Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150397474

Identifier: 150397474

GI number: 150397474

Start: 2349555

End: 2350178

Strand: Reverse

Name: 150397474

Synonym: Smed_2274

Alternate gene names: NA

Gene position: 2350178-2349555 (Counterclockwise)

Preceding gene: 150397480

Following gene: 150397473

Centisome position: 62.14

GC content: 62.98

Gene sequence:

>624_bases
ATGGCAGAAGGCAAGATTCAGCAAACGGGCGACGCGGCGGGGCTTGCCGCGCTGATCGCGCGCGCTGCCGGGCAGACGGG
CGGTGAGGGGAGAGGATTGCCCCCGGTGGAGCGTTGGAACCCGCCATTCTGCGGCGACATCGATATGGAAATCCGGAGCG
ACGGGACCTGGTTTTACATGGGTACCCCAATCGGCCGCGAGCCGCTGGTGAGGCTGTTCTCGACCGTGCTCCGCAAGGAC
GACGACGGAACGACCTACCTCGTCACGCCTGTGGAAAAGGTCGGTATCCGCGTCGCCGACGCGCCGTTCATTGCAGTGGA
AATGAGTGCGATGAAGAAAGCTGGTGAGAACGTGCTGACCTTCCGCACCAATGTAGGCGATGTGATAGAGGCGGGGCCGG
AGCATCCGTTGCGTTTCGTCACTCATGGCGACAATCGCGAACTCAAACCCTATCTACACGTGCGCGGACGGCTTGAGGCG
CTCGTCTCGCGGCCGGTGATGTACGATCTCGTCGAACTCGGCCACACCGTCGCGGTCGGCGGCGTGGACATGTTCTGCAT
CAAATCGGCTGGAGCGGTCTTCCCGATCATGCCCGCGGCCGAGCTGGAAGCGCTGTCTCGATGA

Upstream 100 bases:

>100_bases
CTGCATATTTTTGTCCTTAATCGGCTGCGATTAAGGAAACATGCAGGAGGTGAAGGCGCCATTCTTCAGATGGAAGATCG
AGATCAAACGGGACAGAACA

Downstream 100 bases:

>100_bases
GCAGTCGCCCATATTCCGCCGACGAGTTCCGTCGCCGTGCGCTGCAGCAGGCGGGAGGACCAATCGAAACCGCCTGGCGC
GATCACGGCGATTTCCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAEGKIQQTGDAAGLAALIARAAGQTGGEGRGLPPVERWNPPFCGDIDMEIRSDGTWFYMGTPIGREPLVRLFSTVLRKD
DDGTTYLVTPVEKVGIRVADAPFIAVEMSAMKKAGENVLTFRTNVGDVIEAGPEHPLRFVTHGDNRELKPYLHVRGRLEA
LVSRPVMYDLVELGHTVAVGGVDMFCIKSAGAVFPIMPAAELEALSR

Sequences:

>Translated_207_residues
MAEGKIQQTGDAAGLAALIARAAGQTGGEGRGLPPVERWNPPFCGDIDMEIRSDGTWFYMGTPIGREPLVRLFSTVLRKD
DDGTTYLVTPVEKVGIRVADAPFIAVEMSAMKKAGENVLTFRTNVGDVIEAGPEHPLRFVTHGDNRELKPYLHVRGRLEA
LVSRPVMYDLVELGHTVAVGGVDMFCIKSAGAVFPIMPAAELEALSR
>Mature_206_residues
AEGKIQQTGDAAGLAALIARAAGQTGGEGRGLPPVERWNPPFCGDIDMEIRSDGTWFYMGTPIGREPLVRLFSTVLRKDD
DGTTYLVTPVEKVGIRVADAPFIAVEMSAMKKAGENVLTFRTNVGDVIEAGPEHPLRFVTHGDNRELKPYLHVRGRLEAL
VSRPVMYDLVELGHTVAVGGVDMFCIKSAGAVFPIMPAAELEALSR

Specific function: Unknown

COG id: COG3816

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22362; Mature: 22231

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEGKIQQTGDAAGLAALIARAAGQTGGEGRGLPPVERWNPPFCGDIDMEIRSDGTWFYM
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCEEEEE
GTPIGREPLVRLFSTVLRKDDDGTTYLVTPVEKVGIRVADAPFIAVEMSAMKKAGENVLT
CCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHCEEECCCCEEEEEHHHHHHCCCCEEE
FRTNVGDVIEAGPEHPLRFVTHGDNRELKPYLHVRGRLEALVSRPVMYDLVELGHTVAVG
EECCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEC
GVDMFCIKSAGAVFPIMPAAELEALSR
CCEEEEECCCCCEEECCCHHHHHHHCC
>Mature Secondary Structure 
AEGKIQQTGDAAGLAALIARAAGQTGGEGRGLPPVERWNPPFCGDIDMEIRSDGTWFYM
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCEEEEE
GTPIGREPLVRLFSTVLRKDDDGTTYLVTPVEKVGIRVADAPFIAVEMSAMKKAGENVLT
CCCCCHHHHHHHHHHHHHCCCCCCEEEEECHHHHCEEECCCCEEEEEHHHHHHCCCCEEE
FRTNVGDVIEAGPEHPLRFVTHGDNRELKPYLHVRGRLEALVSRPVMYDLVELGHTVAVG
EECCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEC
GVDMFCIKSAGAVFPIMPAAELEALSR
CCEEEEECCCCCEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA