| Definition | Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence. |
|---|---|
| Accession | NC_001988 |
| Length | 192,000 |
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Identifier: 15004714
GI number: 15004714
Start: 10015
End: 11094
Strand: Direct
Name: Not Available
Synonym: CA_P0009
Alternate gene names: 15004714
Gene position: 10015-11094 (Clockwise)
Preceding gene: 15004709
Following gene: 15004715
Centisome position: 5.22
GC content: 27.59
Gene sequence:
>1080_bases ATGGGAATGATTAGTGCAATTATAGTAGATAATGAAGTATTATCCGCAAATAATTTGTATAATATACTTAAAGAAAATAG TGAATTTAACATAAAAGCAAGGGTTAATAGTGAAGAAGAAGCTCTTTTAGAATTAGAGAAAATAAAGGTAGATATTATAT TTATAAATATTGAAATGCAGGTAGTGGAGTTTGTAGCTAAAGCACGTGAAATAAATGATAAGGTAAAGATTATTTTTATT ACTGCATATACAAAATACTCAAGTGATTCTAATATGCAGTATCTTATTAAGCCTGTAACCAAGGAAAAGCTTAATAAAGT TATTTTAAAACTTAAGCCTAACAATGAAAGTAAAAGTGAGGAGAGCTGGGATATAAAGGTTAGCTGTTTTGGTAAATTTA CAGTACAAAATAGACAAGGTACTATAGCTAAATGGATAACAAAGAAGGCTGAAGAATTATTTGCATTATTGATAGATCAA AAAGGAAAGGCTATAAATACAAATAAGATAATATATATGTTATGGAGGAATTTTGATACTACTAAAGCTACTGTAAATCT TCATACAACTGTGTACAATATAAAAAAAGCACTTTCAAGGCTTAATGCTCAAGAGGTTTTTATTTGTTCTGATGGATTTT ATAAAGTTGATGTAAGCAAAATTAAGTGTGATGTTTGGGAGGTTATTAGTAAAATCAGGACTATAAGTAGGCGAAATTTA ACTATAGATGAGGTTGGAGAAAGCATAAAAATTATTGAAGATGGTTATTTTAAGGAAAATTATTTCGATTGGGCAGAAGA TAAAAATAAGTATTTTGAAAGCGTGTATTTAAAGCTTATTTTTATAAAAGCAAAAGAGTGTAAAAAGAGTAGGAATTTTA ATGAGGCAATTGAACTTATAAGAATTGGACTTAAGGTGGATGAACTAAATGAGAGCTTTAATAAAGAGTTAATAAGGCTT TTAATGTTAGTTGGCGATGAAATTGAAGCTATAAAGCATTACAATTTTTATAAAAGAAAGTTAAGAAAAGAGCTTGGCAT AAACGTTGATTGTAAAATTTATGAATGGATAAAAAGCTAG
Upstream 100 bases:
>100_bases ATGGGTTTTGTTTATCAATTGGCATATTAGAAGCTTTATGGAAAATTGTAATATAATGTATGGTTTGCTATAATTGATAC TATTCAAATGGTGGAGGGAT
Downstream 100 bases:
>100_bases AAATTAAACTTTTTAAATACTATGTAAATATGGAGGTATGTAATAATGAGACATAGCAAACTAAAGGATTTTCCAAAAGA TTTTCTTTGGAGTGCATCAA
Product: response regulator
Products: NA
Alternate protein names: Response Regulator Receiver/SARP Domain-Containing Protein; Two-Component Response Regulator; Response Regulator; Response Regulatory Protein; Two Component Response Regulator; Two-Component Response Regulator VirR; Response Regulator In Two-Component Regulatory System; Response Regulator Receiver And Sarp Domain Protein
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MGMISAIIVDNEVLSANNLYNILKENSEFNIKARVNSEEEALLELEKIKVDIIFINIEMQVVEFVAKAREINDKVKIIFI TAYTKYSSDSNMQYLIKPVTKEKLNKVILKLKPNNESKSEESWDIKVSCFGKFTVQNRQGTIAKWITKKAEELFALLIDQ KGKAINTNKIIYMLWRNFDTTKATVNLHTTVYNIKKALSRLNAQEVFICSDGFYKVDVSKIKCDVWEVISKIRTISRRNL TIDEVGESIKIIEDGYFKENYFDWAEDKNKYFESVYLKLIFIKAKECKKSRNFNEAIELIRIGLKVDELNESFNKELIRL LMLVGDEIEAIKHYNFYKRKLRKELGINVDCKIYEWIKS
Sequences:
>Translated_359_residues MGMISAIIVDNEVLSANNLYNILKENSEFNIKARVNSEEEALLELEKIKVDIIFINIEMQVVEFVAKAREINDKVKIIFI TAYTKYSSDSNMQYLIKPVTKEKLNKVILKLKPNNESKSEESWDIKVSCFGKFTVQNRQGTIAKWITKKAEELFALLIDQ KGKAINTNKIIYMLWRNFDTTKATVNLHTTVYNIKKALSRLNAQEVFICSDGFYKVDVSKIKCDVWEVISKIRTISRRNL TIDEVGESIKIIEDGYFKENYFDWAEDKNKYFESVYLKLIFIKAKECKKSRNFNEAIELIRIGLKVDELNESFNKELIRL LMLVGDEIEAIKHYNFYKRKLRKELGINVDCKIYEWIKS >Mature_358_residues GMISAIIVDNEVLSANNLYNILKENSEFNIKARVNSEEEALLELEKIKVDIIFINIEMQVVEFVAKAREINDKVKIIFIT AYTKYSSDSNMQYLIKPVTKEKLNKVILKLKPNNESKSEESWDIKVSCFGKFTVQNRQGTIAKWITKKAEELFALLIDQK GKAINTNKIIYMLWRNFDTTKATVNLHTTVYNIKKALSRLNAQEVFICSDGFYKVDVSKIKCDVWEVISKIRTISRRNLT IDEVGESIKIIEDGYFKENYFDWAEDKNKYFESVYLKLIFIKAKECKKSRNFNEAIELIRIGLKVDELNESFNKELIRLL MLVGDEIEAIKHYNFYKRKLRKELGINVDCKIYEWIKS
Specific function: Unknown
COG id: COG3947
COG function: function code T; Response regulator containing CheY-like receiver and SARP domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42035; Mature: 41904
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMISAIIVDNEVLSANNLYNILKENSEFNIKARVNSEEEALLELEKIKVDIIFINIEMQ CCCEEEEEECCCEECCHHHHHHHHCCCCEEEEEEECCHHHHHHHHEEEEEEEEEEEEHHH VVEFVAKAREINDKVKIIFITAYTKYSSDSNMQYLIKPVTKEKLNKVILKLKPNNESKSE HHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEECHHHHHHCEEEEEECCCCCCCCC ESWDIKVSCFGKFTVQNRQGTIAKWITKKAEELFALLIDQKGKAINTNKIIYMLWRNFDT CCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCC TKATVNLHTTVYNIKKALSRLNAQEVFICSDGFYKVDVSKIKCDVWEVISKIRTISRRNL CEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHCCC TIDEVGESIKIIEDGYFKENYFDWAEDKNKYFESVYLKLIFIKAKECKKSRNFNEAIELI CHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEHHHHCCCCHHHHHHHH RIGLKVDELNESFNKELIRLLMLVGDEIEAIKHYNFYKRKLRKELGINVDCKIYEWIKS HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCC >Mature Secondary Structure GMISAIIVDNEVLSANNLYNILKENSEFNIKARVNSEEEALLELEKIKVDIIFINIEMQ CCEEEEEECCCEECCHHHHHHHHCCCCEEEEEEECCHHHHHHHHEEEEEEEEEEEEHHH VVEFVAKAREINDKVKIIFITAYTKYSSDSNMQYLIKPVTKEKLNKVILKLKPNNESKSE HHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEECHHHHHHCEEEEEECCCCCCCCC ESWDIKVSCFGKFTVQNRQGTIAKWITKKAEELFALLIDQKGKAINTNKIIYMLWRNFDT CCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCC TKATVNLHTTVYNIKKALSRLNAQEVFICSDGFYKVDVSKIKCDVWEVISKIRTISRRNL CEEEEEEEHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHCCC TIDEVGESIKIIEDGYFKENYFDWAEDKNKYFESVYLKLIFIKAKECKKSRNFNEAIELI CHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEHHHHCCCCHHHHHHHH RIGLKVDELNESFNKELIRLLMLVGDEIEAIKHYNFYKRKLRKELGINVDCKIYEWIKS HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA