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The map label for this gene is recN [H]

Identifier: 150397272

GI number: 150397272

Start: 2124395

End: 2126068

Strand: Reverse

Name: recN [H]

Synonym: Smed_2071

Alternate gene names: 150397272

Gene position: 2126068-2124395 (Counterclockwise)

Preceding gene: 150397273

Following gene: 150397271

Centisome position: 56.22

GC content: 64.46

Gene sequence:

>1674_bases
ATGCTCGCCCAGCTCGCGATCCGAGATATCGTCCTGATCGAACGGCTTGACCTCAGCTTCGATGTCGGGCTGTCGGTGCT
GACCGGCGAAACCGGTGCGGGCAAATCCATTCTCCTCGACAGTCTGTCGCTTGCGCTGGGCGGGCGCGGCGACGGTTCGC
TCGTGCGCCATGGCGAGGACAGGGGCCAGGTGAGCGCCGTGTTCGATGTCCCGGCCGGTCATTCGGCGCGGCTCCTTTTG
CGGGAAAACGGCATTGATGACGATGGCGATCTGATCTTCCGTCGCGTGCAGTCGGCGGACGGCCGCACCAAGGCCTTTAT
CAACGATCAGCCGGTCAGCGTGCAGCTGATGCGCCAGGTCGGCCAGACGCTTGTTGAAATCCATGGCCAGCATGACGATC
GAGCGCTCGTCGATACCGACGCGCACCGCACGCTCGTCGATGCTTTTGGCGGCACCACCGATGCGGCGGAAGCGGTCGCG
AACCTTTACCGCGCCTGGAAGGATGCCGAGCGGGGGCTGAAGAAACATCGGGAGAAGGTGGAGGCCGCATCCCGGGAGGC
GGACTATCTCCGCTCCTCCGTCGAGGAGCTCGAGACACTATCGCCGCGCGATGGCGAAGAGGAGGAGCTGGCGGAGAGCC
GCGCCCGCATGATGAAGGTCGAACGCATCGCCGGCGATATCAGCGAGGCAGCCGAGTTTCTGAACGGCAATGCATCGCCT
GTTCCGCTCATCGCATCGCTCGTCCGGCGGCTGGAGCGCAAGAGCCATGAGGCTCCCGGCCTCCTTGAAGAGACCGTCGA
ACTTCTGGACGGTGCACTGAACCAGCTTGCGGATGCCCAGATGGCGGTCGAGCGCGCGTTGCGCAACACCGAGTTCGATC
CCAAGGAGCTCGAACGCGTCGAAGAGCGGCTTTTCGCATTGCGCGCAGCGGGCCGGAAATACTCCGTCCCCGTCACCGAA
TTGCCCGCCCTTGCCGTGCGGATGATCGCCGATCTCGCCGATCTCGATGCAGGCGAGGAGAAGCTGCAGCAACTCGAGGT
ACGGGTCGGCGAATGCAAAGCGGCGTTTGACGCTGCATCGCAGTCGCTGTCGGAAAAGCGGCACAATACGGCCGTTGCAC
TTTCGGCGGCCGTTATGGAAGAACTGCCGGCGCTGAAGCTGGAACGCGCCCGCTTCATGGTGGAGGTGACGAGCGATCCG
GAATCGCCTACGGCCGACGGGATCGACTCAGTCGAGTTCCACGTACAGACCAATCCCGGCACCAGGCCGGGACCGATCAT
GAAGGTGGCTTCGGGCGGCGAGCTTTCGCGGTTCCTGCTCGCGCTGAAAGTGGCGCTTGCCGACCGGGGTTCGGCGCCGA
CTCTCGTCTTCGACGAGATCGACACGGGTGTTGGTGGTGCCGTGGCAGATGCGATCGGTCAGCGCCTGAAACGCCTTTCG
AAGACCGTCCAGGTGCTTTCGGTCACCCATGCGCCGCAGGTTGCCGCGCGTGCGGCCACGCATCTCCTGATCTCGAAGGG
TCCCTCGGCGGAAAAAGCCGAGATGATCGCGACTCGCGTCGCTCGCATGGACGATGCGGCACGCACCGAAGAGATAGCCC
GTATGCTGGCAGGGGCCTCGATCACCGAAGAGGCGAGGGCCGCGGCTGCGCGATTGCTCGCCGGCAATGCCTGA

Upstream 100 bases:

>100_bases
TAGAGCCGCGCGAAACCGGCACATCCTGGATCGCGCGCGCGGGCAAAAACCTTATCGGCGCGTGATTTCCAGGCGCCCGA
CAACGAAGATATGAAACCGG

Downstream 100 bases:

>100_bases
TCGCACCGGGTTTGTTTCCGGCCGGCTTCTCTGAAGCGCCGCGCTTTGCCGGACGCGCAAACTTCGCCTCGGAAGTGTGC
ATTGCTTGATGATTTTCTCC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MLAQLAIRDIVLIERLDLSFDVGLSVLTGETGAGKSILLDSLSLALGGRGDGSLVRHGEDRGQVSAVFDVPAGHSARLLL
RENGIDDDGDLIFRRVQSADGRTKAFINDQPVSVQLMRQVGQTLVEIHGQHDDRALVDTDAHRTLVDAFGGTTDAAEAVA
NLYRAWKDAERGLKKHREKVEAASREADYLRSSVEELETLSPRDGEEEELAESRARMMKVERIAGDISEAAEFLNGNASP
VPLIASLVRRLERKSHEAPGLLEETVELLDGALNQLADAQMAVERALRNTEFDPKELERVEERLFALRAAGRKYSVPVTE
LPALAVRMIADLADLDAGEEKLQQLEVRVGECKAAFDAASQSLSEKRHNTAVALSAAVMEELPALKLERARFMVEVTSDP
ESPTADGIDSVEFHVQTNPGTRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLKRLS
KTVQVLSVTHAPQVAARAATHLLISKGPSAEKAEMIATRVARMDDAARTEEIARMLAGASITEEARAAAARLLAGNA

Sequences:

>Translated_557_residues
MLAQLAIRDIVLIERLDLSFDVGLSVLTGETGAGKSILLDSLSLALGGRGDGSLVRHGEDRGQVSAVFDVPAGHSARLLL
RENGIDDDGDLIFRRVQSADGRTKAFINDQPVSVQLMRQVGQTLVEIHGQHDDRALVDTDAHRTLVDAFGGTTDAAEAVA
NLYRAWKDAERGLKKHREKVEAASREADYLRSSVEELETLSPRDGEEEELAESRARMMKVERIAGDISEAAEFLNGNASP
VPLIASLVRRLERKSHEAPGLLEETVELLDGALNQLADAQMAVERALRNTEFDPKELERVEERLFALRAAGRKYSVPVTE
LPALAVRMIADLADLDAGEEKLQQLEVRVGECKAAFDAASQSLSEKRHNTAVALSAAVMEELPALKLERARFMVEVTSDP
ESPTADGIDSVEFHVQTNPGTRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLKRLS
KTVQVLSVTHAPQVAARAATHLLISKGPSAEKAEMIATRVARMDDAARTEEIARMLAGASITEEARAAAARLLAGNA
>Mature_557_residues
MLAQLAIRDIVLIERLDLSFDVGLSVLTGETGAGKSILLDSLSLALGGRGDGSLVRHGEDRGQVSAVFDVPAGHSARLLL
RENGIDDDGDLIFRRVQSADGRTKAFINDQPVSVQLMRQVGQTLVEIHGQHDDRALVDTDAHRTLVDAFGGTTDAAEAVA
NLYRAWKDAERGLKKHREKVEAASREADYLRSSVEELETLSPRDGEEEELAESRARMMKVERIAGDISEAAEFLNGNASP
VPLIASLVRRLERKSHEAPGLLEETVELLDGALNQLADAQMAVERALRNTEFDPKELERVEERLFALRAAGRKYSVPVTE
LPALAVRMIADLADLDAGEEKLQQLEVRVGECKAAFDAASQSLSEKRHNTAVALSAAVMEELPALKLERARFMVEVTSDP
ESPTADGIDSVEFHVQTNPGTRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLKRLS
KTVQVLSVTHAPQVAARAATHLLISKGPSAEKAEMIATRVARMDDAARTEEIARMLAGASITEEARAAAARLLAGNA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=565, Percent_Identity=32.0353982300885, Blast_Score=296, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59904; Mature: 59904

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQLAIRDIVLIERLDLSFDVGLSVLTGETGAGKSILLDSLSLALGGRGDGSLVRHGED
CCHHHHHHHHHHHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCC
RGQVSAVFDVPAGHSARLLLRENGIDDDGDLIFRRVQSADGRTKAFINDQPVSVQLMRQV
CCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
GQTLVEIHGQHDDRALVDTDAHRTLVDAFGGTTDAAEAVANLYRAWKDAERGLKKHREKV
HHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAASREADYLRSSVEELETLSPRDGEEEELAESRARMMKVERIAGDISEAAEFLNGNASP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
VPLIASLVRRLERKSHEAPGLLEETVELLDGALNQLADAQMAVERALRNTEFDPKELERV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EERLFALRAAGRKYSVPVTELPALAVRMIADLADLDAGEEKLQQLEVRVGECKAAFDAAS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QSLSEKRHNTAVALSAAVMEELPALKLERARFMVEVTSDPESPTADGIDSVEFHVQTNPG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCC
TRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLKRLS
CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
KTVQVLSVTHAPQVAARAATHLLISKGPSAEKAEMIATRVARMDDAARTEEIARMLAGAS
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ITEEARAAAARLLAGNA
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLAQLAIRDIVLIERLDLSFDVGLSVLTGETGAGKSILLDSLSLALGGRGDGSLVRHGED
CCHHHHHHHHHHHHHHCCCHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCC
RGQVSAVFDVPAGHSARLLLRENGIDDDGDLIFRRVQSADGRTKAFINDQPVSVQLMRQV
CCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
GQTLVEIHGQHDDRALVDTDAHRTLVDAFGGTTDAAEAVANLYRAWKDAERGLKKHREKV
HHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAASREADYLRSSVEELETLSPRDGEEEELAESRARMMKVERIAGDISEAAEFLNGNASP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC
VPLIASLVRRLERKSHEAPGLLEETVELLDGALNQLADAQMAVERALRNTEFDPKELERV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EERLFALRAAGRKYSVPVTELPALAVRMIADLADLDAGEEKLQQLEVRVGECKAAFDAAS
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QSLSEKRHNTAVALSAAVMEELPALKLERARFMVEVTSDPESPTADGIDSVEFHVQTNPG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCC
TRPGPIMKVASGGELSRFLLALKVALADRGSAPTLVFDEIDTGVGGAVADAIGQRLKRLS
CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
KTVQVLSVTHAPQVAARAATHLLISKGPSAEKAEMIATRVARMDDAARTEEIARMLAGAS
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ITEEARAAAARLLAGNA
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA