| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is atsA [H]
Identifier: 150397266
GI number: 150397266
Start: 2116263
End: 2117891
Strand: Direct
Name: atsA [H]
Synonym: Smed_2065
Alternate gene names: 150397266
Gene position: 2116263-2117891 (Clockwise)
Preceding gene: 150397265
Following gene: 150397267
Centisome position: 55.96
GC content: 60.47
Gene sequence:
>1629_bases ATGCAACCAACCGAGAGAGCCTTGATGAGCAAGCGCCCCAATATCGTCCTCGTACTGGCTGATGACATGGGTTTTTCCGA CCTCGGCTGCTATGGCGGAGAAATCTCGACGCCCAATCTGGACAGCCTCGCGCGTCGCGGCGCGCGCTTCACGCAGTTCT ATAACACGGCGCGATGCAGCCCATCGCGTGCGTCGCTTCTGACCGGGCTTCATCCTCACCAGACCGGCATCGGTATTCTG ACCAACAACGACTTGCCGCGAGGCTATCCGGGTAACCTGAACCTGCGATGCGCCACGCTGGCGGAAATGCTGAAAGCTGC CGGATATGCGACATGCCTCTCGGGGAAATGGCACCTGGCGAGCGAAATGCACGAACCGAACGATACCTGGCCGACGAGAC GCGGTTTCGACCGGTTCTTCGGCACGCTCACCGGCTGCGGCAGCTTCTATACGCCCGGAACGCTGACCCGCGGCGAATGC GACGCCTCGGCCGAAGCACTCGACCCGGCATTCTTCTATACCGACGCCATCGCCTCTCATGCCGCGGAATTCGTCACCGA ACAGTCCGCGGCAGGCAATCCGTTCTTTCTCTACGCCGCCTTCACCGCTCCCCATTGGCCGCTTCATGCACATCCCGGCG ATATCGACCGTTATCGGGGGCGCTTTGACGAAGGCTGGGACGTTCTGCGCGAAAAGCGGATGAAGCGGCTGGTCGAGGAA GGAATTCTTACGGCGAGCACCGCAATCAGCGCGCGCGATCCCACGCAGCCCGCCTGGTCTGATACGAAGGAAAAGGCTTG GCAAGTCAAACGAATGCAGGCCTATGCTGCCCAAATCGAGCGAATGGACCGCGGGATCGGCAAAATCATCGAGGCACTTA AGACCGGCGGCACCTTCGAAAACACGGCTTTCATCTTCCTGTCCGACAATGGAGCATCGCCGGAGGATCTGCCGCAATTC GACGCCGAAAAATTCATGCGGCGAACGGACATTCTTCCACGGGCGACGCGCGATGGACTACCGATGCGTGTCGGCAATAC TCCCGATATCTGCCCTGGTGCCGAAGACACATATTCCAGCTATGGCCGTGCCTGGGCAAACCTGTCCAATACGCCCTTCC GCTTCTACAAACGGTGGGTGCATGAAGGCGGCATCGCCACGCCATTGATTGTCCATTGGCCCGCAGGAGGACTCGATTGC GGCGCGATCCTCGATCAACCCGCCCAGCTCGTCGATATCGCCCCAACCATTCTGGAAGTGACCGGTGCAAGCTATCCGCT TCAGGCTATCGGCCGGGAAATCGCTCCGCTGGAAGGCTGCAGCCTGCTTCCTGCATTGAAGGGCGAAATACTCTTCGAGA GGCCGCTCTACTGGGAACACACGGGTAATGCCGCAATCCGCCTCGGACGATGGAAGCTTGTTCGCGAAGAGCCAAATGGC TGGGAACTTTACGACCTTGCAGCCGATCGCACAGAGCTGAACGACGTGGCGCCGGGCAACCCTGAGGTCGTCGCGGACCT CCGGGCAAAATGGGAAGCCTGGGCAGAGCGCATCGGCGTCATCCCCTGGGAGGTAACGCTCGGCATTTACGAGGAACGCG GTCTGCATCCGACCTGGGCAGCCGGCTGA
Upstream 100 bases:
>100_bases GCCTGCCCTGCGGGTTCGGCGATCCCTTACAAGCACATCCGACACAGCTGCCGGCATCGGCCGGCGGAAAGGAGCGGGCG TGCCAGATAACTGAGAACCG
Downstream 100 bases:
>100_bases GTGCATCAAGAGCCGGTCCGCCAGGCGAGATCACCCGGCCGGGTCCGGCATCAAAAGGAAAGTCACGACCATGGCTTCGG TCGAAATTCAGAGTGTCAAA
Product: sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MQPTERALMSKRPNIVLVLADDMGFSDLGCYGGEISTPNLDSLARRGARFTQFYNTARCSPSRASLLTGLHPHQTGIGIL TNNDLPRGYPGNLNLRCATLAEMLKAAGYATCLSGKWHLASEMHEPNDTWPTRRGFDRFFGTLTGCGSFYTPGTLTRGEC DASAEALDPAFFYTDAIASHAAEFVTEQSAAGNPFFLYAAFTAPHWPLHAHPGDIDRYRGRFDEGWDVLREKRMKRLVEE GILTASTAISARDPTQPAWSDTKEKAWQVKRMQAYAAQIERMDRGIGKIIEALKTGGTFENTAFIFLSDNGASPEDLPQF DAEKFMRRTDILPRATRDGLPMRVGNTPDICPGAEDTYSSYGRAWANLSNTPFRFYKRWVHEGGIATPLIVHWPAGGLDC GAILDQPAQLVDIAPTILEVTGASYPLQAIGREIAPLEGCSLLPALKGEILFERPLYWEHTGNAAIRLGRWKLVREEPNG WELYDLAADRTELNDVAPGNPEVVADLRAKWEAWAERIGVIPWEVTLGIYEERGLHPTWAAG
Sequences:
>Translated_542_residues MQPTERALMSKRPNIVLVLADDMGFSDLGCYGGEISTPNLDSLARRGARFTQFYNTARCSPSRASLLTGLHPHQTGIGIL TNNDLPRGYPGNLNLRCATLAEMLKAAGYATCLSGKWHLASEMHEPNDTWPTRRGFDRFFGTLTGCGSFYTPGTLTRGEC DASAEALDPAFFYTDAIASHAAEFVTEQSAAGNPFFLYAAFTAPHWPLHAHPGDIDRYRGRFDEGWDVLREKRMKRLVEE GILTASTAISARDPTQPAWSDTKEKAWQVKRMQAYAAQIERMDRGIGKIIEALKTGGTFENTAFIFLSDNGASPEDLPQF DAEKFMRRTDILPRATRDGLPMRVGNTPDICPGAEDTYSSYGRAWANLSNTPFRFYKRWVHEGGIATPLIVHWPAGGLDC GAILDQPAQLVDIAPTILEVTGASYPLQAIGREIAPLEGCSLLPALKGEILFERPLYWEHTGNAAIRLGRWKLVREEPNG WELYDLAADRTELNDVAPGNPEVVADLRAKWEAWAERIGVIPWEVTLGIYEERGLHPTWAAG >Mature_542_residues MQPTERALMSKRPNIVLVLADDMGFSDLGCYGGEISTPNLDSLARRGARFTQFYNTARCSPSRASLLTGLHPHQTGIGIL TNNDLPRGYPGNLNLRCATLAEMLKAAGYATCLSGKWHLASEMHEPNDTWPTRRGFDRFFGTLTGCGSFYTPGTLTRGEC DASAEALDPAFFYTDAIASHAAEFVTEQSAAGNPFFLYAAFTAPHWPLHAHPGDIDRYRGRFDEGWDVLREKRMKRLVEE GILTASTAISARDPTQPAWSDTKEKAWQVKRMQAYAAQIERMDRGIGKIIEALKTGGTFENTAFIFLSDNGASPEDLPQF DAEKFMRRTDILPRATRDGLPMRVGNTPDICPGAEDTYSSYGRAWANLSNTPFRFYKRWVHEGGIATPLIVHWPAGGLDC GAILDQPAQLVDIAPTILEVTGASYPLQAIGREIAPLEGCSLLPALKGEILFERPLYWEHTGNAAIRLGRWKLVREEPNG WELYDLAADRTELNDVAPGNPEVVADLRAKWEAWAERIGVIPWEVTLGIYEERGLHPTWAAG
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI109389362, Length=313, Percent_Identity=31.629392971246, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI59797060, Length=535, Percent_Identity=26.9158878504673, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI38569405, Length=322, Percent_Identity=30.4347826086957, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI38569407, Length=323, Percent_Identity=30.3405572755418, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI53831991, Length=493, Percent_Identity=27.1805273833671, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI71852584, Length=518, Percent_Identity=26.4478764478764, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI4503899, Length=476, Percent_Identity=27.3109243697479, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI58743319, Length=330, Percent_Identity=29.3939393939394, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI146229331, Length=270, Percent_Identity=34.8148148148148, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI146229329, Length=270, Percent_Identity=34.8148148148148, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI6005990, Length=270, Percent_Identity=34.8148148148148, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI146229324, Length=270, Percent_Identity=34.8148148148148, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI45430057, Length=232, Percent_Identity=35.7758620689655, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI4506919, Length=448, Percent_Identity=28.125, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI31742482, Length=140, Percent_Identity=42.1428571428571, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI157266309, Length=138, Percent_Identity=42.0289855072464, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI71852586, Length=162, Percent_Identity=40.1234567901235, Blast_Score=96, Evalue=9e-20, Organism=Escherichia coli, GI87081924, Length=495, Percent_Identity=25.6565656565657, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1790112, Length=309, Percent_Identity=29.4498381877023, Blast_Score=102, Evalue=9e-23, Organism=Escherichia coli, GI1790233, Length=145, Percent_Identity=35.1724137931034, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115533416, Length=534, Percent_Identity=24.5318352059925, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI115533418, Length=525, Percent_Identity=24.5714285714286, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17559078, Length=276, Percent_Identity=30.7971014492754, Blast_Score=88, Evalue=9e-18, Organism=Drosophila melanogaster, GI24666109, Length=527, Percent_Identity=26.7552182163188, Blast_Score=142, Evalue=8e-34, Organism=Drosophila melanogaster, GI281366397, Length=315, Percent_Identity=29.8412698412698, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI281366395, Length=315, Percent_Identity=29.8412698412698, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24666163, Length=315, Percent_Identity=29.8412698412698, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI281363223, Length=478, Percent_Identity=24.4769874476987, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24666175, Length=453, Percent_Identity=28.0353200883002, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI24653364, Length=349, Percent_Identity=26.0744985673352, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922168, Length=349, Percent_Identity=25.7879656160458, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 59991; Mature: 59991
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00149 SULFATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPTERALMSKRPNIVLVLADDMGFSDLGCYGGEISTPNLDSLARRGARFTQFYNTARCS CCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCC PSRASLLTGLHPHQTGIGILTNNDLPRGYPGNLNLRCATLAEMLKAAGYATCLSGKWHLA CHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEECCCCHHH SEMHEPNDTWPTRRGFDRFFGTLTGCGSFYTPGTLTRGECDASAEALDPAFFYTDAIASH HHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHH AAEFVTEQSAAGNPFFLYAAFTAPHWPLHAHPGDIDRYRGRFDEGWDVLREKRMKRLVEE HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHH GILTASTAISARDPTQPAWSDTKEKAWQVKRMQAYAAQIERMDRGIGKIIEALKTGGTFE CCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NTAFIFLSDNGASPEDLPQFDAEKFMRRTDILPRATRDGLPMRVGNTPDICPGAEDTYSS CEEEEEEECCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHH YGRAWANLSNTPFRFYKRWVHEGGIATPLIVHWPAGGLDCGAILDQPAQLVDIAPTILEV HHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHH TGASYPLQAIGREIAPLEGCSLLPALKGEILFERPLYWEHTGNAAIRLGRWKLVREEPNG CCCCCCHHHHCCCCCCCCCCCCCHHHCCCEEEECCEEEEECCCCEEEEEEEEEEEECCCC WELYDLAADRTELNDVAPGNPEVVADLRAKWEAWAERIGVIPWEVTLGIYEERGLHPTWA CEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCC AG CC >Mature Secondary Structure MQPTERALMSKRPNIVLVLADDMGFSDLGCYGGEISTPNLDSLARRGARFTQFYNTARCS CCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCC PSRASLLTGLHPHQTGIGILTNNDLPRGYPGNLNLRCATLAEMLKAAGYATCLSGKWHLA CHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEECCCCHHH SEMHEPNDTWPTRRGFDRFFGTLTGCGSFYTPGTLTRGECDASAEALDPAFFYTDAIASH HHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHH AAEFVTEQSAAGNPFFLYAAFTAPHWPLHAHPGDIDRYRGRFDEGWDVLREKRMKRLVEE HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHH GILTASTAISARDPTQPAWSDTKEKAWQVKRMQAYAAQIERMDRGIGKIIEALKTGGTFE CCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NTAFIFLSDNGASPEDLPQFDAEKFMRRTDILPRATRDGLPMRVGNTPDICPGAEDTYSS CEEEEEEECCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHH YGRAWANLSNTPFRFYKRWVHEGGIATPLIVHWPAGGLDCGAILDQPAQLVDIAPTILEV HHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHH TGASYPLQAIGREIAPLEGCSLLPALKGEILFERPLYWEHTGNAAIRLGRWKLVREEPNG CCCCCCHHHHCCCCCCCCCCCCCHHHCCCEEEECCEEEEECCCCEEEEEEEEEEEECCCC WELYDLAADRTELNDVAPGNPEVVADLRAKWEAWAERIGVIPWEVTLGIYEERGLHPTWA CEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCC AG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]