| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396589
Identifier: 150396589
GI number: 150396589
Start: 1455468
End: 1456058
Strand: Direct
Name: 150396589
Synonym: Smed_1375
Alternate gene names: NA
Gene position: 1455468-1456058 (Clockwise)
Preceding gene: 150396588
Following gene: 150396591
Centisome position: 38.49
GC content: 60.74
Gene sequence:
>591_bases ATGCCGAGACACCTGCTCCTGCTGGCGACAATCGCCAGCGCCACCATTATCTTCGCCGCTACGCAGACAAAGGCGGGACC ACTCGCCGATGCCGCGGCCAGGGCCGAACAGCAGGCGAACTCGGGCGACGTCGCGGGGGCGCACGAAACATTGCGCAAGG CCGTGGGCGACTTTTCCCAGACTCTCCCCTTCGCTATCGGAAAGGCCGTGTTCGTCGAGGCAGCGCCGGCGGGCTTCGCG ATGTACGATCCCAAGCCCGACCCGGTCTTCAAAGGTGGCGAAACCCTCGTAACCTATGTCGAACCGGTGGGACTTACATG GAAGGAGGCGAGCGATAAGGGAAAGCTTGAGACGCGCTTCACGGTGGATTTCGACATTCTCAACCCGAAGGGAGAGGTGC TCGCCAGCCAGAAGGCGTTCGGCGACTTCACCTTCAAGGGCTATCAGCGCAATCAGGAAATCTATGCGACGTTGAGGATC GACGTCGCGGGGGCTCCATCCGGAGACTATGTGCTGCGCTACCGCTTCAACGATATCAACAGCGGCAGGAGCGCAAGCGT CGATCAACCATTCAAAATCAGCGGCCCTTGA
Upstream 100 bases:
>100_bases CCGGTCTTCTGGCGGCAGTAACGGCCGCTTCGCTGCGCTTGCTTGACTTGGTGTGCCAAATGCCGAAAGCTTACAAAAAT CGGGCATTCTGGGAAGCACG
Downstream 100 bases:
>100_bases GAGAGTGCGGGCTTCGGTGTACCGGTGGCCTCAATCGACCTGGACCCGGATGATATTCCAGTTGTTTTTGGTGCGGACGA CGGGAATCGAACCCGTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPRHLLLLATIASATIIFAATQTKAGPLADAAARAEQQANSGDVAGAHETLRKAVGDFSQTLPFAIGKAVFVEAAPAGFA MYDPKPDPVFKGGETLVTYVEPVGLTWKEASDKGKLETRFTVDFDILNPKGEVLASQKAFGDFTFKGYQRNQEIYATLRI DVAGAPSGDYVLRYRFNDINSGRSASVDQPFKISGP
Sequences:
>Translated_196_residues MPRHLLLLATIASATIIFAATQTKAGPLADAAARAEQQANSGDVAGAHETLRKAVGDFSQTLPFAIGKAVFVEAAPAGFA MYDPKPDPVFKGGETLVTYVEPVGLTWKEASDKGKLETRFTVDFDILNPKGEVLASQKAFGDFTFKGYQRNQEIYATLRI DVAGAPSGDYVLRYRFNDINSGRSASVDQPFKISGP >Mature_195_residues PRHLLLLATIASATIIFAATQTKAGPLADAAARAEQQANSGDVAGAHETLRKAVGDFSQTLPFAIGKAVFVEAAPAGFAM YDPKPDPVFKGGETLVTYVEPVGLTWKEASDKGKLETRFTVDFDILNPKGEVLASQKAFGDFTFKGYQRNQEIYATLRID VAGAPSGDYVLRYRFNDINSGRSASVDQPFKISGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21033; Mature: 20902
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRHLLLLATIASATIIFAATQTKAGPLADAAARAEQQANSGDVAGAHETLRKAVGDFSQ CCCEEEEEEEHHCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TLPFAIGKAVFVEAAPAGFAMYDPKPDPVFKGGETLVTYVEPVGLTWKEASDKGKLETRF HHHHHHCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEEEEE TVDFDILNPKGEVLASQKAFGDFTFKGYQRNQEIYATLRIDVAGAPSGDYVLRYRFNDIN EEEEEEECCCCCEEECCCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCC SGRSASVDQPFKISGP CCCCCCCCCCEEECCC >Mature Secondary Structure PRHLLLLATIASATIIFAATQTKAGPLADAAARAEQQANSGDVAGAHETLRKAVGDFSQ CCEEEEEEEHHCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TLPFAIGKAVFVEAAPAGFAMYDPKPDPVFKGGETLVTYVEPVGLTWKEASDKGKLETRF HHHHHHCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEEEEE TVDFDILNPKGEVLASQKAFGDFTFKGYQRNQEIYATLRIDVAGAPSGDYVLRYRFNDIN EEEEEEECCCCCEEECCCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCC SGRSASVDQPFKISGP CCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA