| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150396428
Identifier: 150396428
GI number: 150396428
Start: 1293387
End: 1293890
Strand: Direct
Name: 150396428
Synonym: Smed_1210
Alternate gene names: NA
Gene position: 1293387-1293890 (Clockwise)
Preceding gene: 150396427
Following gene: 150396429
Centisome position: 34.2
GC content: 57.74
Gene sequence:
>504_bases ATGAGCAACAGCAAACTATCGGTGGCAACCCTGCCAAGGATTGCTTTCGCGGCCTGTGTTTGGGTGTTCACGGCGGTCAG TGGCGTGGCCGCTGCAGATGAGGCCTCCAACAAGGCGACAGTACTGAAGGCCTTCGACGCGTGGGCTGCGGGCACCGGTA GCCCCTATGATCTTCTTGCTGACAACGTGACATGGACGATCACGGGGAATTCGGCTGCGTCCAAGTCCTATGGCAGCCGT GATGCCTTCATCAACGAGGTGATCAAGCCGTTCAATGCGCGCATGAGTGTTGGTCTCAAGCCGACGATCCGCAACATGTA TGCAGACGGCGATACCGTCATCGTCTTCTTCGATGCCGCTGGAACAGCGAAGGACGGCCAGCCATACAAGAACACGTACG CGTGGTTCCTGGACCTTGATGGCGGCAGGATCGTGAAGGCTTCGGCATTCTTCGACAGCATCGCATTCAACAAGCTCTGG GAGCTTCCGGCGGCTGGTGAGTAA
Upstream 100 bases:
>100_bases CTGGGAAGCCCAGATTTGAAATCTGGCGGCGTTGCCCCGCCGCTCTCCTCCGCCGTCGGGACGGCCCGGCGGCACTCAAC GCGATTCAAGGAGTTCAGAG
Downstream 100 bases:
>100_bases ACGCAGTCACTGCAAAAGGAGATCGAGATGAAGACCTGGTTCATAACCGGAGCGTCGCGCGGTTTTGGCGCCCGTATTGC GCAGCTTGCTCTCGAGCGCG
Product: ketosteroid isomerase-like protein
Products: NA
Alternate protein names: Ketosteroid Isomerase-Related Protein-Like Protein; Secreted Protein
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSNSKLSVATLPRIAFAACVWVFTAVSGVAAADEASNKATVLKAFDAWAAGTGSPYDLLADNVTWTITGNSAASKSYGSR DAFINEVIKPFNARMSVGLKPTIRNMYADGDTVIVFFDAAGTAKDGQPYKNTYAWFLDLDGGRIVKASAFFDSIAFNKLW ELPAAGE
Sequences:
>Translated_167_residues MSNSKLSVATLPRIAFAACVWVFTAVSGVAAADEASNKATVLKAFDAWAAGTGSPYDLLADNVTWTITGNSAASKSYGSR DAFINEVIKPFNARMSVGLKPTIRNMYADGDTVIVFFDAAGTAKDGQPYKNTYAWFLDLDGGRIVKASAFFDSIAFNKLW ELPAAGE >Mature_166_residues SNSKLSVATLPRIAFAACVWVFTAVSGVAAADEASNKATVLKAFDAWAAGTGSPYDLLADNVTWTITGNSAASKSYGSRD AFINEVIKPFNARMSVGLKPTIRNMYADGDTVIVFFDAAGTAKDGQPYKNTYAWFLDLDGGRIVKASAFFDSIAFNKLWE LPAAGE
Specific function: Unknown
COG id: COG3631
COG function: function code R; Ketosteroid isomerase-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17795; Mature: 17664
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSKLSVATLPRIAFAACVWVFTAVSGVAAADEASNKATVLKAFDAWAAGTGSPYDLLA CCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHCCCCCCCHHEEE DNVTWTITGNSAASKSYGSRDAFINEVIKPFNARMSVGLKPTIRNMYADGDTVIVFFDAA CCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCCEEEEEEECC GTAKDGQPYKNTYAWFLDLDGGRIVKASAFFDSIAFNKLWELPAAGE CCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SNSKLSVATLPRIAFAACVWVFTAVSGVAAADEASNKATVLKAFDAWAAGTGSPYDLLA CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHCCCCCCCHHEEE DNVTWTITGNSAASKSYGSRDAFINEVIKPFNARMSVGLKPTIRNMYADGDTVIVFFDAA CCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHCCCCCEEEEEEECC GTAKDGQPYKNTYAWFLDLDGGRIVKASAFFDSIAFNKLWELPAAGE CCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA