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The map label for this gene is 150397192

Identifier: 150397192

GI number: 150397192

Start: 2040655

End: 2041884

Strand: Reverse

Name: 150397192

Synonym: Smed_1990

Alternate gene names: NA

Gene position: 2041884-2040655 (Counterclockwise)

Preceding gene: 150397193

Following gene: 150397191

Centisome position: 53.99

GC content: 64.63

Gene sequence:

>1230_bases
TTGTCATCAGGCACTGAGCGAGACGGTGTGAGGCCGAAGAACGGCGCGGGCGTCGACGGCACCGCCGCGGACCTCCATGC
CTCTATCGTCTCCGCGCGGAAGGTACCCTTTTCCGCCGATCCGGTTGAGGGGAACCTGGAACGCTGCCTCGCCGCGCTTC
CTCCGCTCTGCCGCCGCGCGCGCATCACGCGGCTCGGCGATCTGACCGGCCTTGACCGGATCGGGCTGCCGGTGATGCAG
GCTGTCCGGCCTGCCGCGCTCTCCGAAGTTACGTCTCTCGGAAGGGGCTTCTCCAAAGCGGAGGCGGCAGTCGGCGCGCT
GATGGAATCGCTCGAACGCTATTTTGCCGAGTCCATTCCGGCAGATCGGACCTTTCTCGCGACCGCCGACCAACTCGAAG
TCACCAAGGGTCTCTTTGAGAACCTCGTGGTTCCGGAACGGCGTGGAAAATGGCGTCAACAGGTCATTGCCTGGATCGAA
GGGATCGATGTCCTGAGCGGCTTAGTGCAGCCGGTGCCGCTGGAACTCGTGCATACCCGTTACAGCGATCCGCCGCCGGC
CCATGACGGCGTCTTCCTGCGCACGACCACCGGCCTTGCCTGCCATACCAGCCCCAATGGCGCTTTCCTGCACGGATTAT
GGGAATGCCTCGAACGGGATGCGATCGCCCGTGCCTTTGCCACGCATGGCTTCTTCGATCGGATGCGGCTTGCGCCCTTT
GGCCTGGGGGACAGGATTGATCGTATTCGGTCGGTTGCGAGCGCTCGCGGCATCTCCTTCGCCCTGTGGCTCGCTCCCTC
TCCGGCATCCGTTCCCGTCGTCTGGTGTCAGACGATCGAGACTTCGCCGGGTGAGCCGATACTGGCGCTGCCGACGGAAG
GTTACGCCGCGGGCCCGAGCGTTGCAGCGGCGGCTGCAAGCGCAATGCTGGAAGCACTCTCGGCACGGGCAGGGGCGATC
TCTGGCGCCCGCGACGACCAGACGAGGGAGCACTATCGCAGGAGGACGGACGGGGCGATAGCGAAGGCCCGGGAGCTTAT
TCTTGGCGATCACGCTACAAGGTTCATGGAGACACCGACGCTGACGCTCACAAATTCCGGTGCGCTGGCAGGCCGCGTGA
TCGATGCAGGGCTCGGACCGGTGCTGGCCATTTCCGTGGGTGCCGAAGGCGGTGTACATTGCGTGCGAACCGTTCTTCCT
GGTGCCTCTCCCTTCTTCGTCTTGCGGTGA

Upstream 100 bases:

>100_bases
GTTGTTGCTGCGGACCTGCGCTGCGCTATCGAGATCGCTGAGAGCCAAGGGGCGACGGCGTTGCTCAGGCGGGCTCGAAA
ATCGACGCGGGAGCTCGGCA

Downstream 100 bases:

>100_bases
GTATGCGATGGCAGCCGATGGTCCGATTCTGGTGTTCCTTGGTCCGACCCTGCGGCTTGCCGAGGCGGAAAAAATCCTCG
ATGCCGTTTATCTGCAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSSGTERDGVRPKNGAGVDGTAADLHASIVSARKVPFSADPVEGNLERCLAALPPLCRRARITRLGDLTGLDRIGLPVMQ
AVRPAALSEVTSLGRGFSKAEAAVGALMESLERYFAESIPADRTFLATADQLEVTKGLFENLVVPERRGKWRQQVIAWIE
GIDVLSGLVQPVPLELVHTRYSDPPPAHDGVFLRTTTGLACHTSPNGAFLHGLWECLERDAIARAFATHGFFDRMRLAPF
GLGDRIDRIRSVASARGISFALWLAPSPASVPVVWCQTIETSPGEPILALPTEGYAAGPSVAAAAASAMLEALSARAGAI
SGARDDQTREHYRRRTDGAIAKARELILGDHATRFMETPTLTLTNSGALAGRVIDAGLGPVLAISVGAEGGVHCVRTVLP
GASPFFVLR

Sequences:

>Translated_409_residues
MSSGTERDGVRPKNGAGVDGTAADLHASIVSARKVPFSADPVEGNLERCLAALPPLCRRARITRLGDLTGLDRIGLPVMQ
AVRPAALSEVTSLGRGFSKAEAAVGALMESLERYFAESIPADRTFLATADQLEVTKGLFENLVVPERRGKWRQQVIAWIE
GIDVLSGLVQPVPLELVHTRYSDPPPAHDGVFLRTTTGLACHTSPNGAFLHGLWECLERDAIARAFATHGFFDRMRLAPF
GLGDRIDRIRSVASARGISFALWLAPSPASVPVVWCQTIETSPGEPILALPTEGYAAGPSVAAAAASAMLEALSARAGAI
SGARDDQTREHYRRRTDGAIAKARELILGDHATRFMETPTLTLTNSGALAGRVIDAGLGPVLAISVGAEGGVHCVRTVLP
GASPFFVLR
>Mature_408_residues
SSGTERDGVRPKNGAGVDGTAADLHASIVSARKVPFSADPVEGNLERCLAALPPLCRRARITRLGDLTGLDRIGLPVMQA
VRPAALSEVTSLGRGFSKAEAAVGALMESLERYFAESIPADRTFLATADQLEVTKGLFENLVVPERRGKWRQQVIAWIEG
IDVLSGLVQPVPLELVHTRYSDPPPAHDGVFLRTTTGLACHTSPNGAFLHGLWECLERDAIARAFATHGFFDRMRLAPFG
LGDRIDRIRSVASARGISFALWLAPSPASVPVVWCQTIETSPGEPILALPTEGYAAGPSVAAAAASAMLEALSARAGAIS
GARDDQTREHYRRRTDGAIAKARELILGDHATRFMETPTLTLTNSGALAGRVIDAGLGPVLAISVGAEGGVHCVRTVLPG
ASPFFVLR

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017667
- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 43375; Mature: 43244

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGTERDGVRPKNGAGVDGTAADLHASIVSARKVPFSADPVEGNLERCLAALPPLCRRA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHH
RITRLGDLTGLDRIGLPVMQAVRPAALSEVTSLGRGFSKAEAAVGALMESLERYFAESIP
HHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
ADRTFLATADQLEVTKGLFENLVVPERRGKWRQQVIAWIEGIDVLSGLVQPVPLELVHTR
CCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
YSDPPPAHDGVFLRTTTGLACHTSPNGAFLHGLWECLERDAIARAFATHGFFDRMRLAPF
CCCCCCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GLGDRIDRIRSVASARGISFALWLAPSPASVPVVWCQTIETSPGEPILALPTEGYAAGPS
CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCH
VAAAAASAMLEALSARAGAISGARDDQTREHYRRRTDGAIAKARELILGDHATRFMETPT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCE
LTLTNSGALAGRVIDAGLGPVLAISVGAEGGVHCVRTVLPGASPFFVLR
EEEECCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure 
SSGTERDGVRPKNGAGVDGTAADLHASIVSARKVPFSADPVEGNLERCLAALPPLCRRA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHH
RITRLGDLTGLDRIGLPVMQAVRPAALSEVTSLGRGFSKAEAAVGALMESLERYFAESIP
HHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
ADRTFLATADQLEVTKGLFENLVVPERRGKWRQQVIAWIEGIDVLSGLVQPVPLELVHTR
CCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC
YSDPPPAHDGVFLRTTTGLACHTSPNGAFLHGLWECLERDAIARAFATHGFFDRMRLAPF
CCCCCCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GLGDRIDRIRSVASARGISFALWLAPSPASVPVVWCQTIETSPGEPILALPTEGYAAGPS
CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCH
VAAAAASAMLEALSARAGAISGARDDQTREHYRRRTDGAIAKARELILGDHATRFMETPT
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCE
LTLTNSGALAGRVIDAGLGPVLAISVGAEGGVHCVRTVLPGASPFFVLR
EEEECCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]