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The map label for this gene is aapJ [H]

Identifier: 150397299

GI number: 150397299

Start: 2158833

End: 2159864

Strand: Direct

Name: aapJ [H]

Synonym: Smed_2098

Alternate gene names: 150397299

Gene position: 2158833-2159864 (Clockwise)

Preceding gene: 150397298

Following gene: 150397300

Centisome position: 57.08

GC content: 59.69

Gene sequence:

>1032_bases
ATGAAACTGATCAAGCTTCTCACGGCCGGTGTTTTTGCCGGTCTCGCCGTTACCACAGGTCAGGCGTCTGCCTCCGTCCT
CGACACCGTCAAGCAGCGCGGCACACTGAACTGCGGCACCGACAACACCGCTCCCGGTTTCGGCTACCTCAATACGACCA
CAGGCCAGATGGAAGGGCTGGACGTAGACTTCTGCAGGGCGGTTGCAGCGGCGGTCCTCGGCGACGCGTCCAAGGTCAAA
TTCGTCACCGTAACGGACAAAAGCCGCTTCGACGCCGTCCTGACGAACCAGGTGGACGTCGTCTTCGCACACACGACCAT
GAAGCCGGCCCGCGAATCCTCGATCGCCATAGATTTTCTGCCGGTCAACTTCTATGACGGCACGGGTATCATGGTGAAGA
CGGATTCCGAGGTGGTGCAGTTCGCCGACCTCGAAGGTGCGACGTTCTGCACGACTCAGGGTTCCGTGACCGAAACCGTG
CTTACCAGCGCTTTCAAGGCCAATGGATGGCAGGGCTCCAAGGTTCTCACCTACGAAAACCTCGAAAAGCTGTTCGCCGC
GCTCAACTCCGGTCGCTGCAACGCGATGAGCACAGACAAGTCCGCGCTTGCGGCCTGGGCCGGCAACTCGCCGAAGCCGT
CCGATTATCTCATCCTGCCGGAAACCCTCGACAAGTCGCCCTTCGCTGGTTTCGTCGCGGCCAATGATTCCAAATGGCGC
AATGCGCTGCGCTGGATCACCTACGGCCTGTTCCAGGCGGAGGAGTCCGACATCACACAGGCCAATCTCGAAGAAAAGCT
GAAGAGCGACGACCCGTTCGTTCAGAAGTTTCTCGGCGTGGGAGGCGGCTACGGCAAGGACTTCGGCCTTCCGGACGATT
TCGTTGCGCAGGCCATAAAGGCGATGGGCAATTACGGCGAGATTTACGCCCGCAATCTCGGTCCGGATACGAGCATGTTC
CTTGACCGGAAAGGTACGCCTAACGCTCTTTGGACAGAGGGCGGCGCGATCTACTCGCCCCTCTGGAACTGA

Upstream 100 bases:

>100_bases
CGGCAAGAGCCGCTGTTGCCCTATCACCCAATCACAACTCGGCAAGAGAGCAGGACTCTGCACCTTCGTGCGGGCCGTTC
GCGATATAAAGGGGAATGCA

Downstream 100 bases:

>100_bases
TCCTCTCTACTGACCGAGCCGAGGCGGACGACCCGCCTCGGCTCCTATCCCGGTTCCAGGTATCCCGACATGAATGTGCA
TCATGCGAAAGCGGCCGAAC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKLIKLLTAGVFAGLAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGLDVDFCRAVAAAVLGDASKVK
FVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFLPVNFYDGTGIMVKTDSEVVQFADLEGATFCTTQGSVTETV
LTSAFKANGWQGSKVLTYENLEKLFAALNSGRCNAMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWR
NALRWITYGLFQAEESDITQANLEEKLKSDDPFVQKFLGVGGGYGKDFGLPDDFVAQAIKAMGNYGEIYARNLGPDTSMF
LDRKGTPNALWTEGGAIYSPLWN

Sequences:

>Translated_343_residues
MKLIKLLTAGVFAGLAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGLDVDFCRAVAAAVLGDASKVK
FVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFLPVNFYDGTGIMVKTDSEVVQFADLEGATFCTTQGSVTETV
LTSAFKANGWQGSKVLTYENLEKLFAALNSGRCNAMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWR
NALRWITYGLFQAEESDITQANLEEKLKSDDPFVQKFLGVGGGYGKDFGLPDDFVAQAIKAMGNYGEIYARNLGPDTSMF
LDRKGTPNALWTEGGAIYSPLWN
>Mature_343_residues
MKLIKLLTAGVFAGLAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGLDVDFCRAVAAAVLGDASKVK
FVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFLPVNFYDGTGIMVKTDSEVVQFADLEGATFCTTQGSVTETV
LTSAFKANGWQGSKVLTYENLEKLFAALNSGRCNAMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWR
NALRWITYGLFQAEESDITQANLEEKLKSDDPFVQKFLGVGGGYGKDFGLPDDFVAQAIKAMGNYGEIYARNLGPDTSMF
LDRKGTPNALWTEGGAIYSPLWN

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36805; Mature: 36805

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIKLLTAGVFAGLAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGL
CHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCEECCCCCCCCCCCEEECCCCCCCCC
DVDFCRAVAAAVLGDASKVKFVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFL
CHHHHHHHHHHHHCCCCCEEEEEEECCCHHCEEECCCEEEEEEECCCCCCCCCCEEEEEE
PVNFYDGTGIMVKTDSEVVQFADLEGATFCTTQGSVTETVLTSAFKANGWQGSKVLTYEN
EEEEECCCEEEEECCCHHEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEHHH
LEKLFAALNSGRCNAMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWR
HHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHH
NALRWITYGLFQAEESDITQANLEEKLKSDDPFVQKFLGVGGGYGKDFGLPDDFVAQAIK
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AMGNYGEIYARNLGPDTSMFLDRKGTPNALWTEGGAIYSPLWN
HHCCCCEEEEECCCCCCCEEEECCCCCCCEECCCCEEECCCCC
>Mature Secondary Structure
MKLIKLLTAGVFAGLAVTTGQASASVLDTVKQRGTLNCGTDNTAPGFGYLNTTTGQMEGL
CHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCEECCCCCCCCCCCEEECCCCCCCCC
DVDFCRAVAAAVLGDASKVKFVTVTDKSRFDAVLTNQVDVVFAHTTMKPARESSIAIDFL
CHHHHHHHHHHHHCCCCCEEEEEEECCCHHCEEECCCEEEEEEECCCCCCCCCCEEEEEE
PVNFYDGTGIMVKTDSEVVQFADLEGATFCTTQGSVTETVLTSAFKANGWQGSKVLTYEN
EEEEECCCEEEEECCCHHEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEHHH
LEKLFAALNSGRCNAMSTDKSALAAWAGNSPKPSDYLILPETLDKSPFAGFVAANDSKWR
HHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHH
NALRWITYGLFQAEESDITQANLEEKLKSDDPFVQKFLGVGGGYGKDFGLPDDFVAQAIK
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
AMGNYGEIYARNLGPDTSMFLDRKGTPNALWTEGGAIYSPLWN
HHCCCCEEEEECCCCCCCEEEECCCCCCCEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]