Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is yjaB [C]

Identifier: 150397570

GI number: 150397570

Start: 2448323

End: 2448808

Strand: Direct

Name: yjaB [C]

Synonym: Smed_2370

Alternate gene names: 150397570

Gene position: 2448323-2448808 (Clockwise)

Preceding gene: 150397569

Following gene: 150397571

Centisome position: 64.74

GC content: 61.11

Gene sequence:

>486_bases
ATGAGGAATAGCGACGCTGGACAGGTGCACTGTCGCGTTGCCGTCCCGGCCGATATGGCGGCATGCGCGGCCATTCTCAA
TCGCTGGATAGACGCGACGCCATGGATGCCCCGCGTCCATCCTGAGGATGATGTGGAGCGGCATTATCGGGAAAGCGTCT
TTGAGAGCGGTCCGGTCATCGTCGCCGACTGTCGAGGCGAAATCGCGGGATTTCTCGCTCTGTCTGGCGGCGGCCATGTG
ACTGCTCTCTATCTGGACGAACGTTACAGAGGTCTTGGGATCGGCGCCGCTCTGATCCGCGAAGCCAAAAGGCGCGCAGA
AACCGGGCTCGAGCTTTGGACGTTCGAAAACAATCGCGACGCTCAGCGCTTCTATGAACGCGAGGGTTTCGTCCCGGTGC
GCAGGACCGATGGCGACAATGAAGAGGGGCTGCCGGATATTCTCTATCGATGGCGCGCCGACCCCTTGCGCGAAAGGGAG
GCGTGA

Upstream 100 bases:

>100_bases
TCGACGCTTCCGAGGGAACGCCCACTCGGCATCCGCGAAACGCCGGAGTTCCTGGAAATCGCGCATCGGGTTCGCGAAGG
CTTGAGAGCGGGGCACAGCT

Downstream 100 bases:

>100_bases
TCATGCGCGACGAAAGCTTCCTGAAAGACAAGCTGCTTCCGATCGGCACCGTCGTCCTGCTCTTGATTGCCGTCTGGTAC
GTGGCTGCCGTCTATCTGAA

Product: GCN5-like N-acetyltransferase

Products: NA

Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase; Acetyltransferase Gnat Family Protein

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVIVADCRGEIAGFLALSGGGHV
TALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRDAQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLRERE
A

Sequences:

>Translated_161_residues
MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVIVADCRGEIAGFLALSGGGHV
TALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRDAQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLRERE
A
>Mature_161_residues
MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVIVADCRGEIAGFLALSGGGHV
TALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRDAQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLRERE
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.- [C]

Molecular weight: Translated: 18269; Mature: 18269

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVI
CCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
VADCRGEIAGFLALSGGGHVTALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRD
EEECCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCH
AQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLREREA
HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRNSDAGQVHCRVAVPADMAACAAILNRWIDATPWMPRVHPEDDVERHYRESVFESGPVI
CCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
VADCRGEIAGFLALSGGGHVTALYLDERYRGLGIGAALIREAKRRAETGLELWTFENNRD
EEECCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCH
AQRFYEREGFVPVRRTDGDNEEGLPDILYRWRADPLREREA
HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA