| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397451
Identifier: 150397451
GI number: 150397451
Start: 2328434
End: 2328724
Strand: Reverse
Name: 150397451
Synonym: Smed_2251
Alternate gene names: NA
Gene position: 2328724-2328434 (Counterclockwise)
Preceding gene: 150397458
Following gene: 150397450
Centisome position: 61.58
GC content: 64.6
Gene sequence:
>291_bases ATGAGCACAGGCGCCAACCGTATTCTCGATGATCTCGCCCGGCTGATGACGGATGCCGCAGGCGCGGCCCAAGGGGTGCG GCGCGAGGTCGAGGCGGCATTTCGGGCGCAGACCGAAAACTGGCTGAACTCACTTGACGTCGTCAAGCGCGAGGAGTTCG AGGCGGTCAAGGAGATGGCGGCACGGGCTCGGGACGAGAACGATTCTCTGCTGGCTCGCATCGAAGCACTCGAAGCGCGT TTGGCAGTGGCCAGCGGTCCCGCAGCGGGCGACATCACGACCGGCAAGTAA
Upstream 100 bases:
>100_bases TTCGTCGCCGGCGTCATTTTCCTTGCATCCTCCCTTCGGGGGCCCTACCTGAATCAGAGACTTCGCCGCATGTGGCGGAC TGGAAATGGAGACCAGAAAG
Downstream 100 bases:
>100_bases AACCCTATTGACGCAGCTCTCGCTGAGAGACGCTGTGAGCGGCCGTGCCGCCGCCCTCATTGCCCATTCTATCCACGTCG CCAGCTTTCCGCATTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSTGANRILDDLARLMTDAAGAAQGVRREVEAAFRAQTENWLNSLDVVKREEFEAVKEMAARARDENDSLLARIEALEAR LAVASGPAAGDITTGK
Sequences:
>Translated_96_residues MSTGANRILDDLARLMTDAAGAAQGVRREVEAAFRAQTENWLNSLDVVKREEFEAVKEMAARARDENDSLLARIEALEAR LAVASGPAAGDITTGK >Mature_95_residues STGANRILDDLARLMTDAAGAAQGVRREVEAAFRAQTENWLNSLDVVKREEFEAVKEMAARARDENDSLLARIEALEARL AVASGPAAGDITTGK
Specific function: Unknown
COG id: COG2960
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10316; Mature: 10184
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGANRILDDLARLMTDAAGAAQGVRREVEAAFRAQTENWLNSLDVVKREEFEAVKEMA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARARDENDSLLARIEALEARLAVASGPAAGDITTGK HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure STGANRILDDLARLMTDAAGAAQGVRREVEAAFRAQTENWLNSLDVVKREEFEAVKEMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARARDENDSLLARIEALEARLAVASGPAAGDITTGK HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA