDPYGKHAPELK CCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH SALGDSGANFEAIDLDIGHGIGVEDIAVIRPWLTESGL HHHCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]