| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is blh [H]
Identifier: 150397324
GI number: 150397324
Start: 2187984
End: 2188322
Strand: Reverse
Name: blh [H]
Synonym: Smed_2123
Alternate gene names: 150397324
Gene position: 2188322-2187984 (Counterclockwise)
Preceding gene: 150397325
Following gene: 150397319
Centisome position: 57.86
GC content: 63.42
Gene sequence:
>339_bases ATGGACATTCGCCAGATCAACGATGAGTACTCGGTCTCCGGCCAGATCACCGTCGACGAACTCGACGAAATCAAGGCACT CGGCTTCAAGTCCATCGTCTGCCATCGCCCGGATTTCGAGGCGCCCGATCAGCCGACCTTCGACGCGATCTCCGCGCGTG CCCGGGAGCTGGGGCTCGAGATCACCCATATTCCGGTCGGCCCGATGGGCGTTACCGCGGACGCGGTGAAGAGCATGGTG GACGCCCTCGACGAGTTTCCCCGCCCGATGCTGGGTTACTGCCGCTCCGGCGCCCGCTCCACCGCCGTTTACCAGCAGAC ATTGCACATTCGCGGTTGA
Upstream 100 bases:
>100_bases GCTTCAGCCTGTCTTTCGCGGTTTCATGACCATGCCTTGACGATTGACGCCGCCCGGCGGCGGGCCTAAATCAAGGCAAC GCTTTTCTTGAGGGACGCAC
Downstream 100 bases:
>100_bases GGCGCCCGAAAGGCGACGCGGGCGTTCCGGCACCTGCCGTATCCGCGGCATAAGCGATCTTGTCGGGCCGCAGGGCCCAG GCGTATCGAAGGCGGTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MDIRQINDEYSVSGQITVDELDEIKALGFKSIVCHRPDFEAPDQPTFDAISARARELGLEITHIPVGPMGVTADAVKSMV DALDEFPRPMLGYCRSGARSTAVYQQTLHIRG
Sequences:
>Translated_112_residues MDIRQINDEYSVSGQITVDELDEIKALGFKSIVCHRPDFEAPDQPTFDAISARARELGLEITHIPVGPMGVTADAVKSMV DALDEFPRPMLGYCRSGARSTAVYQQTLHIRG >Mature_112_residues MDIRQINDEYSVSGQITVDELDEIKALGFKSIVCHRPDFEAPDQPTFDAISARARELGLEITHIPVGPMGVTADAVKSMV DALDEFPRPMLGYCRSGARSTAVYQQTLHIRG
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 12349; Mature: 12349
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRQINDEYSVSGQITVDELDEIKALGFKSIVCHRPDFEAPDQPTFDAISARARELGLE CCCCCCCCCCCCCCCEEHHHHHHHHHCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCE ITHIPVGPMGVTADAVKSMVDALDEFPRPMLGYCRSGARSTAVYQQTLHIRG EEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure MDIRQINDEYSVSGQITVDELDEIKALGFKSIVCHRPDFEAPDQPTFDAISARARELGLE CCCCCCCCCCCCCCCEEHHHHHHHHHCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHCCE ITHIPVGPMGVTADAVKSMVDALDEFPRPMLGYCRSGARSTAVYQQTLHIRG EEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]