| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is atsA [H]
Identifier: 150396349
GI number: 150396349
Start: 1197841
End: 1199454
Strand: Direct
Name: atsA [H]
Synonym: Smed_1130
Alternate gene names: 150396349
Gene position: 1197841-1199454 (Clockwise)
Preceding gene: 150396348
Following gene: 150396350
Centisome position: 31.67
GC content: 58.3
Gene sequence:
>1614_bases ATGACCAAGCAGCCAAATATTCTGTTCATAATGTCGGACGACCATGCCGCCCGGGCGATATCGGCTTACGGCTCGGGCCT GAACAGCACGCCCAACATCGACCGCATCGCCAATGAGGGGATGCGGCTCGATCGGTGTTATGTCACCAATTCGATCTGCA CGCCCAGCCGCGCCGCTATTTTGACCGGTACCTATAACCATGTGAACATGGTCACCACGCTCGACACCCATATCGATAAT CGGCTCCCAAACGTCGCCAAGCACTTGCGCGCCGGTGGTTATCAGACGGCGATCTTCGGCAAGTGGCATCTGGGCGAGGG AAAGGCGCACGAGCCTTCGGGTTTCGATGAATGGTCCGTGGTTCCCGGCCAGGGTGAGTATTTCGATCCGGTGATGATCG ACCCGAGCGGCTCCCGCATGGAGAAGGGCTACGCCACCGACATCATCACCGACAAATGCCTCGATTTTCTCAGCAGGCGC GATATCGGAAGACCCTTCTTCCTGATGTGCCATCACAAGGCCCCACATCGGAGCTTCGAGCCGCATCCACGCTACAAACA ACTTTATGCAGACGGGAATCTGCCGGTTCCGGAAACATTTTCCGACGACTATTCCAACCGCGCCGCCGCTGCCGCCGCCG CGAAAATGCGCGTCCGCTCCGACATGACGTATAAGGACCTCGGTCTCGTCCAGCCCGAAGGCGGCGAGGAGACTGGCGAA CTGCTCCTGCCGGGCTGGACGCAGCGCAAGGTCCCCGATATCGCGGAAGGTGGATCGTTGCGTCTAATCGACGGGGCGAC AGGTGAGAACTACCTCTTCACCGATCCGCAGAAGCTGGCTCTTTTCAAATATCAGCGCTACATGATGCGTTATCTGCAGA CCATCGCCGCCGTGGACGACAATGTCGGCCGATTGCTCGACTATCTCGACGCGGAAGGACTGCGCGGCGACACCATCGTC ATCTACACGTCCGACCAGGGCTTCTTTCTCGGCGAACACGGCTGGTTCGACAAGCGCTTCATGTACGAAGAATCAATGCA GATGCCTTTCCTGATCCGCTATCCGCAAGGCATCGAGGCCGGCGTGCAGGCCAGCCACATCGCGACCAATGTCGACTTTG CGCCGACCTTTCTCGATTATGCCGGCTTGCAGATCCCCAGTTACATGCAGGGACGGAGCATGCGCCCGATTTTCGACCGA ACGGCAGATGACGGCGACACGGGCCTCGCCTATCACAGATATTGGATGCACAAGGACGAGTTCCACAACGCGTTCGCGCA TTACGGCGTTCGTGACGCGCGCTATAAGCTCATCTATTGGTATAACGATCCGCTCGGGCAACTCGGCGCCTTTTCCGGTG TTGAACCTCCGGAGTGGGAGCTGTTCGATTGTGAGAAGGACCCATTCGAACTTCATAACCGCGCGAACGACCCGGCCTAT TCGGAAATTTTCGAAGAATTGCTTGCCAAGCTCGATGCGCGCATGGCCGAGATCGGCGATACTCCGGAGCATAGGAGCGC TGAGGTGCTGGCTGGTCTGCGAAGCAGGGGTCTGAGCCTCGACATGCAATCGGATCAAGCGAACGACAGGCGGTGGGCAA TAGCTGCCCCTTAA
Upstream 100 bases:
>100_bases ACCCGGAGGATTATTATCTCGCCGACCTTTACGCGGGCAATTAGTCAAAGGCCAACACGCCGGCGGGTAACCTCGCCGGC ATTTTCCATCGAGACTGAAA
Downstream 100 bases:
>100_bases AGTGTGTTGACGAGTATGTGGCTCTGAAAAAGCGACATGATGGCTTGATTTCTCGGGCGGTTGCCGGTATGGGGCAGCCA TTCCACACGTGAGGCATGGG
Product: sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MTKQPNILFIMSDDHAARAISAYGSGLNSTPNIDRIANEGMRLDRCYVTNSICTPSRAAILTGTYNHVNMVTTLDTHIDN RLPNVAKHLRAGGYQTAIFGKWHLGEGKAHEPSGFDEWSVVPGQGEYFDPVMIDPSGSRMEKGYATDIITDKCLDFLSRR DIGRPFFLMCHHKAPHRSFEPHPRYKQLYADGNLPVPETFSDDYSNRAAAAAAAKMRVRSDMTYKDLGLVQPEGGEETGE LLLPGWTQRKVPDIAEGGSLRLIDGATGENYLFTDPQKLALFKYQRYMMRYLQTIAAVDDNVGRLLDYLDAEGLRGDTIV IYTSDQGFFLGEHGWFDKRFMYEESMQMPFLIRYPQGIEAGVQASHIATNVDFAPTFLDYAGLQIPSYMQGRSMRPIFDR TADDGDTGLAYHRYWMHKDEFHNAFAHYGVRDARYKLIYWYNDPLGQLGAFSGVEPPEWELFDCEKDPFELHNRANDPAY SEIFEELLAKLDARMAEIGDTPEHRSAEVLAGLRSRGLSLDMQSDQANDRRWAIAAP
Sequences:
>Translated_537_residues MTKQPNILFIMSDDHAARAISAYGSGLNSTPNIDRIANEGMRLDRCYVTNSICTPSRAAILTGTYNHVNMVTTLDTHIDN RLPNVAKHLRAGGYQTAIFGKWHLGEGKAHEPSGFDEWSVVPGQGEYFDPVMIDPSGSRMEKGYATDIITDKCLDFLSRR DIGRPFFLMCHHKAPHRSFEPHPRYKQLYADGNLPVPETFSDDYSNRAAAAAAAKMRVRSDMTYKDLGLVQPEGGEETGE LLLPGWTQRKVPDIAEGGSLRLIDGATGENYLFTDPQKLALFKYQRYMMRYLQTIAAVDDNVGRLLDYLDAEGLRGDTIV IYTSDQGFFLGEHGWFDKRFMYEESMQMPFLIRYPQGIEAGVQASHIATNVDFAPTFLDYAGLQIPSYMQGRSMRPIFDR TADDGDTGLAYHRYWMHKDEFHNAFAHYGVRDARYKLIYWYNDPLGQLGAFSGVEPPEWELFDCEKDPFELHNRANDPAY SEIFEELLAKLDARMAEIGDTPEHRSAEVLAGLRSRGLSLDMQSDQANDRRWAIAAP >Mature_536_residues TKQPNILFIMSDDHAARAISAYGSGLNSTPNIDRIANEGMRLDRCYVTNSICTPSRAAILTGTYNHVNMVTTLDTHIDNR LPNVAKHLRAGGYQTAIFGKWHLGEGKAHEPSGFDEWSVVPGQGEYFDPVMIDPSGSRMEKGYATDIITDKCLDFLSRRD IGRPFFLMCHHKAPHRSFEPHPRYKQLYADGNLPVPETFSDDYSNRAAAAAAAKMRVRSDMTYKDLGLVQPEGGEETGEL LLPGWTQRKVPDIAEGGSLRLIDGATGENYLFTDPQKLALFKYQRYMMRYLQTIAAVDDNVGRLLDYLDAEGLRGDTIVI YTSDQGFFLGEHGWFDKRFMYEESMQMPFLIRYPQGIEAGVQASHIATNVDFAPTFLDYAGLQIPSYMQGRSMRPIFDRT ADDGDTGLAYHRYWMHKDEFHNAFAHYGVRDARYKLIYWYNDPLGQLGAFSGVEPPEWELFDCEKDPFELHNRANDPAYS EIFEELLAKLDARMAEIGDTPEHRSAEVLAGLRSRGLSLDMQSDQANDRRWAIAAP
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI4504061, Length=424, Percent_Identity=25.4716981132075, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI39930577, Length=516, Percent_Identity=24.6124031007752, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI157266309, Length=546, Percent_Identity=26.3736263736264, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI4503899, Length=208, Percent_Identity=32.2115384615385, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI240255483, Length=129, Percent_Identity=36.4341085271318, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI29789100, Length=129, Percent_Identity=36.4341085271318, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI240255478, Length=129, Percent_Identity=36.4341085271318, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI109389362, Length=212, Percent_Identity=30.6603773584906, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI58743319, Length=118, Percent_Identity=39.8305084745763, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI189571643, Length=111, Percent_Identity=38.7387387387387, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI189571641, Length=111, Percent_Identity=38.7387387387387, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI189571638, Length=111, Percent_Identity=38.7387387387387, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI189571636, Length=111, Percent_Identity=38.7387387387387, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI146229331, Length=112, Percent_Identity=40.1785714285714, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI146229329, Length=112, Percent_Identity=40.1785714285714, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI6005990, Length=112, Percent_Identity=40.1785714285714, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI146229324, Length=112, Percent_Identity=40.1785714285714, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI45430057, Length=239, Percent_Identity=28.0334728033473, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI53831991, Length=114, Percent_Identity=36.8421052631579, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI31742482, Length=138, Percent_Identity=34.7826086956522, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI71852586, Length=138, Percent_Identity=34.0579710144928, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI71852584, Length=138, Percent_Identity=34.0579710144928, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI59797060, Length=198, Percent_Identity=28.7878787878788, Blast_Score=70, Evalue=7e-12, Organism=Escherichia coli, GI1790112, Length=230, Percent_Identity=26.9565217391304, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790233, Length=125, Percent_Identity=32.8, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17568795, Length=204, Percent_Identity=28.4313725490196, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI281363223, Length=245, Percent_Identity=33.469387755102, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24647401, Length=112, Percent_Identity=42.8571428571429, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24666175, Length=207, Percent_Identity=31.8840579710145, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI281366397, Length=213, Percent_Identity=31.4553990610329, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI281366395, Length=213, Percent_Identity=31.4553990610329, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI24666163, Length=213, Percent_Identity=31.4553990610329, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI21356831, Length=234, Percent_Identity=29.0598290598291, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI24666109, Length=219, Percent_Identity=31.5068493150685, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24653364, Length=113, Percent_Identity=37.1681415929204, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI19922168, Length=113, Percent_Identity=37.1681415929204, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 60730; Mature: 60599
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00523 SULFATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQPNILFIMSDDHAARAISAYGSGLNSTPNIDRIANEGMRLDRCYVTNSICTPSRAAI CCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCEE LTGTYNHVNMVTTLDTHIDNRLPNVAKHLRAGGYQTAIFGKWHLGEGKAHEPSGFDEWSV EEECCCCEEEEEEEHHHHHHCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCE VPGQGEYFDPVMIDPSGSRMEKGYATDIITDKCLDFLSRRDIGRPFFLMCHHKAPHRSFE ECCCCCCCCCEEECCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC PHPRYKQLYADGNLPVPETFSDDYSNRAAAAAAAKMRVRSDMTYKDLGLVQPEGGEETGE CCCCHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC LLLPGWTQRKVPDIAEGGSLRLIDGATGENYLFTDPQKLALFKYQRYMMRYLQTIAAVDD EECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC NVGRLLDYLDAEGLRGDTIVIYTSDQGFFLGEHGWFDKRFMYEESMQMPFLIRYPQGIEA CHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCC GVQASHIATNVDFAPTFLDYAGLQIPSYMQGRSMRPIFDRTADDGDTGLAYHRYWMHKDE CCCHHHHEECCCCCHHHHHHCCCCCCHHHCCCCCCCHHHCCCCCCCCCCEEHHHHCCHHH FHNAFAHYGVRDARYKLIYWYNDPLGQLGAFSGVEPPEWELFDCEKDPFELHNRANDPAY HHHHHHHCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCHH SEIFEELLAKLDARMAEIGDTPEHRSAEVLAGLRSRGLSLDMQSDQANDRRWAIAAP HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEECC >Mature Secondary Structure TKQPNILFIMSDDHAARAISAYGSGLNSTPNIDRIANEGMRLDRCYVTNSICTPSRAAI CCCCCEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCEE LTGTYNHVNMVTTLDTHIDNRLPNVAKHLRAGGYQTAIFGKWHLGEGKAHEPSGFDEWSV EEECCCCEEEEEEEHHHHHHCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCE VPGQGEYFDPVMIDPSGSRMEKGYATDIITDKCLDFLSRRDIGRPFFLMCHHKAPHRSFE ECCCCCCCCCEEECCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC PHPRYKQLYADGNLPVPETFSDDYSNRAAAAAAAKMRVRSDMTYKDLGLVQPEGGEETGE CCCCHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCC LLLPGWTQRKVPDIAEGGSLRLIDGATGENYLFTDPQKLALFKYQRYMMRYLQTIAAVDD EECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC NVGRLLDYLDAEGLRGDTIVIYTSDQGFFLGEHGWFDKRFMYEESMQMPFLIRYPQGIEA CHHHHHHHHCCCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHCCCCEEEECCCCCCC GVQASHIATNVDFAPTFLDYAGLQIPSYMQGRSMRPIFDRTADDGDTGLAYHRYWMHKDE CCCHHHHEECCCCCHHHHHHCCCCCCHHHCCCCCCCHHHCCCCCCCCCCEEHHHHCCHHH FHNAFAHYGVRDARYKLIYWYNDPLGQLGAFSGVEPPEWELFDCEKDPFELHNRANDPAY HHHHHHHCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCEEEECCCCHHHHHCCCCCCHH SEIFEELLAKLDARMAEIGDTPEHRSAEVLAGLRSRGLSLDMQSDQANDRRWAIAAP HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]