| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yqgI [H]
Identifier: 150395349
GI number: 150395349
Start: 135441
End: 136763
Strand: Direct
Name: yqgI [H]
Synonym: Smed_0121
Alternate gene names: 150395349
Gene position: 135441-136763 (Clockwise)
Preceding gene: 150395348
Following gene: 150395350
Centisome position: 3.58
GC content: 60.7
Gene sequence:
>1323_bases ATGACCGAATTTGCCTCCCCGACAGCAAGGGTCTCCACCCGACCTGCTGCAAGCCGCCGCGATATCGGTATCAAGCGCCG CTATGCCGCTGAGCGCCGCTTCCGTGCCTTCGGATTCGGTGCCATCGCCATCGGCCTGTTCTTCCTCGCTGTTCTCCTCT GGAGCGTCGTTTCGAAGGGCTATACCGCCTTCCAGCAGACGACGATTACGCTTCCTATCGAGTTTTCCGAGAAGGTGATC GACCCGAAAAACGAACGGGCGACGGATCCAAAGCAACTCTTTACGGCCAATTACCCGCTCCTCGTGCGCGAGGCTCTGGT AAAGCAGCTCGGCCTCGACCAGGCGAAGCGGCCCTTGGTGAAGCAGGCGACCGATATGGTCTCCGCCAGCGCACGGTCGC AATTGCGCGACATCGTCGTCGCCGATCCCACGGTCATCGGCAAGACGATCCCCGTCACGCTGCTCGCCGACGCGAACATC GACTCCGCTTTCAAGGGTCAGATCGACCTCACCGTCGACGAAGCCAGGCGCAAGGTGAAAGACGAGCAGGTCGCATGGAT GAACACGCTTGCCGAAGAAGGCGTGCTCAAGAAGAGCTTCAACACCGGCATCTTCACCTTCGGCGCATCGAGCCGTCCCG AAGCGGCGGGCGTCGGTGTCGCCCTCCTCGGATCGCTCTACATGATGCTGATCGTGCTCGTGCTATCGTTGCCGATCGGT GTCGCCGCCTCCATTTATCTAGAGGAGTTTGCGCCGAAAAACCGGCTCACGGACCTGATCGAGGTGAATATCAACAACCT GGCGGCCGTACCGTCCATCGTCTACGGTCTCCTTGGGCTTGCCGTTTTCATCAACTTCTGGGGCATGCCACGCTCCGCGG CACTTGTCGGCGCGTTCGTGCTGACGCTGATGACGCTCCCGACGATCATCATCGCTACGCGGGCGGCTTTGAAGGCTGTG CCTCCGTCGATCCGCTCTGCGGCGCTCGGACTTGGCGCTTCGAAGATGCAGACCGTCTTCCATCATGTGCTGCCGCTTGC GATGCCCGGTATCCTGACCGGCACGATCATCGGTCTTGCCCATGCGCTCGGCGAAACGGCGCCCTTGCTTCTGATCGGAA TGGTCGCCTTTGTGGTAGACTTTCCGGGATCTCCGCTGGAGCCGTCCACGGCGCTGCCGGTGCAAATCTACATGTGGGCG AACGAGGCGGAGCGTGCCTTCGTCGAGCGTACGTCGGGAGCGATCATCATACTCTTGATCTTTCTCATCTTCATGAACCT CGGCGCAATTCTCTTGCGGCGTCGCTTTGAGCGTCGCTGGTAG
Upstream 100 bases:
>100_bases CCCTGGTCGCCTTCGCACTCGGCATCACGCTCTTCGTTATCACGCTGGGCCTCAACATCTACGCGCTCTACATCGTGCGC AAATATCGGGAACAGTACGA
Downstream 100 bases:
>100_bases TGGGGTAAGGACAATGAACATCATGTCGGAAGCTGCAGTCGAAAAGGCTCTTGACCAGAAAATGAATACGGTGCCCTTCA AGATGGTCGGCAGGGACGTG
Product: phosphate ABC transporter inner membrane subunit PstA
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTEFASPTARVSTRPAASRRDIGIKRRYAAERRFRAFGFGAIAIGLFFLAVLLWSVVSKGYTAFQQTTITLPIEFSEKVI DPKNERATDPKQLFTANYPLLVREALVKQLGLDQAKRPLVKQATDMVSASARSQLRDIVVADPTVIGKTIPVTLLADANI DSAFKGQIDLTVDEARRKVKDEQVAWMNTLAEEGVLKKSFNTGIFTFGASSRPEAAGVGVALLGSLYMMLIVLVLSLPIG VAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLAVFINFWGMPRSAALVGAFVLTLMTLPTIIIATRAALKAV PPSIRSAALGLGASKMQTVFHHVLPLAMPGILTGTIIGLAHALGETAPLLLIGMVAFVVDFPGSPLEPSTALPVQIYMWA NEAERAFVERTSGAIIILLIFLIFMNLGAILLRRRFERRW
Sequences:
>Translated_440_residues MTEFASPTARVSTRPAASRRDIGIKRRYAAERRFRAFGFGAIAIGLFFLAVLLWSVVSKGYTAFQQTTITLPIEFSEKVI DPKNERATDPKQLFTANYPLLVREALVKQLGLDQAKRPLVKQATDMVSASARSQLRDIVVADPTVIGKTIPVTLLADANI DSAFKGQIDLTVDEARRKVKDEQVAWMNTLAEEGVLKKSFNTGIFTFGASSRPEAAGVGVALLGSLYMMLIVLVLSLPIG VAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLAVFINFWGMPRSAALVGAFVLTLMTLPTIIIATRAALKAV PPSIRSAALGLGASKMQTVFHHVLPLAMPGILTGTIIGLAHALGETAPLLLIGMVAFVVDFPGSPLEPSTALPVQIYMWA NEAERAFVERTSGAIIILLIFLIFMNLGAILLRRRFERRW >Mature_439_residues TEFASPTARVSTRPAASRRDIGIKRRYAAERRFRAFGFGAIAIGLFFLAVLLWSVVSKGYTAFQQTTITLPIEFSEKVID PKNERATDPKQLFTANYPLLVREALVKQLGLDQAKRPLVKQATDMVSASARSQLRDIVVADPTVIGKTIPVTLLADANID SAFKGQIDLTVDEARRKVKDEQVAWMNTLAEEGVLKKSFNTGIFTFGASSRPEAAGVGVALLGSLYMMLIVLVLSLPIGV AASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLAVFINFWGMPRSAALVGAFVLTLMTLPTIIIATRAALKAVP PSIRSAALGLGASKMQTVFHHVLPLAMPGILTGTIIGLAHALGETAPLLLIGMVAFVVDFPGSPLEPSTALPVQIYMWAN EAERAFVERTSGAIIILLIFLIFMNLGAILLRRRFERRW
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=227, Percent_Identity=30.8370044052863, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1790164, Length=174, Percent_Identity=28.1609195402299, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005672 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 47774; Mature: 47643
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFASPTARVSTRPAASRRDIGIKRRYAAERRFRAFGFGAIAIGLFFLAVLLWSVVSKG CCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YTAFQQTTITLPIEFSEKVIDPKNERATDPKQLFTANYPLLVREALVKQLGLDQAKRPLV HHHHHHEEEEEEEECHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH KQATDMVSASARSQLRDIVVADPTVIGKTIPVTLLADANIDSAFKGQIDLTVDEARRKVK HHHHHHHHHHHHHHHHHHHEECCHHCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHH DEQVAWMNTLAEEGVLKKSFNTGIFTFGASSRPEAAGVGVALLGSLYMMLIVLVLSLPIG HHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH VAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLAVFINFWGMPRSAALVGAFV HHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LTLMTLPTIIIATRAALKAVPPSIRSAALGLGASKMQTVFHHVLPLAMPGILTGTIIGLA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALGETAPLLLIGMVAFVVDFPGSPLEPSTALPVQIYMWANEAERAFVERTSGAIIILLI HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHHH FLIFMNLGAILLRRRFERRW HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEFASPTARVSTRPAASRRDIGIKRRYAAERRFRAFGFGAIAIGLFFLAVLLWSVVSKG CCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YTAFQQTTITLPIEFSEKVIDPKNERATDPKQLFTANYPLLVREALVKQLGLDQAKRPLV HHHHHHEEEEEEEECHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH KQATDMVSASARSQLRDIVVADPTVIGKTIPVTLLADANIDSAFKGQIDLTVDEARRKVK HHHHHHHHHHHHHHHHHHHEECCHHCCCCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHH DEQVAWMNTLAEEGVLKKSFNTGIFTFGASSRPEAAGVGVALLGSLYMMLIVLVLSLPIG HHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH VAASIYLEEFAPKNRLTDLIEVNINNLAAVPSIVYGLLGLAVFINFWGMPRSAALVGAFV HHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LTLMTLPTIIIATRAALKAVPPSIRSAALGLGASKMQTVFHHVLPLAMPGILTGTIIGLA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HALGETAPLLLIGMVAFVVDFPGSPLEPSTALPVQIYMWANEAERAFVERTSGAIIILLI HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHHH FLIFMNLGAILLRRRFERRW HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]