| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is bcr [H]
Identifier: 150396722
GI number: 150396722
Start: 1591199
End: 1592512
Strand: Direct
Name: bcr [H]
Synonym: Smed_1510
Alternate gene names: 150396722
Gene position: 1591199-1592512 (Clockwise)
Preceding gene: 150396721
Following gene: 150396731
Centisome position: 42.07
GC content: 60.43
Gene sequence:
>1314_bases ATGTCTTCCGTTTCCCAGCAATCTTCACTCGGTGAGCAGTCATCCGGGCACAGCAATCAGGTCTCGGGTGCCGCGCGCCT CGGAATGGGCCTCGTCGAATTCATCGTCACCATAGCGGTCATGACCGCAAGCATCGCGCTGGCGATCGACAGCATGCTGC CGGCTTTGCCGGCCATCGGCCGGACGCTCAACGTTGCCAATGCCAACGACACGCAACTCGTGATCGGCGTCTTCTTTCTT GGATTCGGTCTCTCCCAGATCTTTTTCGGAAGCCTCTCCGATACATTAGGTCGCCGGTCGGTGCTGCTTGCGGGCCTTGC CCTCTTCAGCCTGTCGATGTTCGCCGCCTCCTGGGTCGAAAGCATCGAAGCGCTGCTGTTGCTCCGCTTCGTTCAGGGTA TCGGCGGTGCCGCCGTGCGCATTACGACCATGGCGATCGTCCGCGACTGTTTCGGGGGCCGTGAGATGGCGCGCGTCATG TCCTATGTCATGATCGTCTTCATGATCGTGCCGATCGTCGCCCCGACGCTTGGCCAGCTGGTGATCGCCTATGCCGATTG GCACTGGATCTTCATCCTGATCGGCGTCGTCGGCGCGGCCCTTTTCGTTTGGGCACTTACCCGAATGAAAGAGTCGCTGC CGAGGGAGGAGCGCCTGCCGCTTTCAGTCGGCGCGGTTTTGTCCGGTTTTCGTACGGTCCTTACAAACCGCATCACCTGT GGCTACATGATCGGTATGACTCTGTTCACGGCCGTCATTTGCGCCTATGTCGTCAGCGTCCAGCAGGTCTTCGGTGAAGT CTACAATCTCAGCGACTGGCTGCCGATCGCCTTTGCGGGCACCGCGGGCGGCATTGCGGTCGCGAACTTCGCCAATGGCT ATTTCGTGCGCAGTTTCGGAATGCGGCGCATCTCGCACACAGCCATGATCCTCTTCACCGTCGTCGCGGCAATCGGATAC GTTCTTTCGCTCGCGGGCACTCCGGCTTTCACCATCAGCTACCTGCTGTTTTCTCTTTTGCTGATGTTCTTTGCCGTCAT CGCCACCAACTTCACCGCCATAAGCCTCGAACCCATGGGGCATCTCGCGGGAACAGCAACCGCGATCACCGGTTTCGTCT CGACCACCGGCGGTGCGCTGATCGGCGGCGCCGTCGGCCAGCTCTTCAACGGCACGCTGCAGCCACTCTTCGGCGGCTAC GCTCTTTTCGGAGTGCTGACCATCCTCGCAACGCTCTGGGCCGAAAACGGGAAGCTGTTCACCCATCCGGGCGATAGCGA TACGACGCACGAACACGGCGGCGGCCATTTGTGA
Upstream 100 bases:
>100_bases CTGTGTGCTGATCGCAGAGGGCGGAAAGCTATTCAAACCGCACAATCCGGCGGGTTAGCCGGATTCCCCAGTTTTCCCCA TCCATTTCGGAATTTCAGAC
Downstream 100 bases:
>100_bases CGAAAGAACCCGCCCGGCAATCGGGGCGGGTTCCATCTCGCCGGCGATGTCTTCCGATCAGACGGTGAAGACCTCTCGCC GCAATTCCTGCCAGCTCTCC
Product: major facilitator transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MSSVSQQSSLGEQSSGHSNQVSGAARLGMGLVEFIVTIAVMTASIALAIDSMLPALPAIGRTLNVANANDTQLVIGVFFL GFGLSQIFFGSLSDTLGRRSVLLAGLALFSLSMFAASWVESIEALLLLRFVQGIGGAAVRITTMAIVRDCFGGREMARVM SYVMIVFMIVPIVAPTLGQLVIAYADWHWIFILIGVVGAALFVWALTRMKESLPREERLPLSVGAVLSGFRTVLTNRITC GYMIGMTLFTAVICAYVVSVQQVFGEVYNLSDWLPIAFAGTAGGIAVANFANGYFVRSFGMRRISHTAMILFTVVAAIGY VLSLAGTPAFTISYLLFSLLLMFFAVIATNFTAISLEPMGHLAGTATAITGFVSTTGGALIGGAVGQLFNGTLQPLFGGY ALFGVLTILATLWAENGKLFTHPGDSDTTHEHGGGHL
Sequences:
>Translated_437_residues MSSVSQQSSLGEQSSGHSNQVSGAARLGMGLVEFIVTIAVMTASIALAIDSMLPALPAIGRTLNVANANDTQLVIGVFFL GFGLSQIFFGSLSDTLGRRSVLLAGLALFSLSMFAASWVESIEALLLLRFVQGIGGAAVRITTMAIVRDCFGGREMARVM SYVMIVFMIVPIVAPTLGQLVIAYADWHWIFILIGVVGAALFVWALTRMKESLPREERLPLSVGAVLSGFRTVLTNRITC GYMIGMTLFTAVICAYVVSVQQVFGEVYNLSDWLPIAFAGTAGGIAVANFANGYFVRSFGMRRISHTAMILFTVVAAIGY VLSLAGTPAFTISYLLFSLLLMFFAVIATNFTAISLEPMGHLAGTATAITGFVSTTGGALIGGAVGQLFNGTLQPLFGGY ALFGVLTILATLWAENGKLFTHPGDSDTTHEHGGGHL >Mature_436_residues SSVSQQSSLGEQSSGHSNQVSGAARLGMGLVEFIVTIAVMTASIALAIDSMLPALPAIGRTLNVANANDTQLVIGVFFLG FGLSQIFFGSLSDTLGRRSVLLAGLALFSLSMFAASWVESIEALLLLRFVQGIGGAAVRITTMAIVRDCFGGREMARVMS YVMIVFMIVPIVAPTLGQLVIAYADWHWIFILIGVVGAALFVWALTRMKESLPREERLPLSVGAVLSGFRTVLTNRITCG YMIGMTLFTAVICAYVVSVQQVFGEVYNLSDWLPIAFAGTAGGIAVANFANGYFVRSFGMRRISHTAMILFTVVAAIGYV LSLAGTPAFTISYLLFSLLLMFFAVIATNFTAISLEPMGHLAGTATAITGFVSTTGGALIGGAVGQLFNGTLQPLFGGYA LFGVLTILATLWAENGKLFTHPGDSDTTHEHGGGHL
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=390, Percent_Identity=26.4102564102564, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1790146, Length=334, Percent_Identity=26.3473053892216, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI48994889, Length=159, Percent_Identity=34.5911949685535, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790794, Length=192, Percent_Identity=28.6458333333333, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790195, Length=181, Percent_Identity=29.2817679558011, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI87082312, Length=186, Percent_Identity=25.8064516129032, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787065, Length=293, Percent_Identity=24.9146757679181, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI87081738, Length=207, Percent_Identity=27.536231884058, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46202; Mature: 46071
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVSQQSSLGEQSSGHSNQVSGAARLGMGLVEFIVTIAVMTASIALAIDSMLPALPAIG CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RTLNVANANDTQLVIGVFFLGFGLSQIFFGSLSDTLGRRSVLLAGLALFSLSMFAASWVE CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIEALLLLRFVQGIGGAAVRITTMAIVRDCFGGREMARVMSYVMIVFMIVPIVAPTLGQL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAYADWHWIFILIGVVGAALFVWALTRMKESLPREERLPLSVGAVLSGFRTVLTNRITC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCHH GYMIGMTLFTAVICAYVVSVQQVFGEVYNLSDWLPIAFAGTAGGIAVANFANGYFVRSFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEHHHHCCCHHHHHHH MRRISHTAMILFTVVAAIGYVLSLAGTPAFTISYLLFSLLLMFFAVIATNFTAISLEPMG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH HLAGTATAITGFVSTTGGALIGGAVGQLFNGTLQPLFGGYALFGVLTILATLWAENGKLF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE THPGDSDTTHEHGGGHL ECCCCCCCCCCCCCCCC >Mature Secondary Structure SSVSQQSSLGEQSSGHSNQVSGAARLGMGLVEFIVTIAVMTASIALAIDSMLPALPAIG CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RTLNVANANDTQLVIGVFFLGFGLSQIFFGSLSDTLGRRSVLLAGLALFSLSMFAASWVE CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIEALLLLRFVQGIGGAAVRITTMAIVRDCFGGREMARVMSYVMIVFMIVPIVAPTLGQL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAYADWHWIFILIGVVGAALFVWALTRMKESLPREERLPLSVGAVLSGFRTVLTNRITC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCHH GYMIGMTLFTAVICAYVVSVQQVFGEVYNLSDWLPIAFAGTAGGIAVANFANGYFVRSFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEHHHHCCCHHHHHHH MRRISHTAMILFTVVAAIGYVLSLAGTPAFTISYLLFSLLLMFFAVIATNFTAISLEPMG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCH HLAGTATAITGFVSTTGGALIGGAVGQLFNGTLQPLFGGYALFGVLTILATLWAENGKLF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE THPGDSDTTHEHGGGHL ECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]