Click here to switch to the map view.

The map label for this gene is dppC [H]

Identifier: 150396956

GI number: 150396956

Start: 1834048

End: 1834890

Strand: Reverse

Name: dppC [H]

Synonym: Smed_1753

Alternate gene names: 150396956

Gene position: 1834890-1834048 (Counterclockwise)

Preceding gene: 150396957

Following gene: 150396955

Centisome position: 48.52

GC content: 62.16

Gene sequence:

>843_bases
GTGTTGGCGCGTCTCCTGCGGAGGCCGCTCGCGATCATCGGCTTTGCAATCATCGTCGTGGTGGTAAGCGCAGCAGCGCT
TGCGCCATGGATAGTGCCATATGACCCGCACGAGCAGTTCTTCGAGGGCCTGACCATCGAAGGCGCGCCGCTGCCGCCCA
ATAGCCAATTCTGGCTGGGTACCGATCTTGTCGGACGCGATCTGCTGAGCCGCCTGATATACGGTGCGCGTACCTCGCTC
ATCATCGGCGTGGTCGCCAATGGCATTGCCGTTCTCATCGGCTCGCTCGTCGGCATTGCAGCCGGCTATTTTCGGGGCTG
GGTGGACACCGTGCTGATGCGCTTCACCGATCTGATGATGGCTTTCCCGGCGCTTCTCCTCGCCATCGTTCTGGCCGCCA
TCTTCACCCCCAGCCTGTGGATCGTGGCGATGGTCATCGCCATGGTGAACTGGGTGCAGATCGCCCGCGTCGTCTATACG
GAAACCCGCTCGATTGCCGAGCGCGATTTCGTCACGGCGGAGCGCGCTCTGGGGGCCGGTGCCGGGCGAATTCTCTTCCG
TCACATCCTGCCGCATCTCCTGTCCACTATCATCGTCTGGGCGACGCTCGGTATCGCGACGACAGTACTTCTGGAGGCGA
CGCTTTCTTTCCTCGGCATCGGCGTGCAGCCGCCCATTCCCTCCTGGGGCAACATCATCTTCGAAAACCAGACCTATTTC
ACCTCGGCACCCTGGCTGGTGTTCATACCGGGTGCCGCGATCCTCGCGCTTGCGCTCGCCTTCAATCTGGTCGGTGATGC
GCTGCGCGATGTTCTCGATCCGACGCAGCAGGGGAGGCATTGA

Upstream 100 bases:

>100_bases
GTCGCTGCAGCCATCGTTGAGGAATTCGCTAACCACGGATTGAAGAATGCCGACAATGGTCGCTGAAACGGCGCGCAGTA
AAGATAATAGGACACCGGGC

Downstream 100 bases:

>100_bases
TGATGGCCTATATTGCGCGGCGACTGCTTCAGACGGTCGTCATCCTGCTCGGCATCAGCTTTGTCACCTTCATTCTGCTG
TACCTGATCCCGGCCGATCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLARLLRRPLAIIGFAIIVVVVSAAALAPWIVPYDPHEQFFEGLTIEGAPLPPNSQFWLGTDLVGRDLLSRLIYGARTSL
IIGVVANGIAVLIGSLVGIAAGYFRGWVDTVLMRFTDLMMAFPALLLAIVLAAIFTPSLWIVAMVIAMVNWVQIARVVYT
ETRSIAERDFVTAERALGAGAGRILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSWGNIIFENQTYF
TSAPWLVFIPGAAILALALAFNLVGDALRDVLDPTQQGRH

Sequences:

>Translated_280_residues
MLARLLRRPLAIIGFAIIVVVVSAAALAPWIVPYDPHEQFFEGLTIEGAPLPPNSQFWLGTDLVGRDLLSRLIYGARTSL
IIGVVANGIAVLIGSLVGIAAGYFRGWVDTVLMRFTDLMMAFPALLLAIVLAAIFTPSLWIVAMVIAMVNWVQIARVVYT
ETRSIAERDFVTAERALGAGAGRILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSWGNIIFENQTYF
TSAPWLVFIPGAAILALALAFNLVGDALRDVLDPTQQGRH
>Mature_280_residues
MLARLLRRPLAIIGFAIIVVVVSAAALAPWIVPYDPHEQFFEGLTIEGAPLPPNSQFWLGTDLVGRDLLSRLIYGARTSL
IIGVVANGIAVLIGSLVGIAAGYFRGWVDTVLMRFTDLMMAFPALLLAIVLAAIFTPSLWIVAMVIAMVNWVQIARVVYT
ETRSIAERDFVTAERALGAGAGRILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSWGNIIFENQTYF
TSAPWLVFIPGAAILALALAFNLVGDALRDVLDPTQQGRH

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=275, Percent_Identity=38.5454545454545, Blast_Score=196, Evalue=1e-51,
Organism=Escherichia coli, GI1787760, Length=272, Percent_Identity=36.0294117647059, Blast_Score=178, Evalue=4e-46,
Organism=Escherichia coli, GI1789964, Length=257, Percent_Identity=45.5252918287938, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1789889, Length=253, Percent_Identity=36.7588932806324, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1787498, Length=274, Percent_Identity=33.2116788321168, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1788505, Length=230, Percent_Identity=30.8695652173913, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1787549, Length=246, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30333; Mature: 30333

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLARLLRRPLAIIGFAIIVVVVSAAALAPWIVPYDPHEQFFEGLTIEGAPLPPNSQFWLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEC
TDLVGRDLLSRLIYGARTSLIIGVVANGIAVLIGSLVGIAAGYFRGWVDTVLMRFTDLMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFPALLLAIVLAAIFTPSLWIVAMVIAMVNWVQIARVVYTETRSIAERDFVTAERALGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AGRILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSWGNIIFENQTYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEE
TSAPWLVFIPGAAILALALAFNLVGDALRDVLDPTQQGRH
ECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHCCCC
>Mature Secondary Structure
MLARLLRRPLAIIGFAIIVVVVSAAALAPWIVPYDPHEQFFEGLTIEGAPLPPNSQFWLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEC
TDLVGRDLLSRLIYGARTSLIIGVVANGIAVLIGSLVGIAAGYFRGWVDTVLMRFTDLMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFPALLLAIVLAAIFTPSLWIVAMVIAMVNWVQIARVVYTETRSIAERDFVTAERALGAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AGRILFRHILPHLLSTIIVWATLGIATTVLLEATLSFLGIGVQPPIPSWGNIIFENQTYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEE
TSAPWLVFIPGAAILALALAFNLVGDALRDVLDPTQQGRH
ECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]