| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150397245
Identifier: 150397245
GI number: 150397245
Start: 2096440
End: 2096901
Strand: Reverse
Name: 150397245
Synonym: Smed_2044
Alternate gene names: NA
Gene position: 2096901-2096440 (Counterclockwise)
Preceding gene: 150397246
Following gene: 150397239
Centisome position: 55.45
GC content: 59.52
Gene sequence:
>462_bases ATGAGCGAGAATCTTGCAATTCGCCCGGTGACGCGCCTCGACTACGAGCAATGGCTGCCCCTTTGGAGGGGTTACAACGC CTTCTACGGCCGCGCCGGCGAGACAGCGCTCCATCCCGACGTTACCCAAATGACCTGGTCCCGCTTCTTCGATGCCTACG AGCCGATGCATGCACTGGTCGCGGAAAGCGGCGACAGGCTCGTCGGCCTGACTCATTACATATTCCACCGCAGTACGACC TCTATCCAGCCAAATTGCTACCTGCAGGATCTCTTCACCGATGAGGTGGAGCGTGGCAGAGGCATCGGACGGGCTCTCAT CAACGGCGTCTACGAGGCCGCGAAACGCGCTGGGTCTCCCCGTGTCTATTGGCTGACCCACGAGACGAACCGTACGGCCA TGCAGCTCTACGATAGGGTGGCCGAGAAGTCGGGCTTCGTGATGTACCGAAAAATGTTCTGA
Upstream 100 bases:
>100_bases GGGGAGAAGGCGAAAGCATGTAGCCTGACAACGGGGCGATGACAGAACCACCCGACGAAGGTAGTTGTAGTGCACTCCGA TTTGCGAACAAGGATTGAGA
Downstream 100 bases:
>100_bases CCGCCGATGCGCTTTGGAAAACGACGGTACGGCGCGGCCGGCTTCGATGCGCTTTCCCGGGCGCGCACGCCGTCCTCGGC GTGGCTGTCCGGGCGGTCCC
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Protein; GNAT Family Acetyltransferase; Acetyltransferase GNAT Family; GCN5-Like N-Acetyltransferase; Histone Acetyltransferase; Gnat Acetyltransferase; Acetyltransferase Family Protein; Histone Acetyl Transferase Protein
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSENLAIRPVTRLDYEQWLPLWRGYNAFYGRAGETALHPDVTQMTWSRFFDAYEPMHALVAESGDRLVGLTHYIFHRSTT SIQPNCYLQDLFTDEVERGRGIGRALINGVYEAAKRAGSPRVYWLTHETNRTAMQLYDRVAEKSGFVMYRKMF
Sequences:
>Translated_153_residues MSENLAIRPVTRLDYEQWLPLWRGYNAFYGRAGETALHPDVTQMTWSRFFDAYEPMHALVAESGDRLVGLTHYIFHRSTT SIQPNCYLQDLFTDEVERGRGIGRALINGVYEAAKRAGSPRVYWLTHETNRTAMQLYDRVAEKSGFVMYRKMF >Mature_152_residues SENLAIRPVTRLDYEQWLPLWRGYNAFYGRAGETALHPDVTQMTWSRFFDAYEPMHALVAESGDRLVGLTHYIFHRSTTS IQPNCYLQDLFTDEVERGRGIGRALINGVYEAAKRAGSPRVYWLTHETNRTAMQLYDRVAEKSGFVMYRKMF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6325451, Length=151, Percent_Identity=34.4370860927152, Blast_Score=100, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6320768, Length=154, Percent_Identity=32.4675324675325, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17821; Mature: 17690
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENLAIRPVTRLDYEQWLPLWRGYNAFYGRAGETALHPDVTQMTWSRFFDAYEPMHALV CCCCCEECCHHHCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AESGDRLVGLTHYIFHRSTTSIQPNCYLQDLFTDEVERGRGIGRALINGVYEAAKRAGSP HCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC RVYWLTHETNRTAMQLYDRVAEKSGFVMYRKMF EEEEEEECCCHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure SENLAIRPVTRLDYEQWLPLWRGYNAFYGRAGETALHPDVTQMTWSRFFDAYEPMHALV CCCCEECCHHHCCHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AESGDRLVGLTHYIFHRSTTSIQPNCYLQDLFTDEVERGRGIGRALINGVYEAAKRAGSP HCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC RVYWLTHETNRTAMQLYDRVAEKSGFVMYRKMF EEEEEEECCCHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA