| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397169
Identifier: 150397169
GI number: 150397169
Start: 2018225
End: 2019124
Strand: Reverse
Name: 150397169
Synonym: Smed_1967
Alternate gene names: NA
Gene position: 2019124-2018225 (Counterclockwise)
Preceding gene: 150397170
Following gene: 150397166
Centisome position: 53.39
GC content: 64.44
Gene sequence:
>900_bases ATGTCTGACACCGACATGCCCGTGATCGACGCGGTTCTCGCCAGGAGACTGATTGCAACACAGTTTCCACAGTGGGCGGA TCTGCCCGTAAGGCCGGTCGAGTTCGGCGGGTGGGATAACAGAACCTTTCGCCTCGGTAAGCACATGACCGTGCGACTAC CAAGCGCCGCTCACTACGCGCTCCAGGTGGAAAAGGAGCAAGAATGGCTGCCCCGGCTCGCGCCTTCCCTGCCGCTGCCT GTGCCCGTTCCGCTGGCGATGGGCAGGCCGGGCGAGGGATATCCCTGGCACTGGTCGGTCTATGAGTGGCGCCACGGCGA GATCGCCACGCGGGCGCAAATTGCCGATCTCAGCCGCTTCGCAACAACAATCGGCGAATTTCTGGCTGCGCTGCAACGGA TCGACGCCCAGGGCGGCCCGCCGCCCGGCCAGCACAACTTCTTCCGGGGCGGAGCATTGACCGTCTATGACCGCGAAACG CGCTGGGCGCTCGACGCGCTTGAAGGCAGGATCGACGTCCACGCCGCGCGCCTGGTGTGGGAGGCCGCACTTGCTTCTGC CTGGGACAGGGCTCCCGTCTGGTTCCATGGCGATGTCGCCGCCGGCAATCTTTTGGTTGAGAATGGCCGTTTGAGCGCCG TGATCGATTTCGGAACGTCGGGCGTGGGCGATCCGGCTTGTGATCTGTCGATCGCCTGGACGATGTTCGAGGAGACGAGT CGTACCGCATTCCGTGCCGCTCTCCGGCTCGACGAAGGGACCTGGGCGCGTGGCCGAGGATGGACGTTGTGGAAGGCGCT GATCGTCGCTGCCGAGATGCCGGGCACCGATCGACGGGAGGTTGAAAAGTCGCGGCGGATCATCGACGCCGTTCTGTCGG ATCACCGCCGCTACGCATAA
Upstream 100 bases:
>100_bases CGCTTGATCGATGCAGCAGTTGGTATGGGCCGGCGGGGTTGCCCACTCCGATGTTTTCGTTACAAGCTGGGTGCCTTCAC GATCAGAGTGCGGTATTTCC
Downstream 100 bases:
>100_bases AGGTTCCCGTTACAGCGCCGCAGCCTGTTCCCGGCGGCTTCAACCGGATACGCGGGCGGTGGACTGGCCGCACCATGACT GGGGCCGCCCGCTACGCTTT
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; GNAT Family Acetyltransferase; Acetyltransferase; Aminoglycoside 3-Phosphotransferase; Aminoglycoside Phosphotransferase Family Protein; Transferase; Acetyltransferase GNAT Family Protein; LOW QUALITY PROTEIN Phosphotransferase; Aminoglycoside Phosphotransferase-Like Protein; Phosphotransferase Family; Phosphotransferase Family Protein
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSDTDMPVIDAVLARRLIATQFPQWADLPVRPVEFGGWDNRTFRLGKHMTVRLPSAAHYALQVEKEQEWLPRLAPSLPLP VPVPLAMGRPGEGYPWHWSVYEWRHGEIATRAQIADLSRFATTIGEFLAALQRIDAQGGPPPGQHNFFRGGALTVYDRET RWALDALEGRIDVHAARLVWEAALASAWDRAPVWFHGDVAAGNLLVENGRLSAVIDFGTSGVGDPACDLSIAWTMFEETS RTAFRAALRLDEGTWARGRGWTLWKALIVAAEMPGTDRREVEKSRRIIDAVLSDHRRYA
Sequences:
>Translated_299_residues MSDTDMPVIDAVLARRLIATQFPQWADLPVRPVEFGGWDNRTFRLGKHMTVRLPSAAHYALQVEKEQEWLPRLAPSLPLP VPVPLAMGRPGEGYPWHWSVYEWRHGEIATRAQIADLSRFATTIGEFLAALQRIDAQGGPPPGQHNFFRGGALTVYDRET RWALDALEGRIDVHAARLVWEAALASAWDRAPVWFHGDVAAGNLLVENGRLSAVIDFGTSGVGDPACDLSIAWTMFEETS RTAFRAALRLDEGTWARGRGWTLWKALIVAAEMPGTDRREVEKSRRIIDAVLSDHRRYA >Mature_298_residues SDTDMPVIDAVLARRLIATQFPQWADLPVRPVEFGGWDNRTFRLGKHMTVRLPSAAHYALQVEKEQEWLPRLAPSLPLPV PVPLAMGRPGEGYPWHWSVYEWRHGEIATRAQIADLSRFATTIGEFLAALQRIDAQGGPPPGQHNFFRGGALTVYDRETR WALDALEGRIDVHAARLVWEAALASAWDRAPVWFHGDVAAGNLLVENGRLSAVIDFGTSGVGDPACDLSIAWTMFEETSR TAFRAALRLDEGTWARGRGWTLWKALIVAAEMPGTDRREVEKSRRIIDAVLSDHRRYA
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33467; Mature: 33336
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTDMPVIDAVLARRLIATQFPQWADLPVRPVEFGGWDNRTFRLGKHMTVRLPSAAHYA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEECCEEEEECCCCCEEE LQVEKEQEWLPRLAPSLPLPVPVPLAMGRPGEGYPWHWSVYEWRHGEIATRAQIADLSRF EEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHH ATTIGEFLAALQRIDAQGGPPPGQHNFFRGGALTVYDRETRWALDALEGRIDVHAARLVW HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHH EAALASAWDRAPVWFHGDVAAGNLLVENGRLSAVIDFGTSGVGDPACDLSIAWTMFEETS HHHHHHHCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHH RTAFRAALRLDEGTWARGRGWTLWKALIVAAEMPGTDRREVEKSRRIIDAVLSDHRRYA HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDTDMPVIDAVLARRLIATQFPQWADLPVRPVEFGGWDNRTFRLGKHMTVRLPSAAHYA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEECCEEEEECCCCCEEE LQVEKEQEWLPRLAPSLPLPVPVPLAMGRPGEGYPWHWSVYEWRHGEIATRAQIADLSRF EEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHH ATTIGEFLAALQRIDAQGGPPPGQHNFFRGGALTVYDRETRWALDALEGRIDVHAARLVW HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHH EAALASAWDRAPVWFHGDVAAGNLLVENGRLSAVIDFGTSGVGDPACDLSIAWTMFEETS HHHHHHHCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHH RTAFRAALRLDEGTWARGRGWTLWKALIVAAEMPGTDRREVEKSRRIIDAVLSDHRRYA HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA