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The map label for this gene is motD [H]

Identifier: 150395500

GI number: 150395500

Start: 293410

End: 294825

Strand: Direct

Name: motD [H]

Synonym: Smed_0273

Alternate gene names: 150395500

Gene position: 293410-294825 (Clockwise)

Preceding gene: 150395499

Following gene: 150395501

Centisome position: 7.76

GC content: 66.81

Gene sequence:

>1416_bases
ATGAGACCTCTTGACGAGAGTTTGCGTGCGCCCGTCGCCAGCAGGCCGGCGCTTTCCCCGGGAAGTCGCGATCAGGCGGA
GCCATCGCCCGGTGCCTTTGGCGAGGCGATCGCCGACGCGGGCCGTCGGAGGGCGCAGGGCCAGGGCGATTCGCAATCCC
ATGGCCTGCAACAGATCATAACTGCGAAAGACGGCCGGCCATCGGTTCAATCGACGGTGGACGGATTTGGCGAGAACGAT
CCGGCGCCTCTGACGAATATCGCATCGCCGGACGGTGGTCTCGCGCCCCGACGCGCGAACACCACGCGGGACGTGGCGGT
AAAACCGTTGCCGCAAGACCCTCTCGCGGACACGCCGCGCCAGTCGTCGGAAGGGGAGGACGTCGCCGTGCCGGCGCATC
GGGCGGCGGGTCGCGGACGCGATGCGGTGCGGACTTCGGCCGATGCCTCGGACGAAGCGTCGGGAGTGGCCGCAACGGCG
GGTGGCAAAACCGGAGAGCCTGCCGGCGAAACCGTCTCCGATCTCCTGTCGATGCTCGCAGGTGCACCACCCGTTGCGGC
TGCCGGTCCCCATCCGGAGGGTAAGACAAGGCCCGCCTCGGCCGCTCGCGATGGCGTGGACAGTCCGACGAGGACGGCCG
ATGGGCGGTCGCTCGAAACTGCCGACGGTGAGCATATGACGAACGGAGAGGTGACCGGCGAAAGCGAGCCGGACCGGCTT
TTCCGCTTCGCCCGCGCCGACGGCAGGGGACAGGCCGTTTCGATGAGTGTTTCGCCAGATGGCGAGCGGGCGACCGTGGA
GAACGGGCGATCGTCAGTCGGCTCAAGGGCGGAAGCTGTGACGGTTCTGGAGGCGCGCCGCTATCTCGGGCTTGCCGTGA
ACGAGAACGCCAGTTCCGTGACCAGCGCGATCGCCGGCGATAGCGGCTGGGCCGAGGCGCTGCAGTCCGGCTCTGCGATG
CCGAAACCCGAAGCCTGGAGCCAGGCGGGCAAGACGCTCAACACGCTGAAGATCCAGATGCACCCGGTCGATCTCGGCAT
GGTGACGGCGACGCTGAGGCTGAAGGACGACGAGCTGCAGGTCGATCTGAAGGTGGAAACGGGCGAGGCCTTCCGCCAGT
TGCGCGACGACCAGAGCGAAATGGTGAAAACCCTGCGGGCGCAAGGATTTACGGTCGATCAGGTGAACATCGTTTTCAAT
GGAGGCGGAGATAACACAAGCAATGGCGGCGGACAGTCGCAGGCTCAGGCACAGTTTGGTCAGGAGGGGCGTGAGCGGGC
AGGGGAAGAAGGAAGCCAGGGGCGCCAGCCACGCGACGGCGGTCGGGCGGCGGCGGAAAGGTGGGCGGGCAATGATGGAA
CGGACGATGTGCCTGATGCTGCCGGGCGTTCTCGTGCTGGCCACGTCTACATGTAG

Upstream 100 bases:

>100_bases
AAGCCGATGCCGCCTCAGGCGATCCGGCGATCGACGGCTTTCTTGCCAGCGGTCGTTCTAAAATCGAGGAGATCGATGCG
CTGCTGAAGGGGGAAGGACA

Downstream 100 bases:

>100_bases
CGCCTTTGCGAGTGCGGGGGTCTGTGAGCGCGAGATCGCGTCCGCCGCCGCCAAATACGGCGTTCCGACAGGGATACTCT
ATTCCGTCGGATTGACCGAG

Product: motility protein D

Products: NA

Alternate protein names: Motility protein D [H]

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MRPLDESLRAPVASRPALSPGSRDQAEPSPGAFGEAIADAGRRRAQGQGDSQSHGLQQIITAKDGRPSVQSTVDGFGEND
PAPLTNIASPDGGLAPRRANTTRDVAVKPLPQDPLADTPRQSSEGEDVAVPAHRAAGRGRDAVRTSADASDEASGVAATA
GGKTGEPAGETVSDLLSMLAGAPPVAAAGPHPEGKTRPASAARDGVDSPTRTADGRSLETADGEHMTNGEVTGESEPDRL
FRFARADGRGQAVSMSVSPDGERATVENGRSSVGSRAEAVTVLEARRYLGLAVNENASSVTSAIAGDSGWAEALQSGSAM
PKPEAWSQAGKTLNTLKIQMHPVDLGMVTATLRLKDDELQVDLKVETGEAFRQLRDDQSEMVKTLRAQGFTVDQVNIVFN
GGGDNTSNGGGQSQAQAQFGQEGRERAGEEGSQGRQPRDGGRAAAERWAGNDGTDDVPDAAGRSRAGHVYM

Sequences:

>Translated_471_residues
MRPLDESLRAPVASRPALSPGSRDQAEPSPGAFGEAIADAGRRRAQGQGDSQSHGLQQIITAKDGRPSVQSTVDGFGEND
PAPLTNIASPDGGLAPRRANTTRDVAVKPLPQDPLADTPRQSSEGEDVAVPAHRAAGRGRDAVRTSADASDEASGVAATA
GGKTGEPAGETVSDLLSMLAGAPPVAAAGPHPEGKTRPASAARDGVDSPTRTADGRSLETADGEHMTNGEVTGESEPDRL
FRFARADGRGQAVSMSVSPDGERATVENGRSSVGSRAEAVTVLEARRYLGLAVNENASSVTSAIAGDSGWAEALQSGSAM
PKPEAWSQAGKTLNTLKIQMHPVDLGMVTATLRLKDDELQVDLKVETGEAFRQLRDDQSEMVKTLRAQGFTVDQVNIVFN
GGGDNTSNGGGQSQAQAQFGQEGRERAGEEGSQGRQPRDGGRAAAERWAGNDGTDDVPDAAGRSRAGHVYM
>Mature_471_residues
MRPLDESLRAPVASRPALSPGSRDQAEPSPGAFGEAIADAGRRRAQGQGDSQSHGLQQIITAKDGRPSVQSTVDGFGEND
PAPLTNIASPDGGLAPRRANTTRDVAVKPLPQDPLADTPRQSSEGEDVAVPAHRAAGRGRDAVRTSADASDEASGVAATA
GGKTGEPAGETVSDLLSMLAGAPPVAAAGPHPEGKTRPASAARDGVDSPTRTADGRSLETADGEHMTNGEVTGESEPDRL
FRFARADGRGQAVSMSVSPDGERATVENGRSSVGSRAEAVTVLEARRYLGLAVNENASSVTSAIAGDSGWAEALQSGSAM
PKPEAWSQAGKTLNTLKIQMHPVDLGMVTATLRLKDDELQVDLKVETGEAFRQLRDDQSEMVKTLRAQGFTVDQVNIVFN
GGGDNTSNGGGQSQAQAQFGQEGRERAGEEGSQGRQPRDGGRAAAERWAGNDGTDDVPDAAGRSRAGHVYM

Specific function: Required for the rotation of the flagellar motor. Has a positive effect as flagellar rotation increases when an excess of motd is present [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm. Note=Associated with the inner surface of the motor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021136 [H]

Pfam domain/function: PF02120 Flg_hook [H]

EC number: NA

Molecular weight: Translated: 48736; Mature: 48736

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLDESLRAPVASRPALSPGSRDQAEPSPGAFGEAIADAGRRRAQGQGDSQSHGLQQII
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
TAKDGRPSVQSTVDGFGENDPAPLTNIASPDGGLAPRRANTTRDVAVKPLPQDPLADTPR
HCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
QSSEGEDVAVPAHRAAGRGRDAVRTSADASDEASGVAATAGGKTGEPAGETVSDLLSMLA
CCCCCCCEECCCHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
GAPPVAAAGPHPEGKTRPASAARDGVDSPTRTADGRSLETADGEHMTNGEVTGESEPDRL
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH
FRFARADGRGQAVSMSVSPDGERATVENGRSSVGSRAEAVTVLEARRYLGLAVNENASSV
HHHHHCCCCCCEEEEEECCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHHCEEECCCHHHH
TSAIAGDSGWAEALQSGSAMPKPEAWSQAGKTLNTLKIQMHPVDLGMVTATLRLKDDELQ
HHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCEEEEEEEEEEEECCEEEEEEEEEECCCEE
VDLKVETGEAFRQLRDDQSEMVKTLRAQGFTVDQVNIVFNGGGDNTSNGGGQSQAQAQFG
EEEEECCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH
QEGRERAGEEGSQGRQPRDGGRAAAERWAGNDGTDDVPDAAGRSRAGHVYM
HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPLDESLRAPVASRPALSPGSRDQAEPSPGAFGEAIADAGRRRAQGQGDSQSHGLQQII
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
TAKDGRPSVQSTVDGFGENDPAPLTNIASPDGGLAPRRANTTRDVAVKPLPQDPLADTPR
HCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
QSSEGEDVAVPAHRAAGRGRDAVRTSADASDEASGVAATAGGKTGEPAGETVSDLLSMLA
CCCCCCCEECCCHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
GAPPVAAAGPHPEGKTRPASAARDGVDSPTRTADGRSLETADGEHMTNGEVTGESEPDRL
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHH
FRFARADGRGQAVSMSVSPDGERATVENGRSSVGSRAEAVTVLEARRYLGLAVNENASSV
HHHHHCCCCCCEEEEEECCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHHCEEECCCHHHH
TSAIAGDSGWAEALQSGSAMPKPEAWSQAGKTLNTLKIQMHPVDLGMVTATLRLKDDELQ
HHHHCCCHHHHHHHHCCCCCCCCHHHHHHCCEEEEEEEEEEEECCEEEEEEEEEECCCEE
VDLKVETGEAFRQLRDDQSEMVKTLRAQGFTVDQVNIVFNGGGDNTSNGGGQSQAQAQFG
EEEEECCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHH
QEGRERAGEEGSQGRQPRDGGRAAAERWAGNDGTDDVPDAAGRSRAGHVYM
HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335288 [H]