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The map label for this gene is petP [H]

Identifier: 150397444

GI number: 150397444

Start: 2322086

End: 2322568

Strand: Direct

Name: petP [H]

Synonym: Smed_2244

Alternate gene names: 150397444

Gene position: 2322086-2322568 (Clockwise)

Preceding gene: 150397443

Following gene: 150397445

Centisome position: 61.4

GC content: 60.04

Gene sequence:

>483_bases
GTGGCCGGCCAGACCAAGAACAAGAGCCTGGGCATAAACAATGACCCGGAGGACGATGAGGGCACGATCGATTTCGAGAT
CATCGAACTGCTCTTTTTCGCCTATCGCGACTTCACCGGCGATCCGGACGCCATTCTCGAGAAGAGCGGATTTGGCCGCG
CGCACCATCGCGTCGTGCATTTCGTCAACCGCGAACCGGGAATGACCGTCGCTGACCTCCTCGACACTTTGAAGATCACC
AAGCAGAGCCTGGCCCGCGTGCTCAAACAGTTGATCGATTCCGGCTATATCCGGCAGGTGACCGGTCCCGAAGACCGGCG
TCAACGCATGCTTTACACGACAACCGAGGGCCGGGCCTTGGCGCGAGCCCTTGCCGAGCCACAGTCCCGCCGCATAGCGG
ATGCATTGGCAAAGGCGGGACCGGGCGCACGGGAAACGGTGAAGCGCTTTCTGGCAAATATGATGAACGACACTGTGGGC
TGA

Upstream 100 bases:

>100_bases
CGGCCGGAAAGCCTGAGACTTCGTGGAAATATGTCAACCAAACTGACATATATTGCAGTATGTTTCGTGAACGGCATATC
GATCGAAAGGAAACGACTGC

Downstream 100 bases:

>100_bases
TCAACCGGCATGCTCCTCTTGATCCTCGCCGAACAGAGGAGAAAAACACGCAGCTGTTTGCGCCTCGCTGGACGCGCGGC
GCTGTAAGGGGGTGGGCTCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAGQTKNKSLGINNDPEDDEGTIDFEIIELLFFAYRDFTGDPDAILEKSGFGRAHHRVVHFVNREPGMTVADLLDTLKIT
KQSLARVLKQLIDSGYIRQVTGPEDRRQRMLYTTTEGRALARALAEPQSRRIADALAKAGPGARETVKRFLANMMNDTVG

Sequences:

>Translated_160_residues
MAGQTKNKSLGINNDPEDDEGTIDFEIIELLFFAYRDFTGDPDAILEKSGFGRAHHRVVHFVNREPGMTVADLLDTLKIT
KQSLARVLKQLIDSGYIRQVTGPEDRRQRMLYTTTEGRALARALAEPQSRRIADALAKAGPGARETVKRFLANMMNDTVG
>Mature_159_residues
AGQTKNKSLGINNDPEDDEGTIDFEIIELLFFAYRDFTGDPDAILEKSGFGRAHHRVVHFVNREPGMTVADLLDTLKITK
QSLARVLKQLIDSGYIRQVTGPEDRRQRMLYTTTEGRALARALAEPQSRRIADALAKAGPGARETVKRFLANMMNDTVG

Specific function: Necessary for photosynthetic and respiratory growth [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17834; Mature: 17702

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQTKNKSLGINNDPEDDEGTIDFEIIELLFFAYRDFTGDPDAILEKSGFGRAHHRVVH
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHH
FVNREPGMTVADLLDTLKITKQSLARVLKQLIDSGYIRQVTGPEDRRQRMLYTTTEGRAL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHCCEEEECCCHHHH
ARALAEPQSRRIADALAKAGPGARETVKRFLANMMNDTVG
HHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AGQTKNKSLGINNDPEDDEGTIDFEIIELLFFAYRDFTGDPDAILEKSGFGRAHHRVVH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHH
FVNREPGMTVADLLDTLKITKQSLARVLKQLIDSGYIRQVTGPEDRRQRMLYTTTEGRAL
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHCCEEEECCCHHHH
ARALAEPQSRRIADALAKAGPGARETVKRFLANMMNDTVG
HHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]