| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397166
Identifier: 150397166
GI number: 150397166
Start: 2015580
End: 2016170
Strand: Reverse
Name: 150397166
Synonym: Smed_1964
Alternate gene names: NA
Gene position: 2016170-2015580 (Counterclockwise)
Preceding gene: 150397169
Following gene: 150397165
Centisome position: 53.31
GC content: 60.07
Gene sequence:
>591_bases GTGCCCGTCGTTGGAGAACGCCTCGTGAAACGCTTCATTGCGCAGACAGTCTTTTTGTTGCTTATTGGAGCCCCGGGGGC TGCAGATGCCGGTACAACCATGAGGACTTCCGGCAAGGCTTTCGCACCGCCCGCCTTCGCATCTTTCTGCGTCCGCGAGC CACGCCTCTGCAGCACAGGCGGCGGCGAAAAGGCGGTCGTTCTTGCTCCGGATAAAATCAGCCAGCTCAAACAGATCAAC AGCGCCGTCAATGCGAGCATCCGCGAACGCAGCGACCGCGCAAACGTCGGCAAGGACGATGACTGGCGCGTGCCGACCGC TTACGGAGACTGCGAGGACTTCGCAATCCTCAAGAAGCGAGAGCTGTTGAAGCGCGGCTGGCCCGCATCGGCACTGCTAC TCACGGTTGCGCTCTTTCGTGGGGAGGGCCACACGGTTCTCACCGTCCGCACGAGCGAAGGTGACCTGGTTCTCGACAAC AGGACCAATTCGGTCAGAGATTGGTCACGCACCCCTTATAATTATTTCGCCCGGCAATCCCAGTCGAACGGCAGGCGGTG GGAACTGATCGCAGGTGCCCGAAATATCTGA
Upstream 100 bases:
>100_bases TTACGAAATATTAGTAGATCGCCATATCGCGGCCTCATTTCGGGTTATCAACCATGGCTTAATCTATCTTAGCTAGTCTC TACGTCGGATCGGGGGACTT
Downstream 100 bases:
>100_bases TTGCGAGCGCAAGGGGTCCTTTCCGGACCGGAAAACGTTACTTTCTCCAACCCGATGATTTCAGATCGGGTGGGCCGGTC TAAAATTCATCGGATTCGAC
Product: transglutaminase family protein cysteine peptidase BTLCP
Products: NA
Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Cysteine Peptidase; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPVVGERLVKRFIAQTVFLLLIGAPGAADAGTTMRTSGKAFAPPAFASFCVREPRLCSTGGGEKAVVLAPDKISQLKQIN SAVNASIRERSDRANVGKDDDWRVPTAYGDCEDFAILKKRELLKRGWPASALLLTVALFRGEGHTVLTVRTSEGDLVLDN RTNSVRDWSRTPYNYFARQSQSNGRRWELIAGARNI
Sequences:
>Translated_196_residues MPVVGERLVKRFIAQTVFLLLIGAPGAADAGTTMRTSGKAFAPPAFASFCVREPRLCSTGGGEKAVVLAPDKISQLKQIN SAVNASIRERSDRANVGKDDDWRVPTAYGDCEDFAILKKRELLKRGWPASALLLTVALFRGEGHTVLTVRTSEGDLVLDN RTNSVRDWSRTPYNYFARQSQSNGRRWELIAGARNI >Mature_195_residues PVVGERLVKRFIAQTVFLLLIGAPGAADAGTTMRTSGKAFAPPAFASFCVREPRLCSTGGGEKAVVLAPDKISQLKQINS AVNASIRERSDRANVGKDDDWRVPTAYGDCEDFAILKKRELLKRGWPASALLLTVALFRGEGHTVLTVRTSEGDLVLDNR TNSVRDWSRTPYNYFARQSQSNGRRWELIAGARNI
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21523; Mature: 21392
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVGERLVKRFIAQTVFLLLIGAPGAADAGTTMRTSGKAFAPPAFASFCVREPRLCSTG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCC GGEKAVVLAPDKISQLKQINSAVNASIRERSDRANVGKDDDWRVPTAYGDCEDFAILKKR CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH ELLKRGWPASALLLTVALFRGEGHTVLTVRTSEGDLVLDNRTNSVRDWSRTPYNYFARQS HHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHC QSNGRRWELIAGARNI CCCCCEEEEECCCCCC >Mature Secondary Structure PVVGERLVKRFIAQTVFLLLIGAPGAADAGTTMRTSGKAFAPPAFASFCVREPRLCSTG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCCCC GGEKAVVLAPDKISQLKQINSAVNASIRERSDRANVGKDDDWRVPTAYGDCEDFAILKKR CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH ELLKRGWPASALLLTVALFRGEGHTVLTVRTSEGDLVLDNRTNSVRDWSRTPYNYFARQS HHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHC QSNGRRWELIAGARNI CCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA