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The map label for this gene is ssuA [C]

Identifier: 150396348

GI number: 150396348

Start: 1196783

End: 1197784

Strand: Direct

Name: ssuA [C]

Synonym: Smed_1129

Alternate gene names: 150396348

Gene position: 1196783-1197784 (Clockwise)

Preceding gene: 150396347

Following gene: 150396349

Centisome position: 31.64

GC content: 59.18

Gene sequence:

>1002_bases
ATGAGGAGGAATACCGTGACTTTTACCCGACGCAGTTTTCTTGGTGCTGCCGCTGCCGGAGCGCTCGCAACCCCGATGCT
GGGTGTCGCCACGCGACGCGGTTACGCTCAGGTCAAGCCCGTAAGAATAGGTTACATCGCCGACTATTTCGGCACGAGCC
TAACGGCCATCGCCACCGACCAGAACTTGTGGGCCAAACATGGCCTCGAGCCCGACTTGAAGGTGTTCACCAACGGCCCG
ATCCAGATCCAGGCGTTGGGCGCGGGCAGCCTCGATTTCGGCTATGTCGGTCCCGGTGCCCTTTGGCTTCCGGCCATGGG
CAAGGCCAAACTCGTCGCGATCAATGCGCTCGGCCTGTCCGACCGTGTGATTGCGCAGAAAGGCATCAACTCGGTGGCGG
ATCTGAAGGGGAAAAAGGTCGGCGTTCCGGAGGGCACGTCAGGTGACATGCTTTTGCGTCTAGGGCTCGCCAAGGCCGGC
ATGTCGATTTCCGACATAGAAGTGGTCAAAATGGACCCATCGACCGTTGTTGCGGCCTTTGCGTCGAAGCAGATCGATGG
CGCCGGCATCTGGTATCCCCTGGTTGGCATTATCAGAAAGACCGTCCCGGATCTGGTTGAAGTCGCCAAGAGCGACGAAT
TCTATCCGGAAAATTCGTTCCCGTCGGCCTTCGTCGCCCGAAATGAGGTGATCACCGACGACATCGACATGGCCGGAAAG
TTCGTCGCCACGATGAAGGAGGCCAACGACTATCGCGCTGCCGACGTGCCGCGCTCGGTCGAAATCACCGCCAAATTCCT
CGGCGTGCCGATAGAACCGCTTCAAGTCGAAAGCGAGAACGGCAAGTTTTTGACTTCGGAGGAGCTTGCCGCCGCCAGCA
AGGATGGCACGGTGGCCGGCTGGCTGAAGGGACTCAATGACCAGTTCGTTGCTTTCGGCAAGATGCAGGACCCGCTCGAC
CCGGAGGATTATTATCTCGCCGACCTTTACGCGGGCAATTAG

Upstream 100 bases:

>100_bases
CGCACGGAGGAAATGCGGTTGTCGCCTGAATTCGCGGAAATCCGCAATCAGGTTTGGCACGCCGTCTATCACCAGAATAC
CCGGACAAACTAAGCTCACG

Downstream 100 bases:

>100_bases
TCAAAGGCCAACACGCCGGCGGGTAACCTCGCCGGCATTTTCCATCGAGACTGAAAATGACCAAGCAGCCAAATATTCTG
TTCATAATGTCGGACGACCA

Product: aliphatic sulfonate ABC transporter periplasmic ligand-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MRRNTVTFTRRSFLGAAAAGALATPMLGVATRRGYAQVKPVRIGYIADYFGTSLTAIATDQNLWAKHGLEPDLKVFTNGP
IQIQALGAGSLDFGYVGPGALWLPAMGKAKLVAINALGLSDRVIAQKGINSVADLKGKKVGVPEGTSGDMLLRLGLAKAG
MSISDIEVVKMDPSTVVAAFASKQIDGAGIWYPLVGIIRKTVPDLVEVAKSDEFYPENSFPSAFVARNEVITDDIDMAGK
FVATMKEANDYRAADVPRSVEITAKFLGVPIEPLQVESENGKFLTSEELAAASKDGTVAGWLKGLNDQFVAFGKMQDPLD
PEDYYLADLYAGN

Sequences:

>Translated_333_residues
MRRNTVTFTRRSFLGAAAAGALATPMLGVATRRGYAQVKPVRIGYIADYFGTSLTAIATDQNLWAKHGLEPDLKVFTNGP
IQIQALGAGSLDFGYVGPGALWLPAMGKAKLVAINALGLSDRVIAQKGINSVADLKGKKVGVPEGTSGDMLLRLGLAKAG
MSISDIEVVKMDPSTVVAAFASKQIDGAGIWYPLVGIIRKTVPDLVEVAKSDEFYPENSFPSAFVARNEVITDDIDMAGK
FVATMKEANDYRAADVPRSVEITAKFLGVPIEPLQVESENGKFLTSEELAAASKDGTVAGWLKGLNDQFVAFGKMQDPLD
PEDYYLADLYAGN
>Mature_333_residues
MRRNTVTFTRRSFLGAAAAGALATPMLGVATRRGYAQVKPVRIGYIADYFGTSLTAIATDQNLWAKHGLEPDLKVFTNGP
IQIQALGAGSLDFGYVGPGALWLPAMGKAKLVAINALGLSDRVIAQKGINSVADLKGKKVGVPEGTSGDMLLRLGLAKAG
MSISDIEVVKMDPSTVVAAFASKQIDGAGIWYPLVGIIRKTVPDLVEVAKSDEFYPENSFPSAFVARNEVITDDIDMAGK
FVATMKEANDYRAADVPRSVEITAKFLGVPIEPLQVESENGKFLTSEELAAASKDGTVAGWLKGLNDQFVAFGKMQDPLD
PEDYYLADLYAGN

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=275, Percent_Identity=27.6363636363636, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87081727, Length=148, Percent_Identity=28.3783783783784, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35484; Mature: 35484

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNTVTFTRRSFLGAAAAGALATPMLGVATRRGYAQVKPVRIGYIADYFGTSLTAIATD
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEEEEEHHHHCCEEEEEEEC
QNLWAKHGLEPDLKVFTNGPIQIQALGAGSLDFGYVGPGALWLPAMGKAKLVAINALGLS
CCHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCC
DRVIAQKGINSVADLKGKKVGVPEGTSGDMLLRLGLAKAGMSISDIEVVKMDPSTVVAAF
CHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEEEECCHHHHHHH
ASKQIDGAGIWYPLVGIIRKTVPDLVEVAKSDEFYPENSFPSAFVARNEVITDDIDMAGK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEECCCHHHHHH
FVATMKEANDYRAADVPRSVEITAKFLGVPIEPLQVESENGKFLTSEELAAASKDGTVAG
HHHHHHHCCCCCCCCCCCCEEEEEHHHCCCCCCEEEECCCCCEEEHHHHHHCCCCCCHHH
WLKGLNDQFVAFGKMQDPLDPEDYYLADLYAGN
HHHCCCCCEEEECCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MRRNTVTFTRRSFLGAAAAGALATPMLGVATRRGYAQVKPVRIGYIADYFGTSLTAIATD
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECEEEEEEEHHHHCCEEEEEEEC
QNLWAKHGLEPDLKVFTNGPIQIQALGAGSLDFGYVGPGALWLPAMGKAKLVAINALGLS
CCHHHHCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCC
DRVIAQKGINSVADLKGKKVGVPEGTSGDMLLRLGLAKAGMSISDIEVVKMDPSTVVAAF
CHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEEEECCHHHHHHH
ASKQIDGAGIWYPLVGIIRKTVPDLVEVAKSDEFYPENSFPSAFVARNEVITDDIDMAGK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEECCCHHHHHH
FVATMKEANDYRAADVPRSVEITAKFLGVPIEPLQVESENGKFLTSEELAAASKDGTVAG
HHHHHHHCCCCCCCCCCCCEEEEEHHHCCCCCCEEEECCCCCEEEHHHHHHCCCCCCHHH
WLKGLNDQFVAFGKMQDPLDPEDYYLADLYAGN
HHHCCCCCEEEECCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]