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The map label for this gene is yhdE [C]

Identifier: 150395439

GI number: 150395439

Start: 237816

End: 238481

Strand: Direct

Name: yhdE [C]

Synonym: Smed_0212

Alternate gene names: 150395439

Gene position: 237816-238481 (Clockwise)

Preceding gene: 150395438

Following gene: 150395440

Centisome position: 6.29

GC content: 63.21

Gene sequence:

>666_bases
ATGCATGACATTGGCGCAAACCTCCGGGAACCACGGCTCGCATCGATGGCAGTGACCAAGAAACTGATACTGGCGTCCGG
ATCGCCGCGTCGCGTCGAGCTCCTGGCGCAGTCGGGGATCGAGCCCGCGCGCCTGATGCCCATGGACCTCGACGAAACGC
CGAAGCGCTCGGAGCATCCGCGGTCGCTCGCCCGCAGGCTGTCCGCCGAAAAGGCGAAGGCTGCGCTTTCCGCCATCACT
GGCGATCCTGCCTGGGAAGGCAGCTACATTCTCGCAGCCGACACCGTCGTGTGCGTCGGCCGCCGGATTTTGCCGAAGCC
GGAACTGGTGAGCGAGGCATCGGCCGCATTGCACCTTCTCTCGGGCCGCAGCCATCGCGTCTATACGGGCATCTGCCTCG
TCACGCCCGACCGCACGCTTCGTCAGAAGGTGATCGACACCAAGGTGCGCTTCAAGCGGCTTTCCACGATGGATATCGAG
AGCTATCTCGCGTCCGGCCAATGGCGCGGCAAGGCCGGGGCTTACGGCATCCAGGGCATTGCCGGAAGCTTCGTCGTGAA
GCTGGTCGGCTCTTACACCAATGTGGTAGGCTTGCCGCTTTATGAGACTGTCAATCTCCTGGTCGGCGAAGGATACGACG
TGCACGATCGTTGGCTGGAAGGCTGA

Upstream 100 bases:

>100_bases
CGCCCTACGATCTGACCAAGGGCCGTATCACCTACCGCTTCAAGTAGGCCCCGGCCAATTGCACGTCGCCCAGAAGTGCA
AAGCCGTTTTGGGCAGCGAC

Downstream 100 bases:

>100_bases
GAAGATGCGCGGCGGAGGCAAGAAAAACGCTTCGAACGTAGAACCCTTGCGCGCAACGCGGCCCTGTGCGGAATGCGGGC
GGCCGTCCGTGCGCGAGCAT

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MHDIGANLREPRLASMAVTKKLILASGSPRRVELLAQSGIEPARLMPMDLDETPKRSEHPRSLARRLSAEKAKAALSAIT
GDPAWEGSYILAADTVVCVGRRILPKPELVSEASAALHLLSGRSHRVYTGICLVTPDRTLRQKVIDTKVRFKRLSTMDIE
SYLASGQWRGKAGAYGIQGIAGSFVVKLVGSYTNVVGLPLYETVNLLVGEGYDVHDRWLEG

Sequences:

>Translated_221_residues
MHDIGANLREPRLASMAVTKKLILASGSPRRVELLAQSGIEPARLMPMDLDETPKRSEHPRSLARRLSAEKAKAALSAIT
GDPAWEGSYILAADTVVCVGRRILPKPELVSEASAALHLLSGRSHRVYTGICLVTPDRTLRQKVIDTKVRFKRLSTMDIE
SYLASGQWRGKAGAYGIQGIAGSFVVKLVGSYTNVVGLPLYETVNLLVGEGYDVHDRWLEG
>Mature_221_residues
MHDIGANLREPRLASMAVTKKLILASGSPRRVELLAQSGIEPARLMPMDLDETPKRSEHPRSLARRLSAEKAKAALSAIT
GDPAWEGSYILAADTVVCVGRRILPKPELVSEASAALHLLSGRSHRVYTGICLVTPDRTLRQKVIDTKVRFKRLSTMDIE
SYLASGQWRGKAGAYGIQGIAGSFVVKLVGSYTNVVGLPLYETVNLLVGEGYDVHDRWLEG

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=198, Percent_Identity=34.3434343434343, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI291045183, Length=196, Percent_Identity=32.6530612244898, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI291045181, Length=126, Percent_Identity=40.4761904761905, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI310133124, Length=126, Percent_Identity=40.4761904761905, Blast_Score=83, Evalue=2e-16,
Organism=Escherichia coli, GI1789646, Length=200, Percent_Identity=41.5, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI87081830, Length=195, Percent_Identity=32.3076923076923, Blast_Score=74, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI193202443, Length=185, Percent_Identity=32.972972972973, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI78706856, Length=185, Percent_Identity=36.2162162162162, Blast_Score=94, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 24103; Mature: 24103

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDIGANLREPRLASMAVTKKLILASGSPRRVELLAQSGIEPARLMPMDLDETPKRSEHP
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCH
RSLARRLSAEKAKAALSAITGDPAWEGSYILAADTVVCVGRRILPKPELVSEASAALHLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SGRSHRVYTGICLVTPDRTLRQKVIDTKVRFKRLSTMDIESYLASGQWRGKAGAYGIQGI
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
AGSFVVKLVGSYTNVVGLPLYETVNLLVGEGYDVHDRWLEG
HHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCHHHHHCCC
>Mature Secondary Structure
MHDIGANLREPRLASMAVTKKLILASGSPRRVELLAQSGIEPARLMPMDLDETPKRSEHP
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCH
RSLARRLSAEKAKAALSAITGDPAWEGSYILAADTVVCVGRRILPKPELVSEASAALHLL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SGRSHRVYTGICLVTPDRTLRQKVIDTKVRFKRLSTMDIESYLASGQWRGKAGAYGIQGI
CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
AGSFVVKLVGSYTNVVGLPLYETVNLLVGEGYDVHDRWLEG
HHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]