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The map label for this gene is ydeM [H]

Identifier: 150397468

GI number: 150397468

Start: 2345792

End: 2346247

Strand: Direct

Name: ydeM [H]

Synonym: Smed_2268

Alternate gene names: 150397468

Gene position: 2345792-2346247 (Clockwise)

Preceding gene: 150397466

Following gene: 150397469

Centisome position: 62.03

GC content: 60.09

Gene sequence:

>456_bases
ATGCTGTATTTCGAGGATTTCATTCAGGGCCGGCGCTTCGACTATAGCCCTGTCCGGATGCGGACCGATGAGATGATCGC
CTTTGCCAGCGAGTTTGATCCGCAACCGATGCATCTGGACGAAGAGGTCGGCAGGAGCAGCATTCTCGGCGGCCTCGCCG
CTTCCGGCTGGCACACGAGCGCCGTCGGCATGCGGATGATGATCGAGGCCTTTCTCGGCGATTCATCTTCGCAGGGGTCA
CCGGGCGTCGACTTCATGGAGTGGAAGAAGCCGGTTCTTGCCGGAGATATCCTTTCAGGTTTCAGCTTGGTCCTGGAAGC
GCGCCCGTCGAAAACCAAGCCCGCGATCGGCCTCGTCAAATTTCGCAACGAGATCGAGAACCAGAGCGGCGAGACCGTGG
CGGCTTCGGAATGTTCCGTCATGTTCAGGCGCCGCAATGGCGAGGCGCGCTCATGA

Upstream 100 bases:

>100_bases
CATGGACCGATCGACGGATGAAACATGCGCAAGCTGAAGCATTGCGGCGACCCTCGCGCCTCTGGCAGGACGCGCGGCGC
CGTAAGGGAGAGAAAGAGGC

Downstream 100 bases:

>100_bases
TGACGCTGGAGGAACTCTACCAGACCGGGCGCAAGGTCGTCACCGGCAGCCTGACCTTCACCGCCGAGGACATCATTCGC
TTTGCCCGCAATTTCGACCC

Product: dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MLYFEDFIQGRRFDYSPVRMRTDEMIAFASEFDPQPMHLDEEVGRSSILGGLAASGWHTSAVGMRMMIEAFLGDSSSQGS
PGVDFMEWKKPVLAGDILSGFSLVLEARPSKTKPAIGLVKFRNEIENQSGETVAASECSVMFRRRNGEARS

Sequences:

>Translated_151_residues
MLYFEDFIQGRRFDYSPVRMRTDEMIAFASEFDPQPMHLDEEVGRSSILGGLAASGWHTSAVGMRMMIEAFLGDSSSQGS
PGVDFMEWKKPVLAGDILSGFSLVLEARPSKTKPAIGLVKFRNEIENQSGETVAASECSVMFRRRNGEARS
>Mature_151_residues
MLYFEDFIQGRRFDYSPVRMRTDEMIAFASEFDPQPMHLDEEVGRSSILGGLAASGWHTSAVGMRMMIEAFLGDSSSQGS
PGVDFMEWKKPVLAGDILSGFSLVLEARPSKTKPAIGLVKFRNEIENQSGETVAASECSVMFRRRNGEARS

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 16748; Mature: 16748

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYFEDFIQGRRFDYSPVRMRTDEMIAFASEFDPQPMHLDEEVGRSSILGGLAASGWHTS
CCCHHHHHCCCCCCCCCCEECHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHCCCCCHH
AVGMRMMIEAFLGDSSSQGSPGVDFMEWKKPVLAGDILSGFSLVLEARPSKTKPAIGLVK
HHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHH
FRNEIENQSGETVAASECSVMFRRRNGEARS
HHHHHCCCCCCEEEHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLYFEDFIQGRRFDYSPVRMRTDEMIAFASEFDPQPMHLDEEVGRSSILGGLAASGWHTS
CCCHHHHHCCCCCCCCCCEECHHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHCCCCCHH
AVGMRMMIEAFLGDSSSQGSPGVDFMEWKKPVLAGDILSGFSLVLEARPSKTKPAIGLVK
HHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHH
FRNEIENQSGETVAASECSVMFRRRNGEARS
HHHHHCCCCCCEEEHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]