| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395370
Identifier: 150395370
GI number: 150395370
Start: 155503
End: 155976
Strand: Direct
Name: 150395370
Synonym: Smed_0142
Alternate gene names: NA
Gene position: 155503-155976 (Clockwise)
Preceding gene: 150395368
Following gene: 150395374
Centisome position: 4.11
GC content: 60.76
Gene sequence:
>474_bases ATGACCGCAGCATCTGCCGACCATGCCGACTTCACGATCGAACGCGTTGTCAAAGCACCGCCGGAAAAGGTCTTCGCGGC CTTCGCCGATCCCGCGGCGCATGACCGCTGGTTCGTGAAAGCCGACAATTGGCCAGTCGCGGAATATAGCCACGACTTCC GTGTCGGCGGGCGGGAAGGCGGCCGTTTCAGCCAAGACGGGAAGACTTTCTACTTCAACGAGACGGTCTATCTCGACATC GTCGAGAACAGGAGGATCGTCTCAGCTTACACGATAGCACAAGATTACCGGCGCATCTCCGCCTCCATCGCAACCGTCGA CCTTATTCCGGAAGGCACCGGCACACGGGTCGTCTTCACCGAGCAGGCGGCGTTCCTGGATGGGCTCGATAAGGTCGAAC ATCGCCGCGAGGGCTGGGAGCAGCTGATAGGATTTCTTGCGGCCGAGCTCGGCGAACGGGCCGATCTCGCCTGA
Upstream 100 bases:
>100_bases GGAGTATCCGCTCGAAACTGCTTGCATTATCGCATCAGTGGCGCTAATGTTCAACTGCTTTCAAAATGCAAGCACTATTG CAAGTGACAGGGAGAAGATC
Downstream 100 bases:
>100_bases CAGACTTGATCCGGACCATAACGGACGGAGCAAGCTCTTTTTACTTCGGGTCGGTCCAGCTTCGGGGGCCTTCTCAAAAT CTGACTCTCAAACCTGCATT
Product: activator of Hsp90 ATPase 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTAASADHADFTIERVVKAPPEKVFAAFADPAAHDRWFVKADNWPVAEYSHDFRVGGREGGRFSQDGKTFYFNETVYLDI VENRRIVSAYTIAQDYRRISASIATVDLIPEGTGTRVVFTEQAAFLDGLDKVEHRREGWEQLIGFLAAELGERADLA
Sequences:
>Translated_157_residues MTAASADHADFTIERVVKAPPEKVFAAFADPAAHDRWFVKADNWPVAEYSHDFRVGGREGGRFSQDGKTFYFNETVYLDI VENRRIVSAYTIAQDYRRISASIATVDLIPEGTGTRVVFTEQAAFLDGLDKVEHRREGWEQLIGFLAAELGERADLA >Mature_156_residues TAASADHADFTIERVVKAPPEKVFAAFADPAAHDRWFVKADNWPVAEYSHDFRVGGREGGRFSQDGKTFYFNETVYLDIV ENRRIVSAYTIAQDYRRISASIATVDLIPEGTGTRVVFTEQAAFLDGLDKVEHRREGWEQLIGFLAAELGERADLA
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17601; Mature: 17469
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAASADHADFTIERVVKAPPEKVFAAFADPAAHDRWFVKADNWPVAEYSHDFRVGGREG CCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCCC GRFSQDGKTFYFNETVYLDIVENRRIVSAYTIAQDYRRISASIATVDLIPEGTGTRVVFT CCCCCCCCEEEECCEEEEEEECCCEEEHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEE EQAAFLDGLDKVEHRREGWEQLIGFLAAELGERADLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TAASADHADFTIERVVKAPPEKVFAAFADPAAHDRWFVKADNWPVAEYSHDFRVGGREG CCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCCC GRFSQDGKTFYFNETVYLDIVENRRIVSAYTIAQDYRRISASIATVDLIPEGTGTRVVFT CCCCCCCCEEEECCEEEEEEECCCEEEHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEE EQAAFLDGLDKVEHRREGWEQLIGFLAAELGERADLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA