Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is fct [H]

Identifier: 150397393

GI number: 150397393

Start: 2268614

End: 2270788

Strand: Direct

Name: fct [H]

Synonym: Smed_2192

Alternate gene names: 150397393

Gene position: 2268614-2270788 (Clockwise)

Preceding gene: 150397392

Following gene: 150397394

Centisome position: 59.99

GC content: 58.48

Gene sequence:

>2175_bases
ATGCCCCCCAGAACCGCCTCCCTATTGCCGCTCATTCGCGCGGCCCTCGCTGGAACCTCCGCCCTCGCCCTCGTAGCAAC
GGCACAGGCACAGGACGTAGGGCAGGAATCCGTTTCCGACGACCAGTCGACTGACCTCGAAACATTGGTCGTCAATGGCA
GCGGCGGGGTGATCACGGCGGAAGGCTATGTCGCAACCAGCAGCGCGACCGGCGCCAAGGTCGATACGCCGTTCCTGGAG
ACGCCGCAATCGATCTCCACGGTCACCGAGCAGCAGCTGAAGGATCGAAATCCACAGACGCTGCTGGAAACGCTGGCCTA
CACGCCGGGGACGCGCGTCGGCGCCTATGGCTTCGATCCACGCTTCGATGCATTTTTCGTACGCGGTTTCGACGTGACCT
TTACCGGTGTGTTCCGTGACAACCTCCGCCAACCGGCCGCGGTCGACTCGGTCTTCAAGACTGAACCTTACGGGCTTGAA
GGCGTCTCGATCCTGCGCGGCCCTTCCTCGGCCCTTTACGGCGCAACCGGCGCCGGAGGCCTTTACAACCTTATTACCAA
GCGCCCGACGGAAGAAATGCTGCGGGAGGTGCAGGTTCAATATGGCAACCACGACCGCTATCAGGGCCAATTCGACTTTT
CAGGTCCGGTGAACGAGACCGATCCCATCTATTACCGCCTGACTGGCTTGCTGCGCGATGCCGACACGGAGCAGGTCGGC
CTCTCCGACGATCGCGCCTATATAGCGCCGGCCTTCACCTGGAAGCCCGACGAAGATACCAAGCTGACCGTACTTAGTGA
ATATTCACGCACCAAGTCCGGAGGCACGGCGACTTACTACAATGACCCGCTTACCGGTGAAGTCACCGACATATTCGCCG
GCAATCCCGACTTCAACGACTCGATCCAGAAGCAGGGTCGGATCGGCTATGAGTTTGAGCACCGGCTCAACGATACGTTC
GTGTTCCGCCAAAACGCCCGCGTGTCTACTCTGAACATCGATGCGGACTGGGCCTTCGCCTACGCCCCGAATGCCGCGGA
TCCGACCTTGCTCGACAGCAGCGCCGGCACCTATGACGAACGCCTGACCGCGTTCGTCATCGATAATCAGCTCGAAGCCA
AATTCGATACCGGTGCGTTCGAGCATACGTTGGTCGCCGGCGTCGACTATACGAAGCTGCGTTTCCGGGCACTCGACGGG
CGCGGCGTTTCGCCGCCGCTCGATACGAAGAATCCGACCAAGGGGCGTCCGGTCGAGGCGATTGATTTCGACACACGTAC
CGTCCAGGATCAGTGGCAACTCGGTACATACCTCCAAGACCAGATCCGCTACGACGCATGGACCTTGACGATGGGCGGGC
GCTACGACTGGGTCTCGACCGATACGGACACCACGGTTCTGGCCACCGACTCGCTAACCACGGTATCGCAAAAGGACAAG
GAGTTCTCCGGCCGTATAGGGCTCACCTATCAGACGGATTTCGGTCTCGCGCCTTATATCAGCTACTCGACGGCATTCAT
GCCCAATGCCGGTTTCAACAGGGCGACGAACCAGCCGTTCAAGCCTACCGAGAGCGAGCAGGAAGAAATCGGCATCAAGT
ATCTCCTGCCGAACAGCAACACGCTGATTACGGCAGCTCTCTTCAACATCGATCAGAAGAATGGCCTGTATCTCGAAGCC
GCCGGGGATACTGCAATCCAGGTTCAGCGCGGAAAACTGCGCTCGCGCGGTTTCGAGATCGAAGCGAATACCAGCCTTGA
CAATGGTCTTTCGCTGATAGTTTCTTATGCATATACCGACGTGAAGATTATTCAAGGATCTACCGGTACGACTGGCAACC
ATGTCTCATCCGCACCAAAGCACATGGCATCGATATGGGCCCATTATACACTGCCGGAAGGTGGTCCATTTTACGGATTC
AGCCTAGGCGGCGGCGCGCGTTTCGTCGGCGCAAGCTACGGCAATGACCAGAACACCTTCAAGAATAGTTCGCGTATCCT
CTTCGATGCTTCCGTCGGATACGACTTCGCAGCGATCGACCAGAAATATGAGGGCCTGCAGCTGCAAGTGAATGCCACCA
ACCTGTTTGACCGCCGCGATGCGGTATGCACTGCGGGTTATTGCCATCGCGATCAGGGCCGCACCGTTATCGGCTCTCTG
CGCTACAACTGGTAA

Upstream 100 bases:

>100_bases
ATGATTAGGAAAGTCATGAAATCGGCTTGCGCTTCCTCTAATCATGAGTGATTAGCTCACCTTATAGAACATAACTTATA
TCTCTATAAGGTTGCGTCGC

Downstream 100 bases:

>100_bases
GCGTCATGGCAGCCGGTGCGCGTGAAAGCATGGCGGTATTCGACGGGCCGAAAGGACTGTCGGCGGCCTTTGCCGGACCG
CATGCCTGGTGCAACGAGAA

Product: ferrioxamine B receptor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 724; Mature: 723

Protein sequence:

>724_residues
MPPRTASLLPLIRAALAGTSALALVATAQAQDVGQESVSDDQSTDLETLVVNGSGGVITAEGYVATSSATGAKVDTPFLE
TPQSISTVTEQQLKDRNPQTLLETLAYTPGTRVGAYGFDPRFDAFFVRGFDVTFTGVFRDNLRQPAAVDSVFKTEPYGLE
GVSILRGPSSALYGATGAGGLYNLITKRPTEEMLREVQVQYGNHDRYQGQFDFSGPVNETDPIYYRLTGLLRDADTEQVG
LSDDRAYIAPAFTWKPDEDTKLTVLSEYSRTKSGGTATYYNDPLTGEVTDIFAGNPDFNDSIQKQGRIGYEFEHRLNDTF
VFRQNARVSTLNIDADWAFAYAPNAADPTLLDSSAGTYDERLTAFVIDNQLEAKFDTGAFEHTLVAGVDYTKLRFRALDG
RGVSPPLDTKNPTKGRPVEAIDFDTRTVQDQWQLGTYLQDQIRYDAWTLTMGGRYDWVSTDTDTTVLATDSLTTVSQKDK
EFSGRIGLTYQTDFGLAPYISYSTAFMPNAGFNRATNQPFKPTESEQEEIGIKYLLPNSNTLITAALFNIDQKNGLYLEA
AGDTAIQVQRGKLRSRGFEIEANTSLDNGLSLIVSYAYTDVKIIQGSTGTTGNHVSSAPKHMASIWAHYTLPEGGPFYGF
SLGGGARFVGASYGNDQNTFKNSSRILFDASVGYDFAAIDQKYEGLQLQVNATNLFDRRDAVCTAGYCHRDQGRTVIGSL
RYNW

Sequences:

>Translated_724_residues
MPPRTASLLPLIRAALAGTSALALVATAQAQDVGQESVSDDQSTDLETLVVNGSGGVITAEGYVATSSATGAKVDTPFLE
TPQSISTVTEQQLKDRNPQTLLETLAYTPGTRVGAYGFDPRFDAFFVRGFDVTFTGVFRDNLRQPAAVDSVFKTEPYGLE
GVSILRGPSSALYGATGAGGLYNLITKRPTEEMLREVQVQYGNHDRYQGQFDFSGPVNETDPIYYRLTGLLRDADTEQVG
LSDDRAYIAPAFTWKPDEDTKLTVLSEYSRTKSGGTATYYNDPLTGEVTDIFAGNPDFNDSIQKQGRIGYEFEHRLNDTF
VFRQNARVSTLNIDADWAFAYAPNAADPTLLDSSAGTYDERLTAFVIDNQLEAKFDTGAFEHTLVAGVDYTKLRFRALDG
RGVSPPLDTKNPTKGRPVEAIDFDTRTVQDQWQLGTYLQDQIRYDAWTLTMGGRYDWVSTDTDTTVLATDSLTTVSQKDK
EFSGRIGLTYQTDFGLAPYISYSTAFMPNAGFNRATNQPFKPTESEQEEIGIKYLLPNSNTLITAALFNIDQKNGLYLEA
AGDTAIQVQRGKLRSRGFEIEANTSLDNGLSLIVSYAYTDVKIIQGSTGTTGNHVSSAPKHMASIWAHYTLPEGGPFYGF
SLGGGARFVGASYGNDQNTFKNSSRILFDASVGYDFAAIDQKYEGLQLQVNATNLFDRRDAVCTAGYCHRDQGRTVIGSL
RYNW
>Mature_723_residues
PPRTASLLPLIRAALAGTSALALVATAQAQDVGQESVSDDQSTDLETLVVNGSGGVITAEGYVATSSATGAKVDTPFLET
PQSISTVTEQQLKDRNPQTLLETLAYTPGTRVGAYGFDPRFDAFFVRGFDVTFTGVFRDNLRQPAAVDSVFKTEPYGLEG
VSILRGPSSALYGATGAGGLYNLITKRPTEEMLREVQVQYGNHDRYQGQFDFSGPVNETDPIYYRLTGLLRDADTEQVGL
SDDRAYIAPAFTWKPDEDTKLTVLSEYSRTKSGGTATYYNDPLTGEVTDIFAGNPDFNDSIQKQGRIGYEFEHRLNDTFV
FRQNARVSTLNIDADWAFAYAPNAADPTLLDSSAGTYDERLTAFVIDNQLEAKFDTGAFEHTLVAGVDYTKLRFRALDGR
GVSPPLDTKNPTKGRPVEAIDFDTRTVQDQWQLGTYLQDQIRYDAWTLTMGGRYDWVSTDTDTTVLATDSLTTVSQKDKE
FSGRIGLTYQTDFGLAPYISYSTAFMPNAGFNRATNQPFKPTESEQEEIGIKYLLPNSNTLITAALFNIDQKNGLYLEAA
GDTAIQVQRGKLRSRGFEIEANTSLDNGLSLIVSYAYTDVKIIQGSTGTTGNHVSSAPKHMASIWAHYTLPEGGPFYGFS
LGGGARFVGASYGNDQNTFKNSSRILFDASVGYDFAAIDQKYEGLQLQVNATNLFDRRDAVCTAGYCHRDQGRTVIGSLR
YNW

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=712, Percent_Identity=36.376404494382, Blast_Score=375, Evalue=1e-105,
Organism=Escherichia coli, GI1787024, Length=734, Percent_Identity=23.1607629427793, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI1788478, Length=166, Percent_Identity=28.3132530120482, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79380; Mature: 79249

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRTASLLPLIRAALAGTSALALVATAQAQDVGQESVSDDQSTDLETLVVNGSGGVITA
CCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCHHHCCCCCCCCEEEEEEECCCCEEEE
EGYVATSSATGAKVDTPFLETPQSISTVTEQQLKDRNPQTLLETLAYTPGTRVGAYGFDP
CCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
RFDAFFVRGFDVTFTGVFRDNLRQPAAVDSVFKTEPYGLEGVSILRGPSSALYGATGAGG
CCCEEEEEECEEEEEEEEHHCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCH
LYNLITKRPTEEMLREVQVQYGNHDRYQGQFDFSGPVNETDPIYYRLTGLLRDADTEQVG
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEEEHHHCCCCCCCC
LSDDRAYIAPAFTWKPDEDTKLTVLSEYSRTKSGGTATYYNDPLTGEVTDIFAGNPDFND
CCCCCEEEEEEEECCCCCCCEEEEEEHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCH
SIQKQGRIGYEFEHRLNDTFVFRQNARVSTLNIDADWAFAYAPNAADPTLLDSSAGTYDE
HHHHCCCCCEEEHHCCCCEEEEECCCEEEEEEECCCEEEEECCCCCCCCEECCCCCCHHH
RLTAFVIDNQLEAKFDTGAFEHTLVAGVDYTKLRFRALDGRGVSPPLDTKNPTKGRPVEA
CEEEEEECCCCCCEECCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEE
IDFDTRTVQDQWQLGTYLQDQIRYDAWTLTMGGRYDWVSTDTDTTVLATDSLTTVSQKDK
EECCCCCCHHHHHHHHHHHHHHCEEEEEEEECCEEEEECCCCCCEEEEECCEEEHHHCCC
EFSGRIGLTYQTDFGLAPYISYSTAFMPNAGFNRATNQPFKPTESEQEEIGIKYLLPNSN
CCCCEEEEEEECCCCCCCEECCCEEECCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCC
TLITAALFNIDQKNGLYLEAAGDTAIQVQRGKLRSRGFEIEANTSLDNGLSLIVSYAYTD
CEEEEEEEECCCCCCEEEEECCCCEEEEECCHHHHCCEEEEECCCCCCCCEEEEEEEECE
VKIIQGSTGTTGNHVSSAPKHMASIWAHYTLPEGGPFYGFSLGGGARFVGASYGNDQNTF
EEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCEEEEEECCCEEEEECCCCCCCHHC
KNSSRILFDASVGYDFAAIDQKYEGLQLQVNATNLFDRRDAVCTAGYCHRDQGRTVIGSL
CCCCEEEEEECCCCCCHHHCCCCCCEEEEEECCCCCCCCCCEEECCCEECCCCCEEEEEE
RYNW
EECC
>Mature Secondary Structure 
PPRTASLLPLIRAALAGTSALALVATAQAQDVGQESVSDDQSTDLETLVVNGSGGVITA
CCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCHHHCCCCCCCCEEEEEEECCCCEEEE
EGYVATSSATGAKVDTPFLETPQSISTVTEQQLKDRNPQTLLETLAYTPGTRVGAYGFDP
CCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
RFDAFFVRGFDVTFTGVFRDNLRQPAAVDSVFKTEPYGLEGVSILRGPSSALYGATGAGG
CCCEEEEEECEEEEEEEEHHCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCH
LYNLITKRPTEEMLREVQVQYGNHDRYQGQFDFSGPVNETDPIYYRLTGLLRDADTEQVG
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEEEHHHCCCCCCCC
LSDDRAYIAPAFTWKPDEDTKLTVLSEYSRTKSGGTATYYNDPLTGEVTDIFAGNPDFND
CCCCCEEEEEEEECCCCCCCEEEEEEHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCH
SIQKQGRIGYEFEHRLNDTFVFRQNARVSTLNIDADWAFAYAPNAADPTLLDSSAGTYDE
HHHHCCCCCEEEHHCCCCEEEEECCCEEEEEEECCCEEEEECCCCCCCCEECCCCCCHHH
RLTAFVIDNQLEAKFDTGAFEHTLVAGVDYTKLRFRALDGRGVSPPLDTKNPTKGRPVEA
CEEEEEECCCCCCEECCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEE
IDFDTRTVQDQWQLGTYLQDQIRYDAWTLTMGGRYDWVSTDTDTTVLATDSLTTVSQKDK
EECCCCCCHHHHHHHHHHHHHHCEEEEEEEECCEEEEECCCCCCEEEEECCEEEHHHCCC
EFSGRIGLTYQTDFGLAPYISYSTAFMPNAGFNRATNQPFKPTESEQEEIGIKYLLPNSN
CCCCEEEEEEECCCCCCCEECCCEEECCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCC
TLITAALFNIDQKNGLYLEAAGDTAIQVQRGKLRSRGFEIEANTSLDNGLSLIVSYAYTD
CEEEEEEEECCCCCCEEEEECCCCEEEEECCHHHHCCEEEEECCCCCCCCEEEEEEEECE
VKIIQGSTGTTGNHVSSAPKHMASIWAHYTLPEGGPFYGFSLGGGARFVGASYGNDQNTF
EEEEECCCCCCCCCCCHHHHHHHHHHHEEECCCCCCEEEEEECCCEEEEECCCCCCCHHC
KNSSRILFDASVGYDFAAIDQKYEGLQLQVNATNLFDRRDAVCTAGYCHRDQGRTVIGSL
CCCCEEEEEECCCCCCHHHCCCCCCEEEEEECCCCCCCCCCEEECCCEECCCCCEEEEEE
RYNW
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]