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The map label for this gene is yajC [H]

Identifier: 150396392

GI number: 150396392

Start: 1250772

End: 1251104

Strand: Direct

Name: yajC [H]

Synonym: Smed_1173

Alternate gene names: 150396392

Gene position: 1250772-1251104 (Clockwise)

Preceding gene: 150396390

Following gene: 150396393

Centisome position: 33.07

GC content: 60.36

Gene sequence:

>333_bases
ATGTTTATTACCGAAGCTTTCGCGCAGACGGCGGCCCCTGGGGGCGGCGGCGCCGATATTCTGATGTCCATCCTGCCATT
CCTGCTGATTTTCGTGGTCATGTATTTCCTGATCATCCGGCCGCAGCGTGCACAGATGAAGCGCCGCGAAGAACTGCTGA
AGAACATCCGGCGCGGCGATCAGGTCGTCACCGGCGGTGGTATCGTCGGCAAGGTGACCAAGGTCGTCGACGATACCGAA
CTCGAGGTGGAAATCGCCGAGGGCACTAAGGTCCGCGTCGTCCGCAGCGGCGTTTCCGAAGTTCGCGTGAAGGGCGAGCC
CGTCAAGGAATAG

Upstream 100 bases:

>100_bases
CGGGGAAGAGTGCAGGTGATTTGTGTTGCGGCACGGCTTTCCTATATTCCTGCAGGTTTGCCGCGGGGGCAAGCGCGCAA
TTGAACTCAAGGAGTGATCG

Downstream 100 bases:

>100_bases
CCCGTCGCGGGACTGAGAAGCGTGCGCGGATTTTTCGCCCGCATCCGCGCTTGCTATCGGCATGGATCACGTTTGATTTT
GGATCTGTCTGAGGCCAAAA

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MFITEAFAQTAAPGGGGADILMSILPFLLIFVVMYFLIIRPQRAQMKRREELLKNIRRGDQVVTGGGIVGKVTKVVDDTE
LEVEIAEGTKVRVVRSGVSEVRVKGEPVKE

Sequences:

>Translated_110_residues
MFITEAFAQTAAPGGGGADILMSILPFLLIFVVMYFLIIRPQRAQMKRREELLKNIRRGDQVVTGGGIVGKVTKVVDDTE
LEVEIAEGTKVRVVRSGVSEVRVKGEPVKE
>Mature_110_residues
MFITEAFAQTAAPGGGGADILMSILPFLLIFVVMYFLIIRPQRAQMKRREELLKNIRRGDQVVTGGGIVGKVTKVVDDTE
LEVEIAEGTKVRVVRSGVSEVRVKGEPVKE

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=105, Percent_Identity=38.0952380952381, Blast_Score=78, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12071; Mature: 12071

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFITEAFAQTAAPGGGGADILMSILPFLLIFVVMYFLIIRPQRAQMKRREELLKNIRRGD
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
QVVTGGGIVGKVTKVVDDTELEVEIAEGTKVRVVRSGVSEVRVKGEPVKE
EEEECCCHHHHHHHHHCCCCEEEEECCCCEEEHHHHCHHHHEECCCCCCC
>Mature Secondary Structure
MFITEAFAQTAAPGGGGADILMSILPFLLIFVVMYFLIIRPQRAQMKRREELLKNIRRGD
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
QVVTGGGIVGKVTKVVDDTELEVEIAEGTKVRVVRSGVSEVRVKGEPVKE
EEEECCCHHHHHHHHHCCCCEEEEECCCCEEEHHHHCHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]