Click here to switch to the map view.

The map label for this gene is 150397409

Identifier: 150397409

GI number: 150397409

Start: 2288962

End: 2289756

Strand: Direct

Name: 150397409

Synonym: Smed_2209

Alternate gene names: NA

Gene position: 2288962-2289756 (Clockwise)

Preceding gene: 150397406

Following gene: 150397414

Centisome position: 60.52

GC content: 62.39

Gene sequence:

>795_bases
ATGTTAGGCACGATGGCATTGATCCTGGCACTGAGCGGAGCTCCGATACAGTCGGCAGCCATTTCCGCTGACGTCGACGT
AGAACTCCTGCTGGCCGTCGACATGTCCGGCTCGATGGACATGGAGGAGGCGCGCGTGCAGCGCTCCGGATATCTGCAGG
CGCTGCGGCATCCGGATTTCATCAATGCGGTCCAGGGAGGCCTCCTCGGGCGGATCGCCATAGGCTATTTCGAATGGGCA
GGGCTCGTAAACGAGGCCTCAGTCGTGAGCTGGCAAGTGATCGAAAGTTCTGCCGACGCCGAAGCCTTCGCCGGCAAGCT
GGAGGCTCGGCCAATCGGAACACGGCGCGGCACCTCGATCTCGAACGCGATCCTGTTTGGTTCGGACCTCATCGATTCGA
ACGCATATTCGGGTACGCGAAGGGTCATCGACATCTCCGGCGACGGGCCGAACAATACCGGGCCGCCGGTTACACCCGCA
CGCAACGACGCCCTATCGCGGGGCATTATAATCAACGGTCTTGCAATCCTCATCCGCCCTTCGGTCTCGACCGGGCCGCT
CGACCGGTATTACGCCGAATGCGTCATTGGCGGCCCCGGCTCCTTCGTGTTGCCCGTGCATGAACCCGAGGATTTCGCGG
TCGCAATCCGTCAGAAGCTGATCCTCGAGGTAAGCGGGCGCGAGCCCGATCCGGCGCTCCGCCTGGCGGCCGGCGAAAAT
GCGGCGGACTGCATGATAGGCGAGAAGCTCCGGCCGGGATTTCTCGACAGGGTCTATCCGGAACTGGATCGCTGA

Upstream 100 bases:

>100_bases
GACATCGACCCGGACGGCGACATCGCTCTAAGGCGCCTCGCGGTACCCGGGTGCAGGGGCAGAACGCCCGACGCGTGATC
CACGGTGATTGGCTGATGCG

Downstream 100 bases:

>100_bases
CGCTTGCTCTTCATATCCCCACCTTCCTGTATGCCACAGGAATGGTGAGGACGAAAGAAGTGCGGTCGGGTGCGGTAGCA
GCGCAGGCGGGTTTCCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein; Von Willebrand Factor Type A Domain Prot; Lipoprotein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLGTMALILALSGAPIQSAAISADVDVELLLAVDMSGSMDMEEARVQRSGYLQALRHPDFINAVQGGLLGRIAIGYFEWA
GLVNEASVVSWQVIESSADAEAFAGKLEARPIGTRRGTSISNAILFGSDLIDSNAYSGTRRVIDISGDGPNNTGPPVTPA
RNDALSRGIIINGLAILIRPSVSTGPLDRYYAECVIGGPGSFVLPVHEPEDFAVAIRQKLILEVSGREPDPALRLAAGEN
AADCMIGEKLRPGFLDRVYPELDR

Sequences:

>Translated_264_residues
MLGTMALILALSGAPIQSAAISADVDVELLLAVDMSGSMDMEEARVQRSGYLQALRHPDFINAVQGGLLGRIAIGYFEWA
GLVNEASVVSWQVIESSADAEAFAGKLEARPIGTRRGTSISNAILFGSDLIDSNAYSGTRRVIDISGDGPNNTGPPVTPA
RNDALSRGIIINGLAILIRPSVSTGPLDRYYAECVIGGPGSFVLPVHEPEDFAVAIRQKLILEVSGREPDPALRLAAGEN
AADCMIGEKLRPGFLDRVYPELDR
>Mature_264_residues
MLGTMALILALSGAPIQSAAISADVDVELLLAVDMSGSMDMEEARVQRSGYLQALRHPDFINAVQGGLLGRIAIGYFEWA
GLVNEASVVSWQVIESSADAEAFAGKLEARPIGTRRGTSISNAILFGSDLIDSNAYSGTRRVIDISGDGPNNTGPPVTPA
RNDALSRGIIINGLAILIRPSVSTGPLDRYYAECVIGGPGSFVLPVHEPEDFAVAIRQKLILEVSGREPDPALRLAAGEN
AADCMIGEKLRPGFLDRVYPELDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28001; Mature: 28001

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTMALILALSGAPIQSAAISADVDVELLLAVDMSGSMDMEEARVQRSGYLQALRHPDF
CCHHHEEHHHCCCCCCCHHEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH
INAVQGGLLGRIAIGYFEWAGLVNEASVVSWQVIESSADAEAFAGKLEARPIGTRRGTSI
HHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCC
SNAILFGSDLIDSNAYSGTRRVIDISGDGPNNTGPPVTPARNDALSRGIIINGLAILIRP
CCEEEECCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCEEEECEEEEEEC
SVSTGPLDRYYAECVIGGPGSFVLPVHEPEDFAVAIRQKLILEVSGREPDPALRLAAGEN
CCCCCCCHHHEEEEEECCCCCEEEECCCCCHHHHHHHHHHEEEECCCCCCCCEEEECCCC
AADCMIGEKLRPGFLDRVYPELDR
CHHHHCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MLGTMALILALSGAPIQSAAISADVDVELLLAVDMSGSMDMEEARVQRSGYLQALRHPDF
CCHHHEEHHHCCCCCCCHHEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH
INAVQGGLLGRIAIGYFEWAGLVNEASVVSWQVIESSADAEAFAGKLEARPIGTRRGTSI
HHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCC
SNAILFGSDLIDSNAYSGTRRVIDISGDGPNNTGPPVTPARNDALSRGIIINGLAILIRP
CCEEEECCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHCCEEEECEEEEEEC
SVSTGPLDRYYAECVIGGPGSFVLPVHEPEDFAVAIRQKLILEVSGREPDPALRLAAGEN
CCCCCCCHHHEEEEEECCCCCEEEECCCCCHHHHHHHHHHEEEECCCCCCCCEEEECCCC
AADCMIGEKLRPGFLDRVYPELDR
CHHHHCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA