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The map label for this gene is 150395694

Identifier: 150395694

GI number: 150395694

Start: 506391

End: 506816

Strand: Direct

Name: 150395694

Synonym: Smed_0469

Alternate gene names: NA

Gene position: 506391-506816 (Clockwise)

Preceding gene: 150395693

Following gene: 150395700

Centisome position: 13.39

GC content: 61.97

Gene sequence:

>426_bases
GTGATCGTTCTCGATACCAACGTGATCTCCGAACTGTGGAGGATCGAGCCGGATTCCAACGTGCTGACCTGGATCGACGC
GCAGATGGTGGAAACCCTCTACCTGTCCACGATCACGGTAGCCGAACTGCGCTTCGGTTTAGCGGCCATGCCCGCAGGCA
CGCGTCGAACGATCTATTTGGATCGGTTGGAGCGAGAGGTCTTGCCGGCCTTTTCCGGGCGTGTCCTGCCCTTCGATCTG
GGCGCCTCACAGGCCTATGCTAACCTGATGGCGCGGGTGAAAATGGCTGGCAGGGGCATCGGAAAGGCGGACGGCTACAT
CGCCGCGACGGCGGCATCACGCGGCCTGATGGTTGCCACTCGAGATGTCAGTCCATTCGAGGCGGCAGGACTGACCGTCC
TTAACCCCTGGCGCGCCGCGCGATGA

Upstream 100 bases:

>100_bases
TGACGTCAATTGCGCGCGAAGCGGGGGGGCTGACCGACTCCGAAGCCGAGGGCTTCAATCAGCTTCGCGACAAGACCCCG
GCCGAGCCGATGGGCTTTGA

Downstream 100 bases:

>100_bases
TGGCGGCAGGTGTGCCGACACCGGGTCGCGAAATCGGAGTGTCGCTCTAAAGATTACGCCCCTGCTTCTCTCAGGGGCGC
AATCTCTCGCTATTGCAGCG

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIVLDTNVISELWRIEPDSNVLTWIDAQMVETLYLSTITVAELRFGLAAMPAGTRRTIYLDRLEREVLPAFSGRVLPFDL
GASQAYANLMARVKMAGRGIGKADGYIAATAASRGLMVATRDVSPFEAAGLTVLNPWRAAR

Sequences:

>Translated_141_residues
MIVLDTNVISELWRIEPDSNVLTWIDAQMVETLYLSTITVAELRFGLAAMPAGTRRTIYLDRLEREVLPAFSGRVLPFDL
GASQAYANLMARVKMAGRGIGKADGYIAATAASRGLMVATRDVSPFEAAGLTVLNPWRAAR
>Mature_141_residues
MIVLDTNVISELWRIEPDSNVLTWIDAQMVETLYLSTITVAELRFGLAAMPAGTRRTIYLDRLEREVLPAFSGRVLPFDL
GASQAYANLMARVKMAGRGIGKADGYIAATAASRGLMVATRDVSPFEAAGLTVLNPWRAAR

Specific function: Involved in plasmid stability (Potential) [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15387; Mature: 15387

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLDTNVISELWRIEPDSNVLTWIDAQMVETLYLSTITVAELRFGLAAMPAGTRRTIYL
CEEECHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEH
DRLEREVLPAFSGRVLPFDLGASQAYANLMARVKMAGRGIGKADGYIAATAASRGLMVAT
HHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEE
RDVSPFEAAGLTVLNPWRAAR
CCCCCHHHCCEEEECCCCCCC
>Mature Secondary Structure
MIVLDTNVISELWRIEPDSNVLTWIDAQMVETLYLSTITVAELRFGLAAMPAGTRRTIYL
CEEECHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEH
DRLEREVLPAFSGRVLPFDLGASQAYANLMARVKMAGRGIGKADGYIAATAASRGLMVAT
HHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEE
RDVSPFEAAGLTVLNPWRAAR
CCCCCHHHCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]