Click here to switch to the map view.

The map label for this gene is 150397422

Identifier: 150397422

GI number: 150397422

Start: 2299152

End: 2299445

Strand: Reverse

Name: 150397422

Synonym: Smed_2222

Alternate gene names: NA

Gene position: 2299445-2299152 (Counterclockwise)

Preceding gene: 150397423

Following gene: 150397421

Centisome position: 60.8

GC content: 60.88

Gene sequence:

>294_bases
ATGACCACTTACGTCGTGCTTCTCAATTGGACCGAGCAGGGGATCCGGAACGTACGCGAGTCGCCGAAGCGGCTCGATGC
GGCCAAGAAGGTGCTCGAGGATATGGGCGGGTCCTTCAAGGACGTCTACCTGACGATGGGCGAACATGACCTGGTGGCGA
TCTGCGAAGCGCCGGACGATGCGGTCGCTGCGCGTTTTGCCTTGACGCTCGGCATGAACGGAAACGTCCGAACCCGTACT
CTGAAGGCCTTCCCCGAGGCGGCTTACCGCGAACTTATCGGTACGCTGGGATAG

Upstream 100 bases:

>100_bases
CGAGGCCGCGCATGAACGCGCGAATGCGCGCCAACCTTTTCAGATAAGAGCATCTTGGACGCCTTCGACCGAAGGCGGGA
TGCTTTGCGGGAGGTGTGAG

Downstream 100 bases:

>100_bases
AGCGGGACAAGGAAAAGAGTGTACGGCTTCCGTTCGGAAAGCCCTTCGGCCTTATCCGGCCTGGCGGCCACCTTCTCCCC
GCAAGCGGGGCGAAGGAACC

Product: GYD family protein

Products: NA

Alternate protein names: GYD Domain Protein

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MTTYVVLLNWTEQGIRNVRESPKRLDAAKKVLEDMGGSFKDVYLTMGEHDLVAICEAPDDAVAARFALTLGMNGNVRTRT
LKAFPEAAYRELIGTLG

Sequences:

>Translated_97_residues
MTTYVVLLNWTEQGIRNVRESPKRLDAAKKVLEDMGGSFKDVYLTMGEHDLVAICEAPDDAVAARFALTLGMNGNVRTRT
LKAFPEAAYRELIGTLG
>Mature_96_residues
TTYVVLLNWTEQGIRNVRESPKRLDAAKKVLEDMGGSFKDVYLTMGEHDLVAICEAPDDAVAARFALTLGMNGNVRTRTL
KAFPEAAYRELIGTLG

Specific function: Unknown

COG id: COG4274

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10703; Mature: 10572

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYVVLLNWTEQGIRNVRESPKRLDAAKKVLEDMGGSFKDVYLTMGEHDLVAICEAPDD
CCEEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCH
AVAARFALTLGMNGNVRTRTLKAFPEAAYRELIGTLG
HHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTYVVLLNWTEQGIRNVRESPKRLDAAKKVLEDMGGSFKDVYLTMGEHDLVAICEAPDD
CEEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCH
AVAARFALTLGMNGNVRTRTLKAFPEAAYRELIGTLG
HHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA