Click here to switch to the map view.

The map label for this gene is 150396294

Identifier: 150396294

GI number: 150396294

Start: 1142718

End: 1143572

Strand: Direct

Name: 150396294

Synonym: Smed_1074

Alternate gene names: NA

Gene position: 1142718-1143572 (Clockwise)

Preceding gene: 150396293

Following gene: 150396295

Centisome position: 30.22

GC content: 58.95

Gene sequence:

>855_bases
ATGCATATTGGGAAATACTTCGGCCTTTCGGCCGCTTTCATAGTGGGTGGCTGTGCAACGTCGGAAACCATGGTCCTGAA
GCCGTACAGGCTGGAAAATGGTGTGGTTCTGCAGGACGTGGTCACTGTCGGTGGCAACGGCAAGGGTACGGCGCCGGTGG
TGACGGCGGTGAAGACCTTTGAGCTTGCTGGAAATAAGACCCGGCTGGTTCATAGCGCCTCGGGCTCCGAAGGCAGCATG
GGATCTGCGGTCGCGCGCGCAGTTGCTAGCGGTGTTGCTGCCGGCGTGCCTGCGGCGGTTGCTCAGGTCATCGCGAACCG
GGCGGACGGGGAGAGGATTACGGTCAGCAACAGCAACAGCAGCAGCCCGGTCAATACCAATACGAACACTCCGACCAACA
CCAACAACCCGACCAACACCAACACCAACAACCCGACCAACACCAACACTAATAATCCGACCAACACCAACACCAATACC
AGCATGCCCACCAACACGAACACGAACACGAACACCAACGACAACGCCCCGGAACCTGACGCTAACGAGGCAAGCGACCG
CCGGCTGAAGCGGGACATCGCGCGGCTTGCGGAACTGGCGAACGGCCTCGGCGTCTATCGTTTCCGCTATCTGTGGAGCG
ACGAGGTCTTTGTCGGTGTCATGGCTCAGGAAGTGCTCGAGGTGATGCCTGAAGCTGTCGTGATCGGATCGGACGGCTAT
ATGCGTGTGAACTATACGAAGCTCGGCATCGAAATGCTGTCCCTGGAGCAATGGACGTCACGGCTGGTGGCCGGTGTTCC
ATCCAGCCGTGCATTGCGTATGGACCATCGGTCGCTTGCACTTGCCTCTCGGTAA

Upstream 100 bases:

>100_bases
GCGTGTCACCCGTAGGCAGGAGCTTATTCTCGTATAAGCAGTGACTTGTGCAACCTCCACAAGTCGATTCGCGGGAATCT
CACGCACGATTGGAGAATGC

Downstream 100 bases:

>100_bases
CGATTGCCATGACCGGGCAAAGTGCACGTGCCTTGTCTGATCCGAAAGTCATCCTCCGGCTCGGACGGCCCCATGCCGAG
GATGACGAGTGGAAGAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MHIGKYFGLSAAFIVGGCATSETMVLKPYRLENGVVLQDVVTVGGNGKGTAPVVTAVKTFELAGNKTRLVHSASGSEGSM
GSAVARAVASGVAAGVPAAVAQVIANRADGERITVSNSNSSSPVNTNTNTPTNTNNPTNTNTNNPTNTNTNNPTNTNTNT
SMPTNTNTNTNTNDNAPEPDANEASDRRLKRDIARLAELANGLGVYRFRYLWSDEVFVGVMAQEVLEVMPEAVVIGSDGY
MRVNYTKLGIEMLSLEQWTSRLVAGVPSSRALRMDHRSLALASR

Sequences:

>Translated_284_residues
MHIGKYFGLSAAFIVGGCATSETMVLKPYRLENGVVLQDVVTVGGNGKGTAPVVTAVKTFELAGNKTRLVHSASGSEGSM
GSAVARAVASGVAAGVPAAVAQVIANRADGERITVSNSNSSSPVNTNTNTPTNTNNPTNTNTNNPTNTNTNNPTNTNTNT
SMPTNTNTNTNTNDNAPEPDANEASDRRLKRDIARLAELANGLGVYRFRYLWSDEVFVGVMAQEVLEVMPEAVVIGSDGY
MRVNYTKLGIEMLSLEQWTSRLVAGVPSSRALRMDHRSLALASR
>Mature_284_residues
MHIGKYFGLSAAFIVGGCATSETMVLKPYRLENGVVLQDVVTVGGNGKGTAPVVTAVKTFELAGNKTRLVHSASGSEGSM
GSAVARAVASGVAAGVPAAVAQVIANRADGERITVSNSNSSSPVNTNTNTPTNTNNPTNTNTNNPTNTNTNNPTNTNTNT
SMPTNTNTNTNTNDNAPEPDANEASDRRLKRDIARLAELANGLGVYRFRYLWSDEVFVGVMAQEVLEVMPEAVVIGSDGY
MRVNYTKLGIEMLSLEQWTSRLVAGVPSSRALRMDHRSLALASR

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30020; Mature: 30020

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIGKYFGLSAAFIVGGCATSETMVLKPYRLENGVVLQDVVTVGGNGKGTAPVVTAVKTF
CCCCCHHCCCEEEEEECCCCCCEEEEECEECCCCEEEEEEEEECCCCCCCCHHHHHHHHH
ELAGNKTRLVHSASGSEGSMGSAVARAVASGVAAGVPAAVAQVIANRADGERITVSNSNS
EECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCC
SSPVNTNTNTPTNTNNPTNTNTNNPTNTNTNNPTNTNTNTSMPTNTNTNTNTNDNAPEPD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ANEASDRRLKRDIARLAELANGLGVYRFRYLWSDEVFVGVMAQEVLEVMPEAVVIGSDGY
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCE
MRVNYTKLGIEMLSLEQWTSRLVAGVPSSRALRMDHRSLALASR
EEEEEHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCC
>Mature Secondary Structure
MHIGKYFGLSAAFIVGGCATSETMVLKPYRLENGVVLQDVVTVGGNGKGTAPVVTAVKTF
CCCCCHHCCCEEEEEECCCCCCEEEEECEECCCCEEEEEEEEECCCCCCCCHHHHHHHHH
ELAGNKTRLVHSASGSEGSMGSAVARAVASGVAAGVPAAVAQVIANRADGERITVSNSNS
EECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCC
SSPVNTNTNTPTNTNNPTNTNTNNPTNTNTNNPTNTNTNTSMPTNTNTNTNTNDNAPEPD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ANEASDRRLKRDIARLAELANGLGVYRFRYLWSDEVFVGVMAQEVLEVMPEAVVIGSDGY
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCE
MRVNYTKLGIEMLSLEQWTSRLVAGVPSSRALRMDHRSLALASR
EEEEEHHHCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA