Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397086

Identifier: 150397086

GI number: 150397086

Start: 1954071

End: 1954556

Strand: Reverse

Name: 150397086

Synonym: Smed_1884

Alternate gene names: NA

Gene position: 1954556-1954071 (Counterclockwise)

Preceding gene: 150397087

Following gene: 150397085

Centisome position: 51.68

GC content: 57.61

Gene sequence:

>486_bases
ATGGCAAACAAGGCAACGAAGAAGGGCAGCAAGGTTTATGTCTGCGCCACTGCCCAGAATACCGATCTAATCGAGTCCGC
CTATGCAGCGCTAACCTGGGTGCAGGTTGGCAAGGTCGGCAATATCGGTGATTTCGGCGCCGAGTCGACGATGAACAGCT
ACAACACGCTCGATGAGCCGGTTACCCAGAAACAGAAGGGCACCGCGAATGCCGGTGATCCACAGATCGAGGTCGCCTCA
GTGCATGACGATGCAGGCCAGGTCATCCTGCGAACCTTCGGCAATCCTCTGAACCTCGACAACATGGCAATAAAGGTCGA
GCGCAACGATGGCGGCGAGGGGTTCACGAACACGATCTTCTATAGCCGTGGCGTCGTGTCTGGCCCGCTTTATCCGGGTG
GCGGCTCCGACGACTTCGAGCTCGAGCGCTTCACGATCGGCCTCAACCAACTGCCGATCCGCGTTAATCCCACTGCAATC
CCGTAA

Upstream 100 bases:

>100_bases
ATCAGCAGCGAGCCATGGGCGGCAGGCCCGCTCCAAGAGGGTGAACGGGTGCAGATCCCCGTCACCATTCCATACATCGC
CTTCGAACCGGAGAACTGAC

Downstream 100 bases:

>100_bases
TCGATAGGTGACCCTTGGACATTTCCAAACTCGTCAATTCTGAAGACCTTTTCGAGCTCAACCTCGCGGGACCGGATACC
GATGAACTCGTGGGTATTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEPVTQKQKGTANAGDPQIEVAS
VHDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIFYSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAI
P

Sequences:

>Translated_161_residues
MANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEPVTQKQKGTANAGDPQIEVAS
VHDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIFYSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAI
P
>Mature_160_residues
ANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEPVTQKQKGTANAGDPQIEVASV
HDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIFYSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17156; Mature: 17025

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEP
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCC
VTQKQKGTANAGDPQIEVASVHDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIF
HHHHHCCCCCCCCCEEEEEEECCCCHHEEHECCCCCCCCCCEEEEEECCCCCCCCCEEEE
YSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAIP
EECCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCC
>Mature Secondary Structure 
ANKATKKGSKVYVCATAQNTDLIESAYAALTWVQVGKVGNIGDFGAESTMNSYNTLDEP
CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCC
VTQKQKGTANAGDPQIEVASVHDDAGQVILRTFGNPLNLDNMAIKVERNDGGEGFTNTIF
HHHHHCCCCCCCCCEEEEEEECCCCHHEEHECCCCCCCCCCEEEEEECCCCCCCCCEEEE
YSRGVVSGPLYPGGGSDDFELERFTIGLNQLPIRVNPTAIP
EECCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA