| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is acpXL
Identifier: 150396944
GI number: 150396944
Start: 1821248
End: 1821535
Strand: Reverse
Name: acpXL
Synonym: Smed_1741
Alternate gene names: 150396944
Gene position: 1821535-1821248 (Counterclockwise)
Preceding gene: 150396946
Following gene: 150396943
Centisome position: 48.16
GC content: 52.08
Gene sequence:
>288_bases ATGCGCGTGACAGCTACATTCGACAAGGTTGCCGATATTATCGCGGAAACGAGCGAGATCGATCGCGAGACGATCAAGCC GGAAAGCCACACGATTGATGATCTCGGCATCGACAGTCTCGACTTTCTCGACATCGTTTTTGCGATCGACAAGGAATTCG GTATCAAGATTCCGCTTGAGCAGTGGACGCAGGAAGTCAATGAAGGCAAGGTCTCGACCGAGGAATACTTCGTATTGAAG AACCTCTGTGCCAAGATCGACGAGCTTCGGGCCGCCAAAGCGGGTTGA
Upstream 100 bases:
>100_bases AGCAACACCTTTTTCAAATGCGGTGGCAAAAAGCCGTGGGGCATTGGCTTTTGCGGTGCATTTTTCTATAGGGTTCGCCA AGACTTGAATTTTAAGAGGT
Downstream 100 bases:
>100_bases GCAAACGGGTGAAGCGGTTTTTCCGCGCGCACTCGACTCTCCTAGAACCGGCCGCGTTGCGATTCTGGCGACAGCCAGGA TCACCGTGATCGGAGCCTGA
Product: acyl carrier protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MRVTATFDKVADIIAETSEIDRETIKPESHTIDDLGIDSLDFLDIVFAIDKEFGIKIPLEQWTQEVNEGKVSTEEYFVLK NLCAKIDELRAAKAG
Sequences:
>Translated_95_residues MRVTATFDKVADIIAETSEIDRETIKPESHTIDDLGIDSLDFLDIVFAIDKEFGIKIPLEQWTQEVNEGKVSTEEYFVLK NLCAKIDELRAAKAG >Mature_95_residues MRVTATFDKVADIIAETSEIDRETIKPESHTIDDLGIDSLDFLDIVFAIDKEFGIKIPLEQWTQEVNEGKVSTEEYFVLK NLCAKIDELRAAKAG
Specific function: Carrier of the growing fatty acid chain in fatty acid biosynthesis. Is involved in the transfer of long hydroxylated fatty acids to lipid A
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACPXL_RHIME (Q92P51)
Other databases:
- EMBL: AL591688 - RefSeq: NP_386048.3 - ProteinModelPortal: Q92P51 - SMR: Q92P51 - GeneID: 1233607 - GenomeReviews: AL591688_GR - KEGG: sme:SMc04278 - NMPDR: fig|266834.1.peg.3236 - HOGENOM: HBG755218 - OMA: EQYFVLS - ProtClustDB: PRK06508 - BioCyc: SMEL266834:SMC04278-MONOMER - GO: GO:0005737 - InterPro: IPR009081 - InterPro: IPR006163 - InterPro: IPR006162 - Gene3D: G3DSA:1.10.1200.10
Pfam domain/function: PF00550 PP-binding; SSF47336 ACP_like
EC number: NA
Molecular weight: Translated: 10703; Mature: 10703
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS50075 ACP_DOMAIN; PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTATFDKVADIIAETSEIDRETIKPESHTIDDLGIDSLDFLDIVFAIDKEFGIKIPLE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH QWTQEVNEGKVSTEEYFVLKNLCAKIDELRAAKAG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVTATFDKVADIIAETSEIDRETIKPESHTIDDLGIDSLDFLDIVFAIDKEFGIKIPLE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH QWTQEVNEGKVSTEEYFVLKNLCAKIDELRAAKAG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430