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The map label for this gene is nagD [C]

Identifier: 150395635

GI number: 150395635

Start: 440876

End: 441724

Strand: Direct

Name: nagD [C]

Synonym: Smed_0410

Alternate gene names: 150395635

Gene position: 440876-441724 (Clockwise)

Preceding gene: 150395632

Following gene: 150395636

Centisome position: 11.66

GC content: 61.6

Gene sequence:

>849_bases
ATGGCCATCAGGATCAACAGTTTTCGGGAAATCGCCGGCCGTTACGACGTGGTCCTTTGCGATGTCTGGGGCGTGCTTCA
CAATGGCATTCAAGCCTTTGCATCCGCCTGTGAAGCGCTTGCCGAGGCGCGCGCCCAAGGGCTGACCGTCGTTCTCGTCA
CCAATTCGCCCCGGCCGCATCCAGGCGTCACGGTGCAGATTCGCGGCCTTGGAGTTCCGGACGAAGCCTATCACCGTATC
GTCACCTCGGGCGATGTGACGCGCGCGTTGATCGCCAAGGCCGAGAAACGCATCTTCTTCATCGGTGCCGATCGTGATCT
GCCGCTGCTCGAAGGGCTCGGCACCGAGATCGTCTCCGCCGACGAAGCCGAGACGATCGTCTGCGCCGGCTTCTACGATG
ACGAGACCGAGACGCCCGAGCACTACCGGGCAACGCTGACGGCACTTGCCAATCGGAACGTTCCGTTCATCTGCGCCAAT
CCCGATCTCGTTGTCGAGCGCGGGCATCGCTTGATCCCCTGCGCCGGCGCCATTGCCAAGCTTTATGAAGAGCTCGGCGG
CGAGGCCCGGATCGCCGGAAAACCCTATATCTCCATCTATCGCACCGCTCTTTCCGAGGCGAAGGCGGTCAGGGGCGCGT
TCGACCTTTCGCGCGTCGTTGCCATAGGCGACGGCATGCCCACGGATGTGAAAGGTGCGCAGGATGCAGGCTTCGATCTG
CTCTATATCAGCGCGGGCATACATGCGCAGGATTATATGCACGAAAGCCGCACCGACGAAGCCAAGCTGATGGCCTTTCT
CAGACAGAACGGGGCAACGCCGAAATGGTGGATGCCGCGGCTGGCATGA

Upstream 100 bases:

>100_bases
GAATTCCATTGGAAGGGCAGCGTTTTTCTCTCCGCGAGGCTTGTAATCTTGCTCCTTCCTTGCGATGTCAGCCGGAAAGC
CGAGTTTGCAGGAAGCCAGC

Downstream 100 bases:

>100_bases
CGGGAAGATCGGCATGACGGTTTTTCATCGCAACGAGACCCGTGATCCGCTCCCCGGCCATCTTCGCGGCGGGGTGGTCG
CCATCGGCAATTTCGACGGC

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAIRINSFREIAGRYDVVLCDVWGVLHNGIQAFASACEALAEARAQGLTVVLVTNSPRPHPGVTVQIRGLGVPDEAYHRI
VTSGDVTRALIAKAEKRIFFIGADRDLPLLEGLGTEIVSADEAETIVCAGFYDDETETPEHYRATLTALANRNVPFICAN
PDLVVERGHRLIPCAGAIAKLYEELGGEARIAGKPYISIYRTALSEAKAVRGAFDLSRVVAIGDGMPTDVKGAQDAGFDL
LYISAGIHAQDYMHESRTDEAKLMAFLRQNGATPKWWMPRLA

Sequences:

>Translated_282_residues
MAIRINSFREIAGRYDVVLCDVWGVLHNGIQAFASACEALAEARAQGLTVVLVTNSPRPHPGVTVQIRGLGVPDEAYHRI
VTSGDVTRALIAKAEKRIFFIGADRDLPLLEGLGTEIVSADEAETIVCAGFYDDETETPEHYRATLTALANRNVPFICAN
PDLVVERGHRLIPCAGAIAKLYEELGGEARIAGKPYISIYRTALSEAKAVRGAFDLSRVVAIGDGMPTDVKGAQDAGFDL
LYISAGIHAQDYMHESRTDEAKLMAFLRQNGATPKWWMPRLA
>Mature_281_residues
AIRINSFREIAGRYDVVLCDVWGVLHNGIQAFASACEALAEARAQGLTVVLVTNSPRPHPGVTVQIRGLGVPDEAYHRIV
TSGDVTRALIAKAEKRIFFIGADRDLPLLEGLGTEIVSADEAETIVCAGFYDDETETPEHYRATLTALANRNVPFICANP
DLVVERGHRLIPCAGAIAKLYEELGGEARIAGKPYISIYRTALSEAKAVRGAFDLSRVVAIGDGMPTDVKGAQDAGFDLL
YISAGIHAQDYMHESRTDEAKLMAFLRQNGATPKWWMPRLA

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 30636; Mature: 30505

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRINSFREIAGRYDVVLCDVWGVLHNGIQAFASACEALAEARAQGLTVVLVTNSPRPH
CEEEECHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
PGVTVQIRGLGVPDEAYHRIVTSGDVTRALIAKAEKRIFFIGADRDLPLLEGLGTEIVSA
CCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHCCCHHCCC
DEAETIVCAGFYDDETETPEHYRATLTALANRNVPFICANPDLVVERGHRLIPCAGAIAK
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEECCCCEEEEHHHHHHH
LYEELGGEARIAGKPYISIYRTALSEAKAVRGAFDLSRVVAIGDGMPTDVKGAQDAGFDL
HHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEE
LYISAGIHAQDYMHESRTDEAKLMAFLRQNGATPKWWMPRLA
EEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AIRINSFREIAGRYDVVLCDVWGVLHNGIQAFASACEALAEARAQGLTVVLVTNSPRPH
EEEECHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
PGVTVQIRGLGVPDEAYHRIVTSGDVTRALIAKAEKRIFFIGADRDLPLLEGLGTEIVSA
CCEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHCCCHHCCC
DEAETIVCAGFYDDETETPEHYRATLTALANRNVPFICANPDLVVERGHRLIPCAGAIAK
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCEEECCCCEEEEHHHHHHH
LYEELGGEARIAGKPYISIYRTALSEAKAVRGAFDLSRVVAIGDGMPTDVKGAQDAGFDL
HHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEE
LYISAGIHAQDYMHESRTDEAKLMAFLRQNGATPKWWMPRLA
EEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]