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The map label for this gene is ycaQ [H]

Identifier: 150395728

GI number: 150395728

Start: 546739

End: 547938

Strand: Direct

Name: ycaQ [H]

Synonym: Smed_0504

Alternate gene names: 150395728

Gene position: 546739-547938 (Clockwise)

Preceding gene: 150395722

Following gene: 150395729

Centisome position: 14.46

GC content: 61.75

Gene sequence:

>1200_bases
ATGACGATTCGCCTTTCCAATCGCGATGCCCGCCGCATCTTTCTCGCCAAGCAGGGGCTTTCGGCCGCGCCGCATCGCGC
GCTCGGCAAGGATGGCCTGCTGCAGTTGATTCACGAGATCGGCTTCGTGCAGGTCGACAGCATAGCGACCGTCGAAAGGG
CCCATCATCAGATTCTCTTTTCCCGTAATCAGACCTATCGCCGCGAGCATCTGGCGGAGCTCCTGGAAAAGGACGGCGAG
CTCTTCGAGCACTGGACCCACGACGCTTCGATCATCCCGAGCACCTTCTTCGTCTATTGGAAGCATCGTTTCAAATGGGA
GAGCGAAACGCTCCGCGAGCGGTGGCGCAAATGGCGCGGAGACGGTTTCGATGCAAGCTGCGACGAAACGTATGAGCGGA
TCGCCGCCAACGGTGCCGTCATGTCGCGCGATCTGAAGGAAGAGGGTCACCAGTCCGGCGGCTGGTGGAACTGGCATCCG
TCGAAGACGGCGCTGGAGGTGCTCTGGCGGCAGGGGAAGCTTGCGATCGCGCGCCGCGAAAACTTCCAGAAGGTGTATGA
TCTGACGGAACGCGTCATTCCAGTCCGCCATTACGAAGGCGAGGTTGCGCATGAGGAATTTATCGACTGGGCCTGCCGCA
GCGCGCTCGAGCGGTTGGGCTTTGCGACCCACGGAGAGATCGCGGCCTTCTGGGACCTCGTATCGCCGGACGAGGCGAAG
GGCTGGGTCGCCGCCCATCGCGACGAGTTATGCGACATCGTCATCGAGTCGGCCAATGGCGGCAAGCCGCGCCCGTCCTA
TGCTTTCGCGCACTTCCCGGATGGTCTTGGCGACATTCCCGAGCCACCCGGCCGCATCCGGGTGCTGAGCCCCTTTGATC
CGCTGCTGCGCGACCGGAACCGGGCCGAGCGGCTTTTCGATTTCTTTTATCGCATCGAGGTTTTCGTGCCGGAGCCGAAG
CGGGAATATGGCTATTATGTCTTCCCTTTACTCGAAGGCGACCGGCTCATCGGCCGCATCGACATGAAGGCCGATCGCAG
GGGTGGAAGCCTCGACGTGCGGCGCCTTTGGCTGGAGCGGGGCGTCAGGGCATCATCGGGCCGAATGGAAAAGCTGATGG
CCGAACTCGATCGGGTTGCCCGTTTTGCCGGCGTCGAGAAGGTCAAACTGCTCGAAAGCTGGAACGCTGCCCTTTCCTGA

Upstream 100 bases:

>100_bases
TGGGTGACCGCTCTATAGGACAAGTCGGTCGGATAGAGCAATGTGGCACATTCTGTCGGTTCCCGTTTGAAACCTGGGAA
TAAAAGCCTACTCTTTGCTC

Downstream 100 bases:

>100_bases
CCGATTTCCGGTGGTGTGTTTTTTCTTGGCTTGTCGGCCGGCTCTCCCTAAATGGAGCCAATACGTTTCACGACCCAATC
CTTCACGGCAGGGAGCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTIRLSNRDARRIFLAKQGLSAAPHRALGKDGLLQLIHEIGFVQVDSIATVERAHHQILFSRNQTYRREHLAELLEKDGE
LFEHWTHDASIIPSTFFVYWKHRFKWESETLRERWRKWRGDGFDASCDETYERIAANGAVMSRDLKEEGHQSGGWWNWHP
SKTALEVLWRQGKLAIARRENFQKVYDLTERVIPVRHYEGEVAHEEFIDWACRSALERLGFATHGEIAAFWDLVSPDEAK
GWVAAHRDELCDIVIESANGGKPRPSYAFAHFPDGLGDIPEPPGRIRVLSPFDPLLRDRNRAERLFDFFYRIEVFVPEPK
REYGYYVFPLLEGDRLIGRIDMKADRRGGSLDVRRLWLERGVRASSGRMEKLMAELDRVARFAGVEKVKLLESWNAALS

Sequences:

>Translated_399_residues
MTIRLSNRDARRIFLAKQGLSAAPHRALGKDGLLQLIHEIGFVQVDSIATVERAHHQILFSRNQTYRREHLAELLEKDGE
LFEHWTHDASIIPSTFFVYWKHRFKWESETLRERWRKWRGDGFDASCDETYERIAANGAVMSRDLKEEGHQSGGWWNWHP
SKTALEVLWRQGKLAIARRENFQKVYDLTERVIPVRHYEGEVAHEEFIDWACRSALERLGFATHGEIAAFWDLVSPDEAK
GWVAAHRDELCDIVIESANGGKPRPSYAFAHFPDGLGDIPEPPGRIRVLSPFDPLLRDRNRAERLFDFFYRIEVFVPEPK
REYGYYVFPLLEGDRLIGRIDMKADRRGGSLDVRRLWLERGVRASSGRMEKLMAELDRVARFAGVEKVKLLESWNAALS
>Mature_398_residues
TIRLSNRDARRIFLAKQGLSAAPHRALGKDGLLQLIHEIGFVQVDSIATVERAHHQILFSRNQTYRREHLAELLEKDGEL
FEHWTHDASIIPSTFFVYWKHRFKWESETLRERWRKWRGDGFDASCDETYERIAANGAVMSRDLKEEGHQSGGWWNWHPS
KTALEVLWRQGKLAIARRENFQKVYDLTERVIPVRHYEGEVAHEEFIDWACRSALERLGFATHGEIAAFWDLVSPDEAKG
WVAAHRDELCDIVIESANGGKPRPSYAFAHFPDGLGDIPEPPGRIRVLSPFDPLLRDRNRAERLFDFFYRIEVFVPEPKR
EYGYYVFPLLEGDRLIGRIDMKADRRGGSLDVRRLWLERGVRASSGRMEKLMAELDRVARFAGVEKVKLLESWNAALS

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=411, Percent_Identity=32.360097323601, Blast_Score=195, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 46365; Mature: 46234

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRLSNRDARRIFLAKQGLSAAPHRALGKDGLLQLIHEIGFVQVDSIATVERAHHQILF
CEEEECCCCHHEEEEECCCCCCCCCHHCCHHHHHHHHHHCCCEEECHHHHHHHHHHHHHH
SRNQTYRREHLAELLEKDGELFEHWTHDASIIPSTFFVYWKHRFKWESETLRERWRKWRG
HCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCHHHHEEHHHHCCCCHHHHHHHHHHHCC
DGFDASCDETYERIAANGAVMSRDLKEEGHQSGGWWNWHPSKTALEVLWRQGKLAIARRE
CCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHCCCEEEHHHH
NFQKVYDLTERVIPVRHYEGEVAHEEFIDWACRSALERLGFATHGEIAAFWDLVSPDEAK
HHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC
GWVAAHRDELCDIVIESANGGKPRPSYAFAHFPDGLGDIPEPPGRIRVLSPFDPLLRDRN
CHHHHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCHHHHCCH
RAERLFDFFYRIEVFVPEPKREYGYYVFPLLEGDRLIGRIDMKADRRGGSLDVRRLWLER
HHHHHHHHHHHEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHC
GVRASSGRMEKLMAELDRVARFAGVEKVKLLESWNAALS
CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIRLSNRDARRIFLAKQGLSAAPHRALGKDGLLQLIHEIGFVQVDSIATVERAHHQILF
EEEECCCCHHEEEEECCCCCCCCCHHCCHHHHHHHHHHCCCEEECHHHHHHHHHHHHHH
SRNQTYRREHLAELLEKDGELFEHWTHDASIIPSTFFVYWKHRFKWESETLRERWRKWRG
HCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCHHHHEEHHHHCCCCHHHHHHHHHHHCC
DGFDASCDETYERIAANGAVMSRDLKEEGHQSGGWWNWHPSKTALEVLWRQGKLAIARRE
CCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHCCCEEEHHHH
NFQKVYDLTERVIPVRHYEGEVAHEEFIDWACRSALERLGFATHGEIAAFWDLVSPDEAK
HHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCC
GWVAAHRDELCDIVIESANGGKPRPSYAFAHFPDGLGDIPEPPGRIRVLSPFDPLLRDRN
CHHHHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCHHHHCCH
RAERLFDFFYRIEVFVPEPKREYGYYVFPLLEGDRLIGRIDMKADRRGGSLDVRRLWLER
HHHHHHHHHHHEEEEECCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHC
GVRASSGRMEKLMAELDRVARFAGVEKVKLLESWNAALS
CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]