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The map label for this gene is 150395501

Identifier: 150395501

GI number: 150395501

Start: 294803

End: 295327

Strand: Direct

Name: 150395501

Synonym: Smed_0274

Alternate gene names: NA

Gene position: 294803-295327 (Clockwise)

Preceding gene: 150395500

Following gene: 150395502

Centisome position: 7.8

GC content: 60.38

Gene sequence:

>525_bases
GTGCTGGCCACGTCTACATGTAGCGCCTTTGCGAGTGCGGGGGTCTGTGAGCGCGAGATCGCGTCCGCCGCCGCCAAATA
CGGCGTTCCGACAGGGATACTCTATTCCGTCGGATTGACCGAGACGGGGCGCAAAGGGTCCCTGCAGCCCTATGCGATGA
ACATCGAAGGCAAGGCCTTTTTCGGAGCCAGTGCCGAGGATGTTCTCACGCGTTTCGGGGTCGCGCGCGCCGAGGGCGCC
AAGCTCATTGATCTCGGCTGCATGCAGATCAATTATCACTTCCACGGCGAGCATTTCAGCTCCCCGGCGGAGATGCTCGA
TCCGCGCAAGAACGTCGAATATGCGGCACGTTTTCTGTCCGACCTCCACGCCAGGCACGAGACCTGGACGATGGCCGTCG
CCCGCTATCATGCCGGACCGAATAACGATCCGGCGCAGAAGAAATATGTCTGCCGCGTCATCGCAAACCTCGTCGCAACC
GGCTATGGCAAGTGGACGCCGAACGCGCAGAGCTTTTGTCAATAA

Upstream 100 bases:

>100_bases
AGCCAGGGGCGCCAGCCACGCGACGGCGGTCGGGCGGCGGCGGAAAGGTGGGCGGGCAATGATGGAACGGACGATGTGCC
TGATGCTGCCGGGCGTTCTC

Downstream 100 bases:

>100_bases
TCAATCCCAGATTGCAGAACAGAGGGCAAAGCCGCATTGTGGCGACAATGCGGACAGAATGTGATCGCAAGCGATTTCAT
CGCGCGGCGTTAACTTTTCA

Product: lytic transglycosylase

Products: NA

Alternate protein names: Transglycosylase Slt Family; Transglycosylase; Soluble Lytic Murein Transglycosylase; Slt Family Transglycosylase; Signal Peptide; Transglycosylase SLT Domain; Transglycosylase SLT Domain-Containing; Transglycosylase SLT Domain-Containing Protein; Lytic Transglycosylase; VirB1 Protein; Lytic Murein Transglycosylase Family Protein

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MLATSTCSAFASAGVCEREIASAAAKYGVPTGILYSVGLTETGRKGSLQPYAMNIEGKAFFGASAEDVLTRFGVARAEGA
KLIDLGCMQINYHFHGEHFSSPAEMLDPRKNVEYAARFLSDLHARHETWTMAVARYHAGPNNDPAQKKYVCRVIANLVAT
GYGKWTPNAQSFCQ

Sequences:

>Translated_174_residues
MLATSTCSAFASAGVCEREIASAAAKYGVPTGILYSVGLTETGRKGSLQPYAMNIEGKAFFGASAEDVLTRFGVARAEGA
KLIDLGCMQINYHFHGEHFSSPAEMLDPRKNVEYAARFLSDLHARHETWTMAVARYHAGPNNDPAQKKYVCRVIANLVAT
GYGKWTPNAQSFCQ
>Mature_174_residues
MLATSTCSAFASAGVCEREIASAAAKYGVPTGILYSVGLTETGRKGSLQPYAMNIEGKAFFGASAEDVLTRFGVARAEGA
KLIDLGCMQINYHFHGEHFSSPAEMLDPRKNVEYAARFLSDLHARHETWTMAVARYHAGPNNDPAQKKYVCRVIANLVAT
GYGKWTPNAQSFCQ

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18873; Mature: 18873

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATSTCSAFASAGVCEREIASAAAKYGVPTGILYSVGLTETGRKGSLQPYAMNIEGKAF
CCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEECCCCEE
FGASAEDVLTRFGVARAEGAKLIDLGCMQINYHFHGEHFSSPAEMLDPRKNVEYAARFLS
ECCCHHHHHHHHCCHHCCCCEEEEEEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHH
DLHARHETWTMAVARYHAGPNNDPAQKKYVCRVIANLVATGYGKWTPNAQSFCQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure
MLATSTCSAFASAGVCEREIASAAAKYGVPTGILYSVGLTETGRKGSLQPYAMNIEGKAF
CCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEECCCCEE
FGASAEDVLTRFGVARAEGAKLIDLGCMQINYHFHGEHFSSPAEMLDPRKNVEYAARFLS
ECCCHHHHHHHHCCHHCCCCEEEEEEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHH
DLHARHETWTMAVARYHAGPNNDPAQKKYVCRVIANLVATGYGKWTPNAQSFCQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA