| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397519
Identifier: 150397519
GI number: 150397519
Start: 2400098
End: 2400481
Strand: Reverse
Name: 150397519
Synonym: Smed_2319
Alternate gene names: NA
Gene position: 2400481-2400098 (Counterclockwise)
Preceding gene: 150397520
Following gene: 150397516
Centisome position: 63.47
GC content: 57.55
Gene sequence:
>384_bases ATGGCAACCGATACGCAGCGCCATCCATCCATCGGGCCTGCCCATCCGGGTGAGATGCTGGGTGAGATCATGATACCCGC CACTGGCAGGAGCAAGGCGGAGATCGCACGCCGGCTCGGCGTCTCCCGGTCTACCCTCTACGATATTCTGAACCAGAAGC AGCCGGTGACTCCTGCAATTGCAGTGCGTCTGGGTAAGCTTTTTGGAGATGGGCCCGGCATCAGGATGCAGGCGGCTTAC GACACATGGCACGCTGGCGTGAGATCGACGTCAGCGGCATTGAGACCTTGGGTCGACCTACTGCATGTTTCCTTTAATCG GATCCGATTGAAGGACAAAAACATGCAGCAGATCAAAGTGCTACAGCGGCCTTTGTGCGTCTGA
Upstream 100 bases:
>100_bases GATCAGGTTGGGCGCATTGCGGTTCGGGTCTCTCGAAACTGGCGGATCACCTTTTCTTGGGAAGGTGAGAACGCCACGAA TGTTGAAATGAAGGACTACC
Downstream 100 bases:
>100_bases TAAGACGCACGGCGCTGTAGAGCATTTCCGCTTTTCTCCGTATCGCGGAAACTCTGCAGCCCCTTGTTTGGCGCAATTCC GGACGGAAAAGCGCTTCGCA
Product: XRE family plasmid maintenance system antidote protein
Products: NA
Alternate protein names: XRE Family Plasmid Maintenance System Antidote Protein; Plasmid Maintenance System Antidote Protein XRE Family; Proteic Killer Active Protein; XRE Family Transcriptional Regulator
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MATDTQRHPSIGPAHPGEMLGEIMIPATGRSKAEIARRLGVSRSTLYDILNQKQPVTPAIAVRLGKLFGDGPGIRMQAAY DTWHAGVRSTSAALRPWVDLLHVSFNRIRLKDKNMQQIKVLQRPLCV
Sequences:
>Translated_127_residues MATDTQRHPSIGPAHPGEMLGEIMIPATGRSKAEIARRLGVSRSTLYDILNQKQPVTPAIAVRLGKLFGDGPGIRMQAAY DTWHAGVRSTSAALRPWVDLLHVSFNRIRLKDKNMQQIKVLQRPLCV >Mature_126_residues ATDTQRHPSIGPAHPGEMLGEIMIPATGRSKAEIARRLGVSRSTLYDILNQKQPVTPAIAVRLGKLFGDGPGIRMQAAYD TWHAGVRSTSAALRPWVDLLHVSFNRIRLKDKNMQQIKVLQRPLCV
Specific function: Unknown
COG id: COG3093
COG function: function code R; Plasmid maintenance system antidote protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14064; Mature: 13932
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDTQRHPSIGPAHPGEMLGEIMIPATGRSKAEIARRLGVSRSTLYDILNQKQPVTPAI CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH AVRLGKLFGDGPGIRMQAAYDTWHAGVRSTSAALRPWVDLLHVSFNRIRLKDKNMQQIKV HHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH LQRPLCV HHCCCCC >Mature Secondary Structure ATDTQRHPSIGPAHPGEMLGEIMIPATGRSKAEIARRLGVSRSTLYDILNQKQPVTPAI CCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH AVRLGKLFGDGPGIRMQAAYDTWHAGVRSTSAALRPWVDLLHVSFNRIRLKDKNMQQIKV HHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH LQRPLCV HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA