Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397365

Identifier: 150397365

GI number: 150397365

Start: 2233979

End: 2235424

Strand: Reverse

Name: 150397365

Synonym: Smed_2164

Alternate gene names: NA

Gene position: 2235424-2233979 (Counterclockwise)

Preceding gene: 150397366

Following gene: 150397364

Centisome position: 59.11

GC content: 60.3

Gene sequence:

>1446_bases
ATGTACGAGAAGGAGAAAGACCTCATTGGCGCATTCCTGCGCGGAGAGGTGGACCGTCGCGGCCTGTTGAAGGGCCTTGG
CGCGGCAGGCCTGACGGCGGGCACCGCCGGCACCCTGTTCAACATGATGTCGACCCAGGCCCTTGCTGCCGACTTCGACT
GGAAGGCACATTCCGGCAAGTCGCTGAAACTGTTGCTGAACAAGCATCCTTACGCGGATGCGATGATTGCCAATCTGCAG
GCGTTCAAGGACCTTACCGGTATCGAAGTCACCTATGACGTCTTCCCGGAGGACGTCTATTTCGACAAGGTGACGGCGGC
GCTTTCTTCCGGCTCGTCGGAATACGACGCCTTCATGACCGGCGCTTACATGACCTGGACCTACGGGCCGGCCGGCTGGA
TCACCGACCTCAATGAATGGATCAAAGATCCGTCGAAGACCAATCCGCAATATGGCTGGGACGACTTCCTGCCGGGCGTC
AAGGCATCCTGCGCCTGGAACGGTCAGCCGGGCGGCGCGCTCGGTTCGGAAGATGCCAAGCAGTGGTGCATTCCGTGGGG
CTACGAGCAGAACAATCTCTCCTATAACCAGGAAATGTTCGAAAAGGCCGGCGCCAGCGTTCCGAAGAACCTCGATGAAC
TCGTCGCTACGGCGGCAAAGCTCAACAAGGATGTCGGCGGCGGTGTCTACGGCATCGGCGTGCGTGGTTCCCGTTCCTGG
GCAACCATTCATCCGGGTTTCCTCTCCGGCTACGCCAATTTCGGCCAGAAGGATCTGAACGTCTCGGAGGACGGCAAGCT
TTCGGCCGCGATGAACACGGCGGAGTCCAAGTCCTTCCACGCCAAATGGGTGCAGATGATCCAGGAAAGCGGCCCCAAGG
ACTGGTCGACCTATACCTGGTATCAGGTCGGCACCGACCTCGGCGCCGGCGCTTCCGCCATGATCTACGACGCCGACATC
CTCGGCTATTTCATGAATGGCGGCGACAACAAGATGGCCGGCAAGCTCGCTTACGCGCCCTTTGCCGCCAACCCTGAGGC
GAAGGCTCCTACGCCGAACATCTGGATCTGGTCGCTGGCCATGTCCAATTTCGCGAAGGATAAGGATGCGACCTGGTATT
TCCTGCAATGGGCATCGGGTCTCGAGCACGCGATCTTCGGCGCAACCAAGATGGACTTCGTCAACCCGGTCCGGGCATCC
GTCTGGAAGGACGAGATCTTCCGGGAGCGGCTGAACAAGAGCTATCCCGGTTATGTGGAGATGCACGACGTTTCGGCGCC
GGGCGCGAAGATCCACTTCACCGCCCAGCCTCTCTTCTTCGATCTCACCACCGAATGGGCGGCGACGCTGCAGAAGATGG
TGGCGAAGGAAGTGCCGGTCGACGAAGGTCTCGACAGGCTTGCCGAGAGCATCAACCGGCAACTTGCGGAAGCCGGGCTC
GGCTGA

Upstream 100 bases:

>100_bases
CGCGATGCGACGAAAGTCGGCGTGCGGTCCGGTAGGCAATACCGGTTGGGTAGCCGGCAGCTCAGTCGAGCAGTTTTACC
CGTAGTGGAGGAGAGAACAG

Downstream 100 bases:

>100_bases
TCGCACTTCCGGCTTGGAGCGGAAGCGGGCGAACATCGGACGTCCGCATCCGGCTCCAGGCCAGCCCGTCACCGGCGGGC
CGCCGTTTCGGCACGAAAAA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: ABC Sugar Transporter; Sugar ABC Transporter

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MYEKEKDLIGAFLRGEVDRRGLLKGLGAAGLTAGTAGTLFNMMSTQALAADFDWKAHSGKSLKLLLNKHPYADAMIANLQ
AFKDLTGIEVTYDVFPEDVYFDKVTAALSSGSSEYDAFMTGAYMTWTYGPAGWITDLNEWIKDPSKTNPQYGWDDFLPGV
KASCAWNGQPGGALGSEDAKQWCIPWGYEQNNLSYNQEMFEKAGASVPKNLDELVATAAKLNKDVGGGVYGIGVRGSRSW
ATIHPGFLSGYANFGQKDLNVSEDGKLSAAMNTAESKSFHAKWVQMIQESGPKDWSTYTWYQVGTDLGAGASAMIYDADI
LGYFMNGGDNKMAGKLAYAPFAANPEAKAPTPNIWIWSLAMSNFAKDKDATWYFLQWASGLEHAIFGATKMDFVNPVRAS
VWKDEIFRERLNKSYPGYVEMHDVSAPGAKIHFTAQPLFFDLTTEWAATLQKMVAKEVPVDEGLDRLAESINRQLAEAGL
G

Sequences:

>Translated_481_residues
MYEKEKDLIGAFLRGEVDRRGLLKGLGAAGLTAGTAGTLFNMMSTQALAADFDWKAHSGKSLKLLLNKHPYADAMIANLQ
AFKDLTGIEVTYDVFPEDVYFDKVTAALSSGSSEYDAFMTGAYMTWTYGPAGWITDLNEWIKDPSKTNPQYGWDDFLPGV
KASCAWNGQPGGALGSEDAKQWCIPWGYEQNNLSYNQEMFEKAGASVPKNLDELVATAAKLNKDVGGGVYGIGVRGSRSW
ATIHPGFLSGYANFGQKDLNVSEDGKLSAAMNTAESKSFHAKWVQMIQESGPKDWSTYTWYQVGTDLGAGASAMIYDADI
LGYFMNGGDNKMAGKLAYAPFAANPEAKAPTPNIWIWSLAMSNFAKDKDATWYFLQWASGLEHAIFGATKMDFVNPVRAS
VWKDEIFRERLNKSYPGYVEMHDVSAPGAKIHFTAQPLFFDLTTEWAATLQKMVAKEVPVDEGLDRLAESINRQLAEAGL
G
>Mature_481_residues
MYEKEKDLIGAFLRGEVDRRGLLKGLGAAGLTAGTAGTLFNMMSTQALAADFDWKAHSGKSLKLLLNKHPYADAMIANLQ
AFKDLTGIEVTYDVFPEDVYFDKVTAALSSGSSEYDAFMTGAYMTWTYGPAGWITDLNEWIKDPSKTNPQYGWDDFLPGV
KASCAWNGQPGGALGSEDAKQWCIPWGYEQNNLSYNQEMFEKAGASVPKNLDELVATAAKLNKDVGGGVYGIGVRGSRSW
ATIHPGFLSGYANFGQKDLNVSEDGKLSAAMNTAESKSFHAKWVQMIQESGPKDWSTYTWYQVGTDLGAGASAMIYDADI
LGYFMNGGDNKMAGKLAYAPFAANPEAKAPTPNIWIWSLAMSNFAKDKDATWYFLQWASGLEHAIFGATKMDFVNPVRAS
VWKDEIFRERLNKSYPGYVEMHDVSAPGAKIHFTAQPLFFDLTTEWAATLQKMVAKEVPVDEGLDRLAESINRQLAEAGL
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52731; Mature: 52731

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEKEKDLIGAFLRGEVDRRGLLKGLGAAGLTAGTAGTLFNMMSTQALAADFDWKAHSGK
CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
SLKLLLNKHPYADAMIANLQAFKDLTGIEVTYDVFPEDVYFDKVTAALSSGSSEYDAFMT
EEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHEE
GAYMTWTYGPAGWITDLNEWIKDPSKTNPQYGWDDFLPGVKASCAWNGQPGGALGSEDAK
CCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCC
QWCIPWGYEQNNLSYNQEMFEKAGASVPKNLDELVATAAKLNKDVGGGVYGIGVRGSRSW
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCE
ATIHPGFLSGYANFGQKDLNVSEDGKLSAAMNTAESKSFHAKWVQMIQESGPKDWSTYTW
EEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEE
YQVGTDLGAGASAMIYDADILGYFMNGGDNKMAGKLAYAPFAANPEAKAPTPNIWIWSLA
EEECCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEH
MSNFAKDKDATWYFLQWASGLEHAIFGATKMDFVNPVRASVWKDEIFRERLNKSYPGYVE
HHHHCCCCCCCEEEEEECCCCHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEE
MHDVSAPGAKIHFTAQPLFFDLTTEWAATLQKMVAKEVPVDEGLDRLAESINRQLAEAGL
EEECCCCCCEEEEEECCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MYEKEKDLIGAFLRGEVDRRGLLKGLGAAGLTAGTAGTLFNMMSTQALAADFDWKAHSGK
CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
SLKLLLNKHPYADAMIANLQAFKDLTGIEVTYDVFPEDVYFDKVTAALSSGSSEYDAFMT
EEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHEE
GAYMTWTYGPAGWITDLNEWIKDPSKTNPQYGWDDFLPGVKASCAWNGQPGGALGSEDAK
CCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCC
QWCIPWGYEQNNLSYNQEMFEKAGASVPKNLDELVATAAKLNKDVGGGVYGIGVRGSRSW
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCE
ATIHPGFLSGYANFGQKDLNVSEDGKLSAAMNTAESKSFHAKWVQMIQESGPKDWSTYTW
EEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEE
YQVGTDLGAGASAMIYDADILGYFMNGGDNKMAGKLAYAPFAANPEAKAPTPNIWIWSLA
EEECCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEH
MSNFAKDKDATWYFLQWASGLEHAIFGATKMDFVNPVRASVWKDEIFRERLNKSYPGYVE
HHHHCCCCCCCEEEEEECCCCHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEE
MHDVSAPGAKIHFTAQPLFFDLTTEWAATLQKMVAKEVPVDEGLDRLAESINRQLAEAGL
EEECCCCCCEEEEEECCEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA