| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is aglG [H]
Identifier: 150395521
GI number: 150395521
Start: 312923
End: 314065
Strand: Direct
Name: aglG [H]
Synonym: Smed_0294
Alternate gene names: 150395521
Gene position: 312923-314065 (Clockwise)
Preceding gene: 150395520
Following gene: 150395522
Centisome position: 8.27
GC content: 61.77
Gene sequence:
>1143_bases ATGAATCCGTCTAGGCGTTCTCCGCTCACCTGGGCGGTGCATCTCTCCGTCCTGCTTCTGGTCCTGCTCTGGACTCTGCC GACCGCCGGTCTGCTGATTTCCTCCCTGCGCGACAAGGACCAGCTCGCCGTTTCCGGCTGGTGGACGGCCCTTTCCAGCT CGTCGCGAAACGCCGTCGCACGCGCTCCCTCGGCCGAGAGCCAGGTGGAGCGCGACGGCAAGTTCGTGATTTCCGGAAAC CTGCTGGACGGGCGGGGTGAGGTCTCCGCCTTCGGCTTTTCCAGCCGTGAACCCACCAAGTTCGAGGCGGGAGAAACGGC GGAACTCAACGACGGCGAAAGACTGACGGTTCAGGCCGACGGCAGTTTTGAAATCGTGTCGGATCAACGAATGGAAGGTT CGCGAGGACAGCGCATCTTCTATACGGCCACGACGCCGCCACGCTTCACCCTGGAAAACTACGCCGAGGTCCTGAGTGCG GCAGGGATCGGCAGATCCTTCCTGAATTCGCTGACGGTCGCCATTCCTTCGACCGTCATTCCCATCCTGATCGCCGCTTT CGCAGCCTATGCGCTGGCGTGGATGCCCTTCCCGGGGCGTGCGATCCTGCTCGCCGCCGTCGTCGGTCTTCTGGTCGTGC CGCTGCAGATGTCGCTCATCCCGCTGCTGCAGCTTTATAATGGAGTAAGCGCCTTTTTCGGTGTTCCCGCCAAGACCTAT ATGGGCATCTGGCTTGCGCATACCGGCTTCGGCCTGCCGCTCGCCATCTATCTCCTGCGCAACTACATGGCCGGCCTGCC GCGCGAGATCATGGAATCGGCGCGCGTCGACGGCGCCAGCGATTTTGAAATCTTCGTAAAAATCATTCTGCCTCTGTCTT TCCCGGCGCTCGCTTCCTTTGCGATTTTCCAGTTCCTGTGGACATGGAACGACCTGCTCGTCGCCCTCGTCTTCCTCGGC GCGGGGAACGACGAATTGGTGCTGACCGGACGCCTCGTCAATCTCCTCGGCTCACGCGGCGGCAATTGGGAAATTCTTAC CGCCTCAGCCTTCATCACCATCGTCGTTCCGCTGATCGTCTTCTTGGCCCTGCAACGCTACCTCGTGCGCGGCCTGCTGG CTGGGTCGGTCAAGGGCGGCTGA
Upstream 100 bases:
>100_bases GGTCGCGGCGCAGCCATCGCAGTGGTCATCATGATCCTGGTCGTTCCGATCATGATCTGGAACATCCGCAACGCGACCCG GGAAACGGGGGGGCACTGAG
Downstream 100 bases:
>100_bases TCCATTCGGACAAGGAAAACTGAACAGCATGACACTGAGCGAAACGACGAGCTCCCTTCTCGAGCCGGACAGGGACTGGT GGCGCGGAGCGGTAATCTAC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNPSRRSPLTWAVHLSVLLLVLLWTLPTAGLLISSLRDKDQLAVSGWWTALSSSSRNAVARAPSAESQVERDGKFVISGN LLDGRGEVSAFGFSSREPTKFEAGETAELNDGERLTVQADGSFEIVSDQRMEGSRGQRIFYTATTPPRFTLENYAEVLSA AGIGRSFLNSLTVAIPSTVIPILIAAFAAYALAWMPFPGRAILLAAVVGLLVVPLQMSLIPLLQLYNGVSAFFGVPAKTY MGIWLAHTGFGLPLAIYLLRNYMAGLPREIMESARVDGASDFEIFVKIILPLSFPALASFAIFQFLWTWNDLLVALVFLG AGNDELVLTGRLVNLLGSRGGNWEILTASAFITIVVPLIVFLALQRYLVRGLLAGSVKGG
Sequences:
>Translated_380_residues MNPSRRSPLTWAVHLSVLLLVLLWTLPTAGLLISSLRDKDQLAVSGWWTALSSSSRNAVARAPSAESQVERDGKFVISGN LLDGRGEVSAFGFSSREPTKFEAGETAELNDGERLTVQADGSFEIVSDQRMEGSRGQRIFYTATTPPRFTLENYAEVLSA AGIGRSFLNSLTVAIPSTVIPILIAAFAAYALAWMPFPGRAILLAAVVGLLVVPLQMSLIPLLQLYNGVSAFFGVPAKTY MGIWLAHTGFGLPLAIYLLRNYMAGLPREIMESARVDGASDFEIFVKIILPLSFPALASFAIFQFLWTWNDLLVALVFLG AGNDELVLTGRLVNLLGSRGGNWEILTASAFITIVVPLIVFLALQRYLVRGLLAGSVKGG >Mature_380_residues MNPSRRSPLTWAVHLSVLLLVLLWTLPTAGLLISSLRDKDQLAVSGWWTALSSSSRNAVARAPSAESQVERDGKFVISGN LLDGRGEVSAFGFSSREPTKFEAGETAELNDGERLTVQADGSFEIVSDQRMEGSRGQRIFYTATTPPRFTLENYAEVLSA AGIGRSFLNSLTVAIPSTVIPILIAAFAAYALAWMPFPGRAILLAAVVGLLVVPLQMSLIPLLQLYNGVSAFFGVPAKTY MGIWLAHTGFGLPLAIYLLRNYMAGLPREIMESARVDGASDFEIFVKIILPLSFPALASFAIFQFLWTWNDLLVALVFLG AGNDELVLTGRLVNLLGSRGGNWEILTASAFITIVVPLIVFLALQRYLVRGLLAGSVKGG
Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789860, Length=228, Percent_Identity=27.6315789473684, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1790464, Length=212, Percent_Identity=31.6037735849057, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1787571, Length=237, Percent_Identity=28.2700421940928, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 41066; Mature: 41066
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSRRSPLTWAVHLSVLLLVLLWTLPTAGLLISSLRDKDQLAVSGWWTALSSSSRNAVA CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHC RAPSAESQVERDGKFVISGNLLDGRGEVSAFGFSSREPTKFEAGETAELNDGERLTVQAD CCCCCHHHHHCCCCEEEECCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEC GSFEIVSDQRMEGSRGQRIFYTATTPPRFTLENYAEVLSAAGIGRSFLNSLTVAIPSTVI CCEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH PILIAAFAAYALAWMPFPGRAILLAAVVGLLVVPLQMSLIPLLQLYNGVSAFFGVPAKTY HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MGIWLAHTGFGLPLAIYLLRNYMAGLPREIMESARVDGASDFEIFVKIILPLSFPALASF HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH AIFQFLWTWNDLLVALVFLGAGNDELVLTGRLVNLLGSRGGNWEILTASAFITIVVPLIV HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH FLALQRYLVRGLLAGSVKGG HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNPSRRSPLTWAVHLSVLLLVLLWTLPTAGLLISSLRDKDQLAVSGWWTALSSSSRNAVA CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCHHC RAPSAESQVERDGKFVISGNLLDGRGEVSAFGFSSREPTKFEAGETAELNDGERLTVQAD CCCCCHHHHHCCCCEEEECCEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEC GSFEIVSDQRMEGSRGQRIFYTATTPPRFTLENYAEVLSAAGIGRSFLNSLTVAIPSTVI CCEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH PILIAAFAAYALAWMPFPGRAILLAAVVGLLVVPLQMSLIPLLQLYNGVSAFFGVPAKTY HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH MGIWLAHTGFGLPLAIYLLRNYMAGLPREIMESARVDGASDFEIFVKIILPLSFPALASF HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHH AIFQFLWTWNDLLVALVFLGAGNDELVLTGRLVNLLGSRGGNWEILTASAFITIVVPLIV HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH FLALQRYLVRGLLAGSVKGG HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]