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The map label for this gene is 150395536

Identifier: 150395536

GI number: 150395536

Start: 332417

End: 333829

Strand: Direct

Name: 150395536

Synonym: Smed_0309

Alternate gene names: NA

Gene position: 332417-333829 (Clockwise)

Preceding gene: 150395533

Following gene: 150395537

Centisome position: 8.79

GC content: 65.32

Gene sequence:

>1413_bases
ATGGCGGAGAACAAGATCTTTGCCGGGCCGCGTGTCAGACGAATTCGCAACGGCCTTCAGCTGACGCAGACGGCTATGGC
CGAGGCGCTTGGCATCTCTCCTTCCTATCTGAACCTGATCGAGCGCAACCAGCGGCCGCTGACGGTACAGCTGCTTTTGA
AGCTGGCCTCCGTTTACAGGATCGACCTCGAAGAACTTCAGGGTGAGGCGGGCAGCGGCCTTGCCGAGCTGCGCGAGGTC
TTCGCCGATCCGCTGCTTGCCGGCGAACTGCCGGGCGACCAGGAGCTGGTGGAAGTCGCCGAAGCTGCGCCGAACGTTTC
CGGGGGCATCGTCAAACTGCACCGCGCCTATCGCGAACAGGCCGCGCGTCTGAGGGATCTCGCCGCTCTGCTGGCGGATC
AGGGGCACATGGCGGCACTTGCCGACACACGACTGCCGATGGACGAAGTCCGAGAGGCCTTCGAGGCGCGTCCCAACCAC
TTCGGCCGAATCGAGGAGGCGGCGGAGGCTCTGCACGAAAGCCTTTCGCCTGGCGACGATCTTTCAGGGTCAATGAAGGC
GTGGCTCAGGAAAGAGCACGGGCTCGCAGTGCGAACGCTGCCGGTGCATGTCATGCCCACATTGCGCCGCCGATTCGACC
GCCATTCCATGCGCCTCTTCATTTCCGAACGCCTGTCTCCCTTCGACCAGCTGCGCGAGATCGCGATCGAAGTGGCTTCG
ATCGCGATCCACGAGGCGATTGCCGCCGAGCTCGAGCAGTTCCGCTTCTCCACCGCGGAGGCACGGCGCATCGGCCGTTT
CGAGCTCGCGCGCTATGCCGCTCACGCGCTGATGATGCCCTATGCGGCGTTTCTTGCCGCGGCGCAGCGGGCGAAATACG
ATGTCGGCGTACTTGCGGCACGTTTCCAGGTCTCGTTCGAGCAGGCCGCAAACCGCTTGACGATGCTGCAACGGCCAGGG
TCCGGTGGGGTCCCGTTCTTTCTCATGGAGGTCGATAGCGCCGGCAACAGGCTGCGTCGCGCGGGAGCGCAGGCCTTCCC
CCATGCCCGCTTCGGTGGCGCCTGTCCCAAGCTCAATGTCCAGGCAGCCTTCGCCGTGCCGGGTCAGCTTCTCGCCGAGC
GCGTCCAGATGCCCGAGGGCGCCGAATTCCTCGTCATTGCCCGGACTGTCGACGGACCGCAGGCCGGCTTCCACGAGCGC
GTACGACGCACGGCGATCCTCATAGGCTGCGAGGCTGCCTTCGCGAATGAAACGGTCTATGGAGCCGCCGCAGGCCTGCC
TGCGATCGCAGTCGGCCCGGCTTGCCGCCTCTGCGAGCGGCAGGGCTGTCTGGCGCGCGCCGAACCGCCGATCACACGGC
CGCTCGGCCTTGACGAAATGGCAACGGGGTTGAGCGTCTTCGACTTTCAGTAA

Upstream 100 bases:

>100_bases
GGAAAACGGGTTACCTTGTCTTGCCTTTGACAGTACTGGGAAGTAAAATTGTAAAAGATGTCAAAGCCGAATGCTCGCAG
AATATGTAAAAGGAATTACA

Downstream 100 bases:

>100_bases
GCAGGTCCGGAAGCGGATAATGAAAGTGCGCGCGTTTTCCGCCGGCATCCCTCTCTAGCTCCTTGAGCTTATCGAGAAAG
ATGCCTAACCTCGACACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MAENKIFAGPRVRRIRNGLQLTQTAMAEALGISPSYLNLIERNQRPLTVQLLLKLASVYRIDLEELQGEAGSGLAELREV
FADPLLAGELPGDQELVEVAEAAPNVSGGIVKLHRAYREQAARLRDLAALLADQGHMAALADTRLPMDEVREAFEARPNH
FGRIEEAAEALHESLSPGDDLSGSMKAWLRKEHGLAVRTLPVHVMPTLRRRFDRHSMRLFISERLSPFDQLREIAIEVAS
IAIHEAIAAELEQFRFSTAEARRIGRFELARYAAHALMMPYAAFLAAAQRAKYDVGVLAARFQVSFEQAANRLTMLQRPG
SGGVPFFLMEVDSAGNRLRRAGAQAFPHARFGGACPKLNVQAAFAVPGQLLAERVQMPEGAEFLVIARTVDGPQAGFHER
VRRTAILIGCEAAFANETVYGAAAGLPAIAVGPACRLCERQGCLARAEPPITRPLGLDEMATGLSVFDFQ

Sequences:

>Translated_470_residues
MAENKIFAGPRVRRIRNGLQLTQTAMAEALGISPSYLNLIERNQRPLTVQLLLKLASVYRIDLEELQGEAGSGLAELREV
FADPLLAGELPGDQELVEVAEAAPNVSGGIVKLHRAYREQAARLRDLAALLADQGHMAALADTRLPMDEVREAFEARPNH
FGRIEEAAEALHESLSPGDDLSGSMKAWLRKEHGLAVRTLPVHVMPTLRRRFDRHSMRLFISERLSPFDQLREIAIEVAS
IAIHEAIAAELEQFRFSTAEARRIGRFELARYAAHALMMPYAAFLAAAQRAKYDVGVLAARFQVSFEQAANRLTMLQRPG
SGGVPFFLMEVDSAGNRLRRAGAQAFPHARFGGACPKLNVQAAFAVPGQLLAERVQMPEGAEFLVIARTVDGPQAGFHER
VRRTAILIGCEAAFANETVYGAAAGLPAIAVGPACRLCERQGCLARAEPPITRPLGLDEMATGLSVFDFQ
>Mature_469_residues
AENKIFAGPRVRRIRNGLQLTQTAMAEALGISPSYLNLIERNQRPLTVQLLLKLASVYRIDLEELQGEAGSGLAELREVF
ADPLLAGELPGDQELVEVAEAAPNVSGGIVKLHRAYREQAARLRDLAALLADQGHMAALADTRLPMDEVREAFEARPNHF
GRIEEAAEALHESLSPGDDLSGSMKAWLRKEHGLAVRTLPVHVMPTLRRRFDRHSMRLFISERLSPFDQLREIAIEVASI
AIHEAIAAELEQFRFSTAEARRIGRFELARYAAHALMMPYAAFLAAAQRAKYDVGVLAARFQVSFEQAANRLTMLQRPGS
GGVPFFLMEVDSAGNRLRRAGAQAFPHARFGGACPKLNVQAAFAVPGQLLAERVQMPEGAEFLVIARTVDGPQAGFHERV
RRTAILIGCEAAFANETVYGAAAGLPAIAVGPACRLCERQGCLARAEPPITRPLGLDEMATGLSVFDFQ

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 51368; Mature: 51237

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENKIFAGPRVRRIRNGLQLTQTAMAEALGISPSYLNLIERNQRPLTVQLLLKLASVYR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
IDLEELQGEAGSGLAELREVFADPLLAGELPGDQELVEVAEAAPNVSGGIVKLHRAYREQ
HHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AARLRDLAALLADQGHMAALADTRLPMDEVREAFEARPNHFGRIEEAAEALHESLSPGDD
HHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
LSGSMKAWLRKEHGLAVRTLPVHVMPTLRRRFDRHSMRLFISERLSPFDQLREIAIEVAS
CCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IAIHEAIAAELEQFRFSTAEARRIGRFELARYAAHALMMPYAAFLAAAQRAKYDVGVLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RFQVSFEQAANRLTMLQRPGSGGVPFFLMEVDSAGNRLRRAGAQAFPHARFGGACPKLNV
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCC
QAAFAVPGQLLAERVQMPEGAEFLVIARTVDGPQAGFHERVRRTAILIGCEAAFANETVY
EEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHEEECCHHHCCCCHH
GAAAGLPAIAVGPACRLCERQGCLARAEPPITRPLGLDEMATGLSVFDFQ
HHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
AENKIFAGPRVRRIRNGLQLTQTAMAEALGISPSYLNLIERNQRPLTVQLLLKLASVYR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
IDLEELQGEAGSGLAELREVFADPLLAGELPGDQELVEVAEAAPNVSGGIVKLHRAYREQ
HHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AARLRDLAALLADQGHMAALADTRLPMDEVREAFEARPNHFGRIEEAAEALHESLSPGDD
HHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC
LSGSMKAWLRKEHGLAVRTLPVHVMPTLRRRFDRHSMRLFISERLSPFDQLREIAIEVAS
CCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IAIHEAIAAELEQFRFSTAEARRIGRFELARYAAHALMMPYAAFLAAAQRAKYDVGVLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RFQVSFEQAANRLTMLQRPGSGGVPFFLMEVDSAGNRLRRAGAQAFPHARFGGACPKLNV
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCC
QAAFAVPGQLLAERVQMPEGAEFLVIARTVDGPQAGFHERVRRTAILIGCEAAFANETVY
EEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHEEECCHHHCCCCHH
GAAAGLPAIAVGPACRLCERQGCLARAEPPITRPLGLDEMATGLSVFDFQ
HHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]