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The map label for this gene is bioS [H]

Identifier: 150396389

GI number: 150396389

Start: 1246741

End: 1247391

Strand: Direct

Name: bioS [H]

Synonym: Smed_1170

Alternate gene names: 150396389

Gene position: 1246741-1247391 (Clockwise)

Preceding gene: 150396388

Following gene: 150396390

Centisome position: 32.97

GC content: 60.68

Gene sequence:

>651_bases
ATGCAGGTCGGGAACAGATTGAACGCTGCCGCTGCGGCTGGAGACGGCTTGGGCAATCTCGCCGGGCGGCCGGCCGACCA
GACCGGTGCCGCAAGCAAGAGCGAGAGCGGGGCGCAGCTTCCGCCGGCAAGCTTTCTCGATCCAACGCCCCGGATTTCGC
TTTCCGCTGATGCGCTGCTTTACCTCGGCCGGACCAAGAGAACGCTCGAGAAATTGCCGCCTCTCACAAAAGACGAGTGG
AACAACCATCTTTCGCCGCAGCTTGCGGCGCGCGAACATCAGGCGTTCGGCAAGTTCGCCCAAACCGCTGATTACAGGGC
CTATTATAGGGGCTTCATCGACTACTATGACAACCTTCGGCCGGAGGACCAGAATAGCCTGCGCTATTTCGGAACGCGCG
AGGCGGCGGTCGCGGGTTTGCGCTCGCTTGAATATGATGTGGAAAGCGGCCTCGATATCGGCGCCAACTTCGAAGGCCTG
GTCAGCGTTTTCCTCGAAGAGAATAAGACTGCCCTCTCGCCGGCAACCGCGCCGCCGCCGGCCGAACGCGCGTATTTCGC
TTGGGATGCATCCAACATCAGCTATGAGCACGAGGCGCCGGAGCCCAGGCTGATGACCGAAATAGAACGGTTGTATTCCG
AGCTGATCTAG

Upstream 100 bases:

>100_bases
AGCTCCGCGCAAGCTTGCAGTCCTAGGCCGGACAGCATGATCATGTCGCGTGTGGGCATTCCTTCCGCATCGCGCGTCAT
GCGAACGGCGGAGACGGCAT

Downstream 100 bases:

>100_bases
AGCACGAACGTGATTGGTTCCAATGGGGGATGCGGGCGGAAAGGCCGCGATATTTTTCTCATCCCGCTCCAGCGTTTCAT
CTTCGCGTCCTGCGTGCTGC

Product: biotin-regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MQVGNRLNAAAAAGDGLGNLAGRPADQTGAASKSESGAQLPPASFLDPTPRISLSADALLYLGRTKRTLEKLPPLTKDEW
NNHLSPQLAAREHQAFGKFAQTADYRAYYRGFIDYYDNLRPEDQNSLRYFGTREAAVAGLRSLEYDVESGLDIGANFEGL
VSVFLEENKTALSPATAPPPAERAYFAWDASNISYEHEAPEPRLMTEIERLYSELI

Sequences:

>Translated_216_residues
MQVGNRLNAAAAAGDGLGNLAGRPADQTGAASKSESGAQLPPASFLDPTPRISLSADALLYLGRTKRTLEKLPPLTKDEW
NNHLSPQLAAREHQAFGKFAQTADYRAYYRGFIDYYDNLRPEDQNSLRYFGTREAAVAGLRSLEYDVESGLDIGANFEGL
VSVFLEENKTALSPATAPPPAERAYFAWDASNISYEHEAPEPRLMTEIERLYSELI
>Mature_216_residues
MQVGNRLNAAAAAGDGLGNLAGRPADQTGAASKSESGAQLPPASFLDPTPRISLSADALLYLGRTKRTLEKLPPLTKDEW
NNHLSPQLAAREHQAFGKFAQTADYRAYYRGFIDYYDNLRPEDQNSLRYFGTREAAVAGLRSLEYDVESGLDIGANFEGL
VSVFLEENKTALSPATAPPPAERAYFAWDASNISYEHEAPEPRLMTEIERLYSELI

Specific function: May be part of a system that R.meliloti uses to respond to plant (alfalfa) biotin signals [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23728; Mature: 23728

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVGNRLNAAAAAGDGLGNLAGRPADQTGAASKSESGAQLPPASFLDPTPRISLSADALL
CCCCCCCCHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHE
YLGRTKRTLEKLPPLTKDEWNNHLSPQLAAREHQAFGKFAQTADYRAYYRGFIDYYDNLR
ECCCHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEDQNSLRYFGTREAAVAGLRSLEYDVESGLDIGANFEGLVSVFLEENKTALSPATAPPP
CCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
AERAYFAWDASNISYEHEAPEPRLMTEIERLYSELI
CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MQVGNRLNAAAAAGDGLGNLAGRPADQTGAASKSESGAQLPPASFLDPTPRISLSADALL
CCCCCCCCHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHE
YLGRTKRTLEKLPPLTKDEWNNHLSPQLAAREHQAFGKFAQTADYRAYYRGFIDYYDNLR
ECCCHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEDQNSLRYFGTREAAVAGLRSLEYDVESGLDIGANFEGLVSVFLEENKTALSPATAPPP
CCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
AERAYFAWDASNISYEHEAPEPRLMTEIERLYSELI
CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9304864; 11481430; 10494632 [H]