| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150396300
Identifier: 150396300
GI number: 150396300
Start: 1149034
End: 1149615
Strand: Direct
Name: 150396300
Synonym: Smed_1080
Alternate gene names: NA
Gene position: 1149034-1149615 (Clockwise)
Preceding gene: 150396299
Following gene: 150396301
Centisome position: 30.38
GC content: 61.86
Gene sequence:
>582_bases ATGACGGCTGGCGCGACCCTCAGGCCTGCGAAACGAAGCGAAGCGGCGGAACTTGCGATTCTCATCGATATCGCCTCGCA TGGCTTTGCCTCGTGGCTCTGGTACGGCGGCGTCTTGAACAAATCCGCGGAAACCGCTTTGGAGCATGGCCGCAATCTTT TGCGTCGCGATGACGAGCCCGGTGCGTGGCAGGATGCGGTGGTGGCCGAAATCGGCGGGGAGATCGCCGGCCTGTCCGTA TCCTACGGCATCGATGCATCGATCCTGACCCTCGAGCCGAAGCATCCGGTTCTTGCGCCATTGATCCACCTGCAGAGGCA GGTTGTCGGCCATTGGTTCATCGACAGCCTCGGCGTCTACCGCCACCATCGCGGCAAAGGCATGGGCCGGGCGCTGCTGC AGAACGAGATTTCCCGCGCTGGACAGGCGCCGGTGAGCCTGATCACCGAAAGCCACAATGAAACGGCACAGGCACTCTAC AGGATGAACGGCTTCGAGGAAGTGGCGCGCGCCGCTGCGGTTCCACTCTTCGAAGACAGCAGGAAACACGACTGGGTGCT TTTCACCCGCAACGTCGCTTGA
Upstream 100 bases:
>100_bases GGACGTCGCCGATCGATGGTGTCCACCTCGACGCGGAAAACACGCGGGCGATCGGCCGGGGGTTGGAACCCGTCGTGCGG ATGATGCTCGGGCTCTGACG
Downstream 100 bases:
>100_bases CGCAAAGGTAGGAAAAACATGGCTGAGAATTACGACGTGATCGTTGTCGGTTCGGGTCCGGGCGGCTACGTTACCGCCAT CCGCTCGGCACAACTTGGCT
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase Protein
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTAGATLRPAKRSEAAELAILIDIASHGFASWLWYGGVLNKSAETALEHGRNLLRRDDEPGAWQDAVVAEIGGEIAGLSV SYGIDASILTLEPKHPVLAPLIHLQRQVVGHWFIDSLGVYRHHRGKGMGRALLQNEISRAGQAPVSLITESHNETAQALY RMNGFEEVARAAAVPLFEDSRKHDWVLFTRNVA
Sequences:
>Translated_193_residues MTAGATLRPAKRSEAAELAILIDIASHGFASWLWYGGVLNKSAETALEHGRNLLRRDDEPGAWQDAVVAEIGGEIAGLSV SYGIDASILTLEPKHPVLAPLIHLQRQVVGHWFIDSLGVYRHHRGKGMGRALLQNEISRAGQAPVSLITESHNETAQALY RMNGFEEVARAAAVPLFEDSRKHDWVLFTRNVA >Mature_192_residues TAGATLRPAKRSEAAELAILIDIASHGFASWLWYGGVLNKSAETALEHGRNLLRRDDEPGAWQDAVVAEIGGEIAGLSVS YGIDASILTLEPKHPVLAPLIHLQRQVVGHWFIDSLGVYRHHRGKGMGRALLQNEISRAGQAPVSLITESHNETAQALYR MNGFEEVARAAAVPLFEDSRKHDWVLFTRNVA
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21135; Mature: 21004
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGATLRPAKRSEAAELAILIDIASHGFASWLWYGGVLNKSAETALEHGRNLLRRDDEP CCCCCCCCCCCCCCHHEEEEEEEEHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC GAWQDAVVAEIGGEIAGLSVSYGIDASILTLEPKHPVLAPLIHLQRQVVGHWFIDSLGVY CCHHHHHHHHHCCCEECEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RHHRGKGMGRALLQNEISRAGQAPVSLITESHNETAQALYRMNGFEEVARAAAVPLFEDS HHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCC RKHDWVLFTRNVA CCCCEEEEEECCC >Mature Secondary Structure TAGATLRPAKRSEAAELAILIDIASHGFASWLWYGGVLNKSAETALEHGRNLLRRDDEP CCCCCCCCCCCCCHHEEEEEEEEHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC GAWQDAVVAEIGGEIAGLSVSYGIDASILTLEPKHPVLAPLIHLQRQVVGHWFIDSLGVY CCHHHHHHHHHCCCEECEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RHHRGKGMGRALLQNEISRAGQAPVSLITESHNETAQALYRMNGFEEVARAAAVPLFEDS HHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCC RKHDWVLFTRNVA CCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA