| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150396767
Identifier: 150396767
GI number: 150396767
Start: 1649680
End: 1650513
Strand: Reverse
Name: 150396767
Synonym: Smed_1557
Alternate gene names: NA
Gene position: 1650513-1649680 (Counterclockwise)
Preceding gene: 150396772
Following gene: 150396766
Centisome position: 43.64
GC content: 59.95
Gene sequence:
>834_bases ATGGCGACGGTATCGGCACCCCAACAGAATTCCGTTCGGAAACTGCGGACGCTCTTCATTTCCGATGTTCATCTGGGCTC GAAGGCGGCCAAGACGGATTTCCTGATCGATTTTCTGCGCCACCACGAGGCGGACACGATCATCCTCGTCGGCGACATCG TCGACGGCTGGCGCCTGAAGCGCAGCTGGTATTGGCCGCAATCCTGCAACGACGTGGTCCAGAAGCTTCTGCGTAAGGCA CGGAAGGGTACGCGGATTGTCTATATCCCGGGAAACCATGACGAGTTCCTCCGCGACTTTCCGGGCATTCATTTCGGCGG TATCGAAGTGGCGCAGCGTTACCTCCACCGGGGCGCGGACGGCCGGACCTATCTCGTGCTGCACGGCGATGAGTTCGATG TCGTCGTGCGCAATGCACGTGTCCTCGCCTATCTGGGTGACTGGGCCTATGACATGGCGATCGCCATCAATATCGGCCTT GCCGCCGTACGTCGTCGTCTCGACATGCCTTACTGGTCTTTCTCCTCCTGGGCGAAGCTGCAAGTCAAACATGCGGTAAA CTTCATCGGAGAGTTCCAGAGAGTCGTGGCTGAGGAGGCCCGTCGCCACGACGCCCAAGGCGTCATCTGCGGCCACATCC ATCATGCAATCATCGAAGACATCGGCGACATCAGGTACATCAACACCGGGGATTGGGTGGAGAGCTGCACGGCGATCGCC GAGCATCATGACGGCACCATGGAGCTTATCACGTGGCACCAGACGCGTGGAGACACTACCGCGGACCAGCGAGCCTCCGA GGCCGTTACGCGGCTCGCACCGCAAGCCGCATAA
Upstream 100 bases:
>100_bases CCCAGCCCTTGCTGCGTGCTGCCGATACCCTGTGTCATCTTCCTGAAACACGAGTCTGATTTTGACGGTTCTGAAACGGC TAAACCAGGATGAGGCTGGC
Downstream 100 bases:
>100_bases CCGGTTCTCCAAGACGAAACGTCGTACGTCATAGGGCCTCAATCGTCCCAGTGGACAAGCGCCTGTAGTGATAAGTAGCC GATGGCGAACGCACGCTCAG
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Calcineurin-Like Phosphoesterase; UDP-2 3-Diacylglucosamine Hydrolase; Metallo-Phosphoesterase; Metallo-Phosphoesterase Protein; Phosphoesterase; Metallophosphoesterase Family Protein; Calcineurin Phosphohydrolase Superfamily Protein; Calcineurin-Like Phosphoesterase Family; Metallo-Dependent Phosphoesterase; Metallophosphoesterase Protein
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MATVSAPQQNSVRKLRTLFISDVHLGSKAAKTDFLIDFLRHHEADTIILVGDIVDGWRLKRSWYWPQSCNDVVQKLLRKA RKGTRIVYIPGNHDEFLRDFPGIHFGGIEVAQRYLHRGADGRTYLVLHGDEFDVVVRNARVLAYLGDWAYDMAIAINIGL AAVRRRLDMPYWSFSSWAKLQVKHAVNFIGEFQRVVAEEARRHDAQGVICGHIHHAIIEDIGDIRYINTGDWVESCTAIA EHHDGTMELITWHQTRGDTTADQRASEAVTRLAPQAA
Sequences:
>Translated_277_residues MATVSAPQQNSVRKLRTLFISDVHLGSKAAKTDFLIDFLRHHEADTIILVGDIVDGWRLKRSWYWPQSCNDVVQKLLRKA RKGTRIVYIPGNHDEFLRDFPGIHFGGIEVAQRYLHRGADGRTYLVLHGDEFDVVVRNARVLAYLGDWAYDMAIAINIGL AAVRRRLDMPYWSFSSWAKLQVKHAVNFIGEFQRVVAEEARRHDAQGVICGHIHHAIIEDIGDIRYINTGDWVESCTAIA EHHDGTMELITWHQTRGDTTADQRASEAVTRLAPQAA >Mature_276_residues ATVSAPQQNSVRKLRTLFISDVHLGSKAAKTDFLIDFLRHHEADTIILVGDIVDGWRLKRSWYWPQSCNDVVQKLLRKAR KGTRIVYIPGNHDEFLRDFPGIHFGGIEVAQRYLHRGADGRTYLVLHGDEFDVVVRNARVLAYLGDWAYDMAIAINIGLA AVRRRLDMPYWSFSSWAKLQVKHAVNFIGEFQRVVAEEARRHDAQGVICGHIHHAIIEDIGDIRYINTGDWVESCTAIAE HHDGTMELITWHQTRGDTTADQRASEAVTRLAPQAA
Specific function: Unknown
COG id: COG2908
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31460; Mature: 31329
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVSAPQQNSVRKLRTLFISDVHLGSKAAKTDFLIDFLRHHEADTIILVGDIVDGWRLK CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEE RSWYWPQSCNDVVQKLLRKARKGTRIVYIPGNHDEFLRDFPGIHFGGIEVAQRYLHRGAD CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCC GRTYLVLHGDEFDVVVRNARVLAYLGDWAYDMAIAINIGLAAVRRRLDMPYWSFSSWAKL CCEEEEEECCCEEEEEECCEEEEEECCHHHHHHHEEHHHHHHHHHHHCCCCCCCCCHHHH QVKHAVNFIGEFQRVVAEEARRHDAQGVICGHIHHAIIEDIGDIRYINTGDWVESCTAIA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH EHHDGTMELITWHQTRGDTTADQRASEAVTRLAPQAA HCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure ATVSAPQQNSVRKLRTLFISDVHLGSKAAKTDFLIDFLRHHEADTIILVGDIVDGWRLK CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEE RSWYWPQSCNDVVQKLLRKARKGTRIVYIPGNHDEFLRDFPGIHFGGIEVAQRYLHRGAD CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCC GRTYLVLHGDEFDVVVRNARVLAYLGDWAYDMAIAINIGLAAVRRRLDMPYWSFSSWAKL CCEEEEEECCCEEEEEECCEEEEEECCHHHHHHHEEHHHHHHHHHHHCCCCCCCCCHHHH QVKHAVNFIGEFQRVVAEEARRHDAQGVICGHIHHAIIEDIGDIRYINTGDWVESCTAIA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH EHHDGTMELITWHQTRGDTTADQRASEAVTRLAPQAA HCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA