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The map label for this gene is ybgC [C]

Identifier: 150395722

GI number: 150395722

Start: 541675

End: 542076

Strand: Direct

Name: ybgC [C]

Synonym: Smed_0498

Alternate gene names: 150395722

Gene position: 541675-542076 (Clockwise)

Preceding gene: 150395714

Following gene: 150395728

Centisome position: 14.32

GC content: 62.19

Gene sequence:

>402_bases
ATGGATGGCATAGAGCGGGAAAATGTCACGGAGATCCGCATTCCGTTCCGCGATATAGACATGCATGGTCACATGCACAA
TGCAGCCTATTATGCGCATGCCGAAGCGGCGCTCGCCAATCTCTGGCGGCACCGGCCGGCAGTCGCTGAGGAACCGGCCT
ATCTCGTCCGCCGCTCCGCCTGCATCTTTCACCGCGGCCTGCGTTTCGATGAGCCTGCACGCTTCACCGTTACCGTCGCG
AAAATCGGCGGCAGCTCGGTAGGTTTCGCTGTGCGCGTCGAGACCGGCGACAAGCTTTCGGCGGAGGTCGAGATCGTTTG
GGTGGCGGTCGATCGTGCCCGCCATCAACCGGTACAACTGCCGGCGCCAACTCGGGAATGGCTCGCCGGCTACAGCGTCT
GA

Upstream 100 bases:

>100_bases
GCCCGCACGCGGAGCAGCGCGAGGTGCTTCCACGAGTTCGATGACTTGTTCGGGTTCGCCAAACTGTCTAACGAGAGTGG
AGCGCATCAGGGAGCCTCGC

Downstream 100 bases:

>100_bases
TCCGGCCTGTAGCTGCGGAAGTGCGCGACGATCCCCATGCCGCCACCGATACCCATCACCGCAAGCCCCTCCGTGCGGGA
TGACGTCGTCAGCATCTGCG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase Superfamily Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MDGIERENVTEIRIPFRDIDMHGHMHNAAYYAHAEAALANLWRHRPAVAEEPAYLVRRSACIFHRGLRFDEPARFTVTVA
KIGGSSVGFAVRVETGDKLSAEVEIVWVAVDRARHQPVQLPAPTREWLAGYSV

Sequences:

>Translated_133_residues
MDGIERENVTEIRIPFRDIDMHGHMHNAAYYAHAEAALANLWRHRPAVAEEPAYLVRRSACIFHRGLRFDEPARFTVTVA
KIGGSSVGFAVRVETGDKLSAEVEIVWVAVDRARHQPVQLPAPTREWLAGYSV
>Mature_133_residues
MDGIERENVTEIRIPFRDIDMHGHMHNAAYYAHAEAALANLWRHRPAVAEEPAYLVRRSACIFHRGLRFDEPARFTVTVA
KIGGSSVGFAVRVETGDKLSAEVEIVWVAVDRARHQPVQLPAPTREWLAGYSV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14974; Mature: 14974

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGIERENVTEIRIPFRDIDMHGHMHNAAYYAHAEAALANLWRHRPAVAEEPAYLVRRSA
CCCCCCCCEEEEEECEEECCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
CIFHRGLRFDEPARFTVTVAKIGGSSVGFAVRVETGDKLSAEVEIVWVAVDRARHQPVQL
HHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCEEC
PAPTREWLAGYSV
CCCCHHHHCCCCC
>Mature Secondary Structure
MDGIERENVTEIRIPFRDIDMHGHMHNAAYYAHAEAALANLWRHRPAVAEEPAYLVRRSA
CCCCCCCCEEEEEECEEECCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
CIFHRGLRFDEPARFTVTVAKIGGSSVGFAVRVETGDKLSAEVEIVWVAVDRARHQPVQL
HHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCEEC
PAPTREWLAGYSV
CCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA